Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nicotiana_20tabacum_20[refseq_20GCF_5F000715135.1_202014-05-29] 168,247 sequences; 3,643,471,356 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq73353 178 4e-39 seq58966 163 8e-35 seq138865 159 1e-33 seq154018 150 5e-31 seq42040 147 6e-30 seq25841 141 3e-28 seq37634 136 1e-26 seq31953 134 4e-26 seq7581 131 5e-25 seq104443 125 2e-23 seq90921 120 9e-22 seq3570 120 9e-22 seq125627 113 1e-19 seq134287 104 7e-17 seq14639 100 8e-16 seq134228 96.9 1e-14 seq102859 96.9 1e-14 seq166794 87.8 5e-12 >seq73353 Length=20824 Score = 178 bits (196), Expect = 4e-39 Identities = 332/471 (70%), Gaps = 24/471 (5%) Strand=Plus/Plus Query 288891 ATCGGCTCTGTTTGTTGCTGCCAATACAACAATAGATTCGG--TTTGCTTAAATCC-ATC 288947 ||| | ||| |||||||| ||||| ||||||| | | | ||| | ||| || ||| Sbjct 9170 ATCTGGTCTATTTGTTGCAGCCAA---AACAATAACTCCAGAATTTCCAGAAAACCCATC 9226 Query 288948 CATACTTGTTAAAATTTGATTAAGTGTTTGTTCCCTTTCATCATTTGAACCTCTTGAATC 289007 ||| ||| || | |||||||| || || ||||| ||||||||| ||||| || | Sbjct 9227 CATTTCTGTCAACAGTTGATTAATAGTCTGCTCCCTCTCATCATTTCCACCTCC--AAGC 9284 Query 289008 ACCCGAATCGCTCCtttttttACCAACAGCATCAATTTCGTCAATGAAAATCACACACGG 289067 || | | ||| || || |||||||||||||| || ||||| || | | ||| || Sbjct 9285 -CCTGC--CCCTCTTTGCCTT-CCAACAGCATCAATCTCATCAATAAACACAATACAAGG 9340 Query 289068 AGAATTTTGTCT-CGCAATTGCAAATAATTCTCTTACACGGGATGCTCCAAGACCAACAT 289126 | ||| | || ||| | |||| || || ||||| | || ||||| | ||| ||| Sbjct 9341 CGC-TTTCGACTTCGCCTTCTCAAACAAATCCCTTACTCTAGAAGCTCCCACACCGACAA 9399 Query 289127 ACATTTCTACAAATTCAGAAGCGGATACTTGA-ATGAATGTTACATTTGCTTCGCCTGCT 289185 ||| || ||||| || || || | || ||| | |||| ||| ||| || || ||| Sbjct 9400 ACAACTCAACAAACTCTGATGCTGC-ACATGAGAAAAATGGCACACCTGCCTCACCAGCT 9458 Query 289186 ACTGCCCTCGCCAGAAGTGTCTTACCTGTTCCAGGTGGTCCCTCTAATAGAACTCCCTTT 289245 ||||| || |||| |||||||||||| || |||||||||||| |||| ||| || ||| Sbjct 9459 ACTGCTCTAGCCAAAAGTGTCTTACCAGTGCCAGGTGGTCCCACTAAAAGACACCCTTTT 9518 Query 289246 GGTACTTTTGCCCC---AGCAGACTTATATTTCTCAGGGCTCTTTAAAAATTCTACAATT 289302 |||| || || || ||||| ||||||| ||||| | || || || || |||| | Sbjct 9519 GGTATCTTAGCACCTAAAGCAG---TATATTTATCAGGATTTTTCAAGAAATCAACAACT 9575 Query 289303 TCCT-CAAGTTCATATTTTGCCTCATCACATCCTGCTACATCAGCAAAAGT 289352 || | ||| | || | || |||| |||| || || ||||||||||| || Sbjct 9576 TCTTGCAACTCCA-ACTTGGCCTGATCAGCACCAGCAACATCAGCAAATGT 9625 >seq58966 Length=79355 Score = 163 bits (180), Expect = 8e-35 Identities = 289/415 (70%), Gaps = 6/415 (1%) Strand=Plus/Plus Query 288938 TAAATCCATCCATACTTGTTAAAATTTGATTAAGTGTTTGTTCCCTTTCATCATTTGAAC 288997 |||| |||||||| || | || ||| |||||||| || || |||||||||||| || Sbjct 42494 TAAAACCATCCATTTCAGTGAGAAGTTGGTTAAGTGTCTGCTCTCTTTCATCATTTCCAC 42553 Query 288998 CTCTTGAATCACCCGAATCGCTCCtttttttACCAACAGCATCAATTTCGTCAATGAAAA 289057 | | ||| ||| | || ||| ||| | |||||||||||||| || ||||| || | Sbjct 42554 CACC--AAT-ACCAGT-TC-CTC-TTTGCCTCCCAACAGCATCAATCTCATCAATAAAGA 42607 Query 289058 TCACACACGGAGAATTTTGTCTCGCAATTGCAAATAATTCTCTTACACGGGATGCTCCAA 289117 | ||| || |||||||| | || | ||||| || || || | || ||||| | Sbjct 42608 CTAAACAAGGTGAATTTTGCTTTGCCTTGTTGAATAAGTCCCTAACTCTAGAAGCTCCCA 42667 Query 289118 GACCAACATACATTTCTACAAATTCAGAAGCGGATACTTGAATGAATGTTACATTTGCTT 289177 ||||||| |||| || || || || ||| | || | | ||| | || | ||||| Sbjct 42668 CACCAACAAACATCTCAACGAACTCTGAACCAGAGAGAGATAAGAACGGAACCTCTGCTT 42727 Query 289178 CGCCTGCTACTGCCCTCGCCAGAAGTGTCTTACCTGTTCCAGGTGGTCCCTCTAATAGAA 289237 | || || | ||| | || || | |||||| ||||| || ||||| || |||| |||| Sbjct 42728 CTCCGGCGATCGCCTTAGCTAGCAATGTCTTCCCTGTCCCTGGTGGCCCTACTAAGAGAA 42787 Query 289238 CTCCCTTTGGTACTTTTGCCCCAGCAGACTTATATTTCTCAGGGCTCTTTAAAAATTCTA 289297 |||||||||||| ||||||||| | | | | || || ||| | || || || || | Sbjct 42788 CTCCCTTTGGTATCTTTGCCCCAACTGCAGCAAACTTTTCTGGGGTTTTCAAGAACTCAA 42847 Query 289298 CAATTTCCTCAAGTTCATATTTTGCCTCATCACATCCTGCTACATCAGCAAAAGT 289352 |||| || | || || | ||||| ||||| ||| || |||||| |||| || Sbjct 42848 CAATCTCTTGAAAATCTTGCTTTGCATCATCTACTCCAGCCACATCATCAAATGT 42902 >seq138865 Length=42912 Score = 159 bits (176), Expect = 1e-33 Identities = 287/413 (69%), Gaps = 6/413 (1%) Strand=Plus/Plus Query 288940 AATCCATCCATACTTGTTAAAATTTGATTAAGTGTTTGTTCCCTTTCATCATTTGAACCT 288999 || |||||||| || | || ||| |||||||| || || |||||||||||| ||| Sbjct 26168 AAACCATCCATTTCAGTGAGAAGTTGGTTAAGTGTCTGCTCTCTTTCATCATTTCCACCG 26227 Query 289000 CTTGAATCACCCGAATCGCTCCtttttttACCAACAGCATCAATTTCGTCAATGAAAATC 289059 | ||| ||| | || ||| ||| | |||||||||||||| || ||||| || | Sbjct 26228 CC--AAT-ACCAGT-TC-CTC-TTTGCCTCCCAACAGCATCAATCTCATCAATAAAGACT 26281 Query 289060 ACACACGGAGAATTTTGTCTCGCAATTGCAAATAATTCTCTTACACGGGATGCTCCAAGA 289119 | ||| || ||||||| | || | ||||| || || || | || ||||| | | Sbjct 26282 AAACAAGGTGAATTTTCCTTTGCCTTGTTGAATAAGTCCCTAACTCTAGAAGCTCCCACA 26341 Query 289120 CCAACATACATTTCTACAAATTCAGAAGCGGATACTTGAATGAATGTTACATTTGCTTCG 289179 |||||| |||| || ||||| || ||| | || | | ||||| || | |||||| Sbjct 26342 CCAACAAACATCTCAACAAACTCTGAACCAGAGAGAGATAAGAATGGAACCTCTGCTTCT 26401 Query 289180 CCTGCTACTGCCCTCGCCAGAAGTGTCTTACCTGTTCCAGGTGGTCCCTCTAATAGAACT 289239 || || | ||| | || || | |||||| ||||| || ||||| || |||| |||||| Sbjct 26402 CCGGCAATCGCCTTAGCTAGCAATGTCTTCCCTGTCCCTGGTGGCCCTACTAAGAGAACT 26461 Query 289240 CCCTTTGGTACTTTTGCCCCAGCAGACTTATATTTCTCAGGGCTCTTTAAAAATTCTACA 289299 |||||||||| ||||||||| | | | | || || ||| | || || || || ||| Sbjct 26462 CCCTTTGGTATCTTTGCCCCAACTGCTGCAAACTTTTCTGGGGTTTTCAAGAACTCAACA 26521 Query 289300 ATTTCCTCAAGTTCATATTTTGCCTCATCACATCCTGCTACATCAGCAAAAGT 289352 || || | || || | ||||| ||||| || || |||||| |||| || Sbjct 26522 ATCTCTTGAAAATCTTGCTTTGCATCATCTACCCCAGCCACATCATCAAATGT 26574 >seq154018 Length=23313 Score = 150 bits (166), Expect = 5e-31 Identities = 326/471 (69%), Gaps = 24/471 (5%) Strand=Plus/Plus Query 288891 ATCGGCTCTGTTTGTTGCTGCCAATACAACAATAGATTCGG--TTTGCTTA-AATCCATC 288947 ||| | ||| |||||||| ||||| ||| ||| | | | ||| | | || ||||| Sbjct 12135 ATCTGGTCTATTTGTTGCAGCCAA---AACTATAACTCCAGAATTTCCAGAGAACCCATC 12191 Query 288948 CATACTTGTTAAAATTTGATTAAGTGTTTGTTCCCTTTCATCATTTGAACCTCTTGAATC 289007 ||| ||| || | ||||||| || || || || ||||||||| ||||| || | Sbjct 12192 CATTTCTGTCAAGAGCTGATTAATAGTCTGCTCTCTCTCATCATTTCCACCTCC--AAGC 12249 Query 289008 ACCCGAATCGCTCCtttttttACCAACAGCATCAATTTCGTCAATGAAAATCACACACGG 289067 || | | ||| || || |||||||||||||| || ||||| || | | ||| || Sbjct 12250 -CCTGC--CCCTCTTTGCCTT-CCAACAGCATCAATCTCATCAATAAACACAATACAAGG 12305 Query 289068 AGAATTTTGTCT-CGCAATTGCAAATAATTCTCTTACACGGGATGCTCCAAGACCAACAT 289126 | ||| | || ||| | |||| || || ||||| | || ||||| | ||| ||| Sbjct 12306 CGC-TTTCGACTTCGCCTTCTCAAACAAATCCCTTACTCTAGAAGCTCCCACACCCACAA 12364 Query 289127 ACATTTCTACAAATTCAGAAGCGGATACTTGA-ATGAATGTTACATTTGCTTCGCCTGCT 289185 ||| || ||||| || || || | || ||| | |||| ||| ||| || || ||| Sbjct 12365 ACAACTCAACAAACTCTGATGCTGC-ACATGAGAAAAATGGCACACCTGCCTCACCAGCT 12423 Query 289186 ACTGCCCTCGCCAGAAGTGTCTTACCTGTTCCAGGTGGTCCCTCTAATAGAACTCCCTTT 289245 ||||| || |||| ||| |||||||| || |||||||||||| | || ||| || ||| Sbjct 12424 ACTGCTCTAGCCAAAAGGGTCTTACCAGTACCAGGTGGTCCCACCAAAAGACACCCTTTT 12483 Query 289246 GGTACTTTTGCCCC---AGCAGACTTATATTTCTCAGGGCTCTTTAAAAATTCTACAATT 289302 |||| || || || ||||| |||| || ||||| | || || || || |||| | Sbjct 12484 GGTATCTTAGCACCTAAAGCAG---TATACTTATCAGGATTTTTCAAGAAATCAACAACT 12540 Query 289303 TCCT-CAAGTTCATATTTTGCCTCATCACATCCTGCTACATCAGCAAAAGT 289352 || | ||| | || | || |||| |||| || || ||||||||||| || Sbjct 12541 TCTTGCAACTCCA-ACTTGGCCTGATCAGCACCAGCAACATCAGCAAATGT 12590 >seq42040 Length=32045 Score = 147 bits (162), Expect = 6e-30 Identities = 287/416 (69%), Gaps = 10/416 (2%) Strand=Plus/Plus Query 288939 AAATCCATCCATACTTGTTAAAATTTGATTAAGTGTTTGTTCCCTTTCATCATTTGAACC 288998 ||| |||||||| || || | |||||||| || || || || |||||||| ||| Sbjct 5558 AAACCCATCCATTTCAGTCAAGAGTTGATTAATAGTCTGCTCTCTCTCATCATTCCCACC 5617 Query 288999 TCTTGAATCACCCGAATCGCTCCtttttttACCAACAGCATCAATTTCGTCAATGAAAAT 289058 || || || | | | ||| | | || ||||||||||| || ||||| || | Sbjct 5618 TCCC--ATT-CCTGCACCTCTC---TGCCTCCCCACAGCATCAATCTCATCAATAAACAC 5671 Query 289059 CACACACGGAGAATTTTGTCT-CGCAATTGCAAATAATTCTCTTACACGGGATGCTCCAA 289117 | || || | ||| | || ||| | | || || || || || | || ||||||| Sbjct 5672 AATGCAAGGCGC-TTTCGACTTCGCCTTCTCGAACAAATCCCTCACTCTAGAAGCTCCAA 5730 Query 289118 GACCAACATACATTTCTACAAATTCAGAAGCGGATACTTGA-ATGAATGTTACATTTGCT 289176 ||||||| ||| || ||||| || || || | || ||| | |||| |||| ||| Sbjct 5731 CACCAACAAACAACTCAACAAACTCTGATGCTGC-ACATGAGAAAAATGGTACACCAGCT 5789 Query 289177 TCGCCTGCTACTGCCCTCGCCAGAAGTGTCTTACCTGTTCCAGGTGGTCCCTCTAATAGA 289236 || || || ||||| || |||| ||||||||| ||||| |||||||||||| | || ||| Sbjct 5790 TCACCAGCAACTGCTCTAGCCAAAAGTGTCTTTCCTGTACCAGGTGGTCCCACCAAAAGA 5849 Query 289237 ACTCCCTTTGGTACTTTTGCCCCAGCAGACTTATATTTCTCAGGGCTCTTTAAAAATTCT 289296 || ||||||| ||| || || || |||| || ||||| |||||||||| || Sbjct 5850 CACCCTTTTGGTATTTTAGCACCTAAAGCTGTATACTTATCAGGATTCTTTAAAAAATCA 5909 Query 289297 ACAATTTCCTCAAGTTCATATTTTGCCTCATCACATCCTGCTACATCAGCAAAAGT 289352 || | ||| | | || |||| || | |||| || || |||||||||||||| Sbjct 5910 ACCACTTCTTGTAACTCCAATTTAGCTTGATCAGCACCAGCAACATCAGCAAAAGT 5965 >seq25841 Length=135519 Score = 141 bits (156), Expect = 3e-28 Identities = 286/418 (68%), Gaps = 16/418 (4%) Strand=Plus/Plus Query 288939 AAATCCATCCATACTTGTTAAAATTTGATTAAGTGTTTGTTCCCTTTCATCATTTGAACC 288998 ||| |||||||| || || | |||||||| || || || || |||||||| ||| Sbjct 101642 AAAACCATCCATTTCAGTCAAGAGTTGATTAATAGTCTGCTCTCTCTCATCATTCCCACC 101701 Query 288999 TC---TTGAATCACCCGAATCGCTCCtttttttACCAACAGCATCAATTTCGTCAATGAA 289055 || || |||| || || | || || ||||||||||| || ||||| || Sbjct 101702 TCCCATTCCTGCACC----TCTCTGCCTT-----CCCACAGCATCAATCTCATCAATAAA 101752 Query 289056 AATCACACACGGAGAATTTTGTCT-CGCAATTGCAAATAATTCTCTTACACGGGATGCTC 289114 | | || || | ||| | || ||| | | || || || || || | || |||| Sbjct 101753 CACAATGCAAGGCGC-TTTCGACTTCGCCTTCTCGAACAAATCCCTCACTCTAGAAGCTC 101811 Query 289115 CAAGACCAACATACATTTCTACAAATTCAGAAGCGGATACTTGA-ATGAATGTTACATTT 289173 ||| ||||||| ||| || ||||| || || | | || ||| | |||| |||| Sbjct 101812 CAACACCAACAAACAACTCAACAAACTCTGATGGTGC-ACATGAGAAAAATGGTACACCA 101870 Query 289174 GCTTCGCCTGCTACTGCCCTCGCCAGAAGTGTCTTACCTGTTCCAGGTGGTCCCTCTAAT 289233 ||||| || || ||||| || |||| ||||||||| ||||| |||||||||||| | || Sbjct 101871 GCTTCACCAGCAACTGCTCTAGCCAAAAGTGTCTTTCCTGTACCAGGTGGTCCCACCAAA 101930 Query 289234 AGAACTCCCTTTGGTACTTTTGCCCCAGCAGACTTATATTTCTCAGGGCTCTTTAAAAAT 289293 ||| || ||||||| ||| || || || |||| || ||||| |||||||||| Sbjct 101931 AGACACCCTTTTGGTATTTTAGCACCTAAAGCTGTATACTTATCAGGATTCTTTAAAAAA 101990 Query 289294 TCTACAATTTCCTCAAGTTCATATTTTGCCTCATCACATCCTGCTACATCAGCAAAAG 289351 || || | ||| | | || |||| || | |||| || || ||||||||||||| Sbjct 101991 TCAACTACTTCTTGTAACTCCAATTTAGCTTGATCAGCACCAGCAACATCAGCAAAAG 102048 >seq37634 Length=100709 Score = 136 bits (150), Expect = 1e-26 Identities = 220/314 (70%), Gaps = 2/314 (1%) Strand=Plus/Plus Query 302565 CATAATGTCTTCCATACTCTTGATTAAACGACGCTGAATATAACCAGTTGTAGATGTTTT 302624 ||| || || ||||| ||| | ||| || | ||| || || ||||| ||| ||||| Sbjct 2275 CATGATATCCTCCATGGCCTTCACTAATCGCCTCTGGATGTACCCAGTCTCAGAAGTTTT 2334 Query 302625 TACAGCTGTATCAATTAGACCAACACGACCACCCATAGCATGGAAGAATAGCTCTTCCGG 302684 ||||| |||||||||||||| | | ||||||||||||||| ||||| | ||| | ||| Sbjct 2335 CACAGCAGTATCAATTAGACCTTCTCTACCACCCATAGCATGAAAGAAGAACTCCTGCGG 2394 Query 302685 TCGTAGCCCCCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGGGCGAATCGTCGAA 302744 || |||| | | | || |||| || |||||||| || || || || Sbjct 2395 GGTCAGTCCCCGGAGATATGAATTCTCCACAAAACCACGACTTTCTGGACCATAATCATC 2454 Query 302745 CTTGGTAAAGTGTGGCAGGGTCCTGT-TCTCATAGCCGTATGGGATACGCTTTCCATCAA 302803 ||||||||| || || || || | || | | | | || | || ||||| || || |||| Sbjct 2455 CTTGGTAAAATGAGGTAGAGTACGGTCTATGA-ACCCAAAAGGAATACGTTTCCCTTCAA 2513 Query 302804 CGTTCTGCTGTCCCAGGCACGAAATCATCTGCGAAATATTTAAATCACTGCCCTTGGAGC 302863 | ||||| || |||| || | | |||| || || || || | | ||| |||||||| | Sbjct 2514 CATTCTGTTGCCCCACACAAGCAGTCATTTGAGATATGTTAATAAAACTTCCCTTGGACC 2573 Query 302864 CAGCATTTACCATA 302877 ||||| | |||||| Sbjct 2574 CAGCAGTAACCATA 2587 >seq31953 Length=221314 Score = 134 bits (148), Expect = 4e-26 Identities = 184/257 (72%), Gaps = 0/257 (0%) Strand=Plus/Minus Query 251404 GCGATAAGACCACACTTATTACACACATGGACGCTGTAAGCATCAGATGCGTCATATAGC 251463 || || || |||||| | ||| ||||| || || || |||||| | |||| ||| | Sbjct 200574 GCAATCAGCCCACACCGCTCACAAACATGAACTCTATATGCATCACTTTGGTCAAATAAC 200515 Query 251464 CGACCCTTGGTGAAGCGAGATGCACCGTGTGAAATCATACAATCACGCTCCATTTCACCG 251523 || | ||| || ||| |||||||| | |||||||||||| ||||||||||| ||| Sbjct 200514 CGCTCTTTGAGAAAATGAGCAGCACCGTGAGCAATCATACAATCTCGCTCCATTTCCCCG 200455 Query 251524 AAACGAAGACCACCATCGCGAGCCCTACCCTCGGCAGGCTGACGAGTGAGATTAACCATA 251583 ||||||||||||||||| || | || ||| || |||||||| | ||||| | || | Sbjct 200454 AAACGAAGACCACCATCACGTGACCGACCTTCCGCAGGCTGCCTTGTGAGGATTTGCACA 200395 Query 251584 GGACCGATGGAGCGGCTATGTTGCTTATCATTTACCATATGCTTGAGACGCTGGTAGAAT 251643 || || || | ||| ||| |||| ||||| ||||| || | ||||||| | Sbjct 200394 GGGCCTCTGCCTCTAGAATGAATCTTGTCATCAACCATGTGCTTCAGTCTCTGGTAGTAC 200335 Query 251644 GCGGGACCGATGAAGAT 251660 | |||||| | ||| || Sbjct 200334 GTGGGACCAAGGAATAT 200318 Score = 86.0 bits (94), Expect = 2e-11 Identities = 67/79 (85%), Gaps = 1/79 (1%) Strand=Plus/Minus Query 233262 AAAATGTTGTAGCACCGTGAGCAATCATACAATCACGTTCCATTTCACCAATACGCAGAC 233321 |||||| | |||||||||||||||||||||||| || |||||||| || | ||| |||| Sbjct 200503 AAAATGA-GCAGCACCGTGAGCAATCATACAATCTCGCTCCATTTCCCCGAAACGAAGAC 200445 Query 233322 CACCATCATTTGACCTACC 233340 |||||||| ||||| ||| Sbjct 200444 CACCATCACGTGACCGACC 200426 >seq7581 Length=31056 Score = 131 bits (144), Expect = 5e-25 Identities = 219/314 (70%), Gaps = 2/314 (1%) Strand=Plus/Plus Query 302565 CATAATGTCTTCCATACTCTTGATTAAACGACGCTGAATATAACCAGTTGTAGATGTTTT 302624 ||| || || ||||| ||| | ||| || | ||| || || || || ||| ||||| Sbjct 2296 CATGATATCCTCCATGGCCTTCACTAATCGCCTCTGGATGTACCCGGTCTCAGAAGTTTT 2355 Query 302625 TACAGCTGTATCAATTAGACCAACACGACCACCCATAGCATGGAAGAATAGCTCTTCCGG 302684 ||||| |||||||||||||| | | ||||||||||||||||||||| | ||| | || Sbjct 2356 CACAGCAGTATCAATTAGACCTTCTCTACCACCCATAGCATGGAAGAAGAACTCCTGAGG 2415 Query 302685 TCGTAGCCCCCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGGGCGAATCGTCGAA 302744 || |||| | | | || |||| || |||||||| || || || || Sbjct 2416 GGTCAGTCCCCGGAGATATGAATTCTCCACAAAACCACGACTTTCTGGACCATAATCATC 2475 Query 302745 CTTGGTAAAGTGTGGCAGGGTCCTGT-TCTCATAGCCGTATGGGATACGCTTTCCATCAA 302803 ||||||||| || || || || | || | | | | || | || ||||| || || |||| Sbjct 2476 CTTGGTAAAATGAGGTAGAGTACGGTCTATGA-ACCCAAAAGGAATACGTTTCCCTTCAA 2534 Query 302804 CGTTCTGCTGTCCCAGGCACGAAATCATCTGCGAAATATTTAAATCACTGCCCTTGGAGC 302863 | ||||| || |||| || | | |||| || || || || | | ||| |||||||| | Sbjct 2535 CATTCTGTTGCCCCACACAAGCAGTCATTTGAGATATGTTAATAAAACTCCCCTTGGACC 2594 Query 302864 CAGCATTTACCATA 302877 ||||| | |||||| Sbjct 2595 CAGCAGTAACCATA 2608 >seq104443 Length=69982 Score = 125 bits (138), Expect = 2e-23 Identities = 170/237 (72%), Gaps = 0/237 (0%) Strand=Plus/Minus Query 251424 ACACACATGGACGCTGTAAGCATCAGATGCGTCATATAGCCGACCCTTGGTGAAGCGAGA 251483 ||| ||||| || || || |||||| | |||| ||| ||| | ||| || ||| Sbjct 12665 ACAAACATGAACTCTATATGCATCACTTTGGTCAAATAACCGCTCTTTGAGAAAATGAGC 12606 Query 251484 TGCACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAACGAAGACCACCATCGCG 251543 |||||||| | |||||||||||| |||||||| || ||||| |||||||||||||| || Sbjct 12605 AGCACCGTGAGCAATCATACAATCTCGCTCCATCTCTCCGAATCGAAGACCACCATCACG 12546 Query 251544 AGCCCTACCCTCGGCAGGCTGACGAGTGAGATTAACCATAGGACCGATGGAGCGGCTATG 251603 | || ||| || |||||||| | ||||| | || ||| || || | ||| Sbjct 12545 TGACCGACCTTCCGCAGGCTGCCTTGTGAGGATTTGCACAGGGCCTCTGCCTCTAGAATG 12486 Query 251604 TTGCTTATCATTTACCATATGCTTGAGACGCTGGTAGAATGCGGGACCGATGAAGAT 251660 ||| |||| ||||| ||||| || ||||||||| | | |||||| | ||| || Sbjct 12485 AATCTTGTCATCAACCATGTGCTTCAGTCGCTGGTAGTACGTGGGACCAAGGAATAT 12429 >seq90921 Length=83348 Score = 120 bits (132), Expect = 9e-22 Identities = 283/417 (68%), Gaps = 14/417 (3%) Strand=Plus/Plus Query 288940 AATCCATCCATACTTGTTAAAATTTGATTAAGTGTTTGTTCCCTTTCATCATTTGAACCT 288999 || |||||||| || || | ||| || || || ||||||||||||||||| ||| Sbjct 75576 AAACCATCCATTTCCGTCAATAGTTGGTTCAGGGTCTGTTCCCTTTCATCATTCCCTCCT 75635 Query 289000 CTTGAATCACCCGAATCGCTCCtttttttACCAACAGCATCAATTTCGTCAATGAAAATC 289059 | ||| | | || ||| ||| ||||||||||||||||| |||| || | Sbjct 75636 CC--AATTCC---AGTCCCTC-TTTGCCGCCCAACAGCATCAATTTCATCAACAAATACA 75689 Query 289060 ACACACGGAGAATTTTGTCTCGCAAT--TGCAAATAATTCTCTTACACGGGATGCTCCAA 289117 | || |||| ||||| | || | || ||| | || | || || || ||||| | Sbjct 75690 ATGCAGGGAGCATTTTCCTTGGCCTTCTTGAAAAGA--TCGCGGACTCGAGAGGCTCCTA 75747 Query 289118 GACCAACATACATTTCTACAAATTCAGAAGCGGATACTTGA-ATGAATGTTACATTTGCT 289176 ||||||| |||| || |||||||| ||| | || | |||| | |||| ||| ||| Sbjct 75748 CACCAACAAACATCTCAACAAATTCTGAACCTGAAA-TTGAGAAAAATGGAACACCCGCT 75806 Query 289177 TCGCCTGCTACTGCCCTCGCCAGAAGTGTCTTACCTGTTCCAGGTGGTCCCTCTAATAGA 289236 || || || | |||| | || || || || || || || ||||| || || | | ||| Sbjct 75807 TCACCAGCAATTGCCTTTGCTAGCAGGGTTTTCCCAGTACCAGGAGGACCAACAAGAAGA 75866 Query 289237 ACTCCCTTTGGTACTTTTGCCCCAGCAGACTTATATTTCTCAGGGCTCTTTAAAAATTCT 289296 || || ||||| | ||||| | | || | |||| || |||| ||||||||| Sbjct 75867 ACACCTTTTGGAATACGAGCCCCCACTGCGGTAAACCTCTCGGGCTTCTTCAAAAATTCT 75926 Query 289297 ACAATTTCCTCAAGTTCATATTTTGCCTCATC-ACATCCTGCTACATCAGCAAAAGT 289352 || | ||| || || | |||||||||||| ||| || || |||||| |||| || Sbjct 75927 ACTACCTCCATAAAATCTTGTTTTGCCTCATCTACA-CCAGCAACATCATCAAACGT 75982 >seq3570 Length=110709 Score = 120 bits (132), Expect = 9e-22 Identities = 283/417 (68%), Gaps = 14/417 (3%) Strand=Plus/Minus Query 288940 AATCCATCCATACTTGTTAAAATTTGATTAAGTGTTTGTTCCCTTTCATCATTTGAACCT 288999 || |||||||| || || | ||| || || || ||||||||||||||||| ||| Sbjct 53315 AAACCATCCATTTCCGTCAATAGTTGGTTCAGGGTCTGTTCCCTTTCATCATTCCCTCCT 53256 Query 289000 CTTGAATCACCCGAATCGCTCCtttttttACCAACAGCATCAATTTCGTCAATGAAAATC 289059 | ||| | | || ||| ||| ||||||||||||||||| |||| || | Sbjct 53255 CC--AATTCC---AGTCCCTC-TTTGCCGCCCAACAGCATCAATTTCATCAACAAATACA 53202 Query 289060 ACACACGGAGAATTTTGTCTCGCAAT--TGCAAATAATTCTCTTACACGGGATGCTCCAA 289117 | || |||| ||||| | || | || ||| | || | || || || ||||| | Sbjct 53201 ATGCAGGGAGCATTTTCCTTGGCCTTCTTGAAAAGA--TCACGGACTCGAGAGGCTCCTA 53144 Query 289118 GACCAACATACATTTCTACAAATTCAGAAGCGGATACTTGA-ATGAATGTTACATTTGCT 289176 ||||||| |||| || |||||||| ||| | || | |||| | |||| ||| ||| Sbjct 53143 CACCAACAAACATCTCAACAAATTCTGAACCTGAAA-TTGAGAAAAATGGAACACCCGCT 53085 Query 289177 TCGCCTGCTACTGCCCTCGCCAGAAGTGTCTTACCTGTTCCAGGTGGTCCCTCTAATAGA 289236 || || || | |||| | || || || ||||| || || ||||| || || | | ||| Sbjct 53084 TCACCAGCAATTGCCTTTGCTAGCAGGGTCTTCCCAGTACCAGGAGGACCAACAAGAAGA 53025 Query 289237 ACTCCCTTTGGTACTTTTGCCCCAGCAGACTTATATTTCTCAGGGCTCTTTAAAAATTCT 289296 || || ||||| | ||||| | | || | |||| || |||| ||||||||| Sbjct 53024 ACACCTTTTGGAATACGAGCCCCCACTGCGGTAAACCTCTCGGGCTTCTTCAAAAATTCT 52965 Query 289297 ACAATTTCCTCAAGTTCATATTTTGCCTCATC-ACATCCTGCTACATCAGCAAAAGT 289352 || | ||| || || | |||||| ||||| ||| || || |||||| |||| || Sbjct 52964 ACGACCTCCATAAAATCTTGTTTTGCTTCATCTACA-CCAGCAACATCATCAAATGT 52909 >seq125627 Length=10463 Score = 113 bits (124), Expect = 1e-19 Identities = 324/483 (67%), Gaps = 29/483 (6%) Strand=Plus/Minus Query 288874 AATGCTGGGTCTAATATATCGGCTCTGTTTGTTGCTGCCAATACAACAATA---GATTCG 288930 || ||| |||||||||||| | ||| ||||| | || | |||||| | ||| | Sbjct 5761 AAGGCTTTGTCTAATATATCAGGTCTATTTGTGCCAGCAAGTACAACCACGCCTGATGTG 5702 Query 288931 GTTTGCTTAAATCCATCCATACTTGTTAAA--ATTTGATT--AAGTGTTTGTTCCCTTTC 288986 ||| || ||| || ||||| || || | |||||| ||||| || || | ||| Sbjct 5701 GTT-GC--AAAACCGTCCAT--TTCAACAAGCAGTTGATTTAAAGTGCTT--TCACGTTC 5649 Query 288987 ATCATTTGAACCTCTTGAAT---CACCCGAATCGCTC-CtttttttACCAACAGCATCAA 289042 ||||| | |||| ||| ||||| ||| | ||| | ||||| ||||||| Sbjct 5648 ATCATGT---CCTCCAGAAAAGCCACCC----CGCCCTCTTGCTCGACCAATGGCATCAA 5596 Query 289043 TTTCGTCAATGAAAATCACACACGGAGAATTTTGTCTCGCAATTGCAAATAATTCTCTTA 289102 | || ||||||||||| | || || | | |||| || |||||| || | Sbjct 5595 TCTCATCAATGAAAATTATACTAGGTGCACACTGTCGTGCCTCCTGAAATAAGCTCCTAA 5536 Query 289103 CACGGGATGCTCCAAGACCAACATACATTTCTACAAATTCAGAAGCGGATACTTGAATGA 289162 | | || || ||||| ||||||| |||| || | ||| || || | || | | ||| || Sbjct 5535 CTCTGGCTGGTCCAACACCAACAAACATCTCCATAAAATCTGACCCAGAAA-TAGAAAGA 5477 Query 289163 AT-GTTACATTTGCTTCGCCTGCTACTGCCCTCGCCAGAAGTGTCTTACCTGTTCCAGGT 289221 | | |||| | || || ||| || | || ||||||||||| || || ||||| Sbjct 5476 AAAGGTACACCAGACTCTCCAGCTGTAGCTTTGGCAAGAAGTGTCTTTCCAGTCCCAGGA 5417 Query 289222 GGTCCCTCTAATAGAACTCCCTTTGGTACTTTTGC-CCCAGCAGACTTATATTTCTCAGG 289280 || ||| ||| ||| | ||||| |||| ||| || |||||| | || |||||||| || Sbjct 5416 GGACCCACTAGAAGAGCACCCTTGGGTATTTTGGCTCCCAGCTG-CTCATATTTCTTGGG 5358 Query 289281 GCTCTTTAAAAATTCTACAATTTCCTCAAGTTCATATTTTGCCTCATCACATCCTGCTAC 289340 | | || | || | |||| ||| | ||| | ||||||||||||||||| || || Sbjct 5357 GTTTTTAAGGAAGTGGACAAACTCCATGATTTCTTGCTTTGCCTCATCACATCCAGCCAC 5298 Query 289341 ATC 289343 ||| Sbjct 5297 ATC 5295 >seq134287 Length=131680 Score = 104 bits (114), Expect = 7e-17 Identities = 322/483 (67%), Gaps = 29/483 (6%) Strand=Plus/Plus Query 288874 AATGCTGGGTCTAATATATCGGCTCTGTTTGTTGCTGCCAATACAACAATA---GATTCG 288930 || ||| |||||||||||| | ||| ||||| | || | |||||| | | ||| | Sbjct 113420 AAGGCTTTGTCTAATATATCAGGTCTATTTGTGCCAGCAAGTACAACCACACCTGATGTG 113479 Query 288931 GTTTGCTTAAATCCATCCATACTTGTTAAA--ATTTGATT--AAGTGTTTGTTCCCTTTC 288986 ||| || ||| || ||||| || || | |||||| ||||| || || | ||| Sbjct 113480 GTT-GC--AAAACCGTCCAT--TTCAACAAGCAGTTGATTTAAAGTGCTT--TCACGTTC 113532 Query 288987 ATCATTTGAACCTCTTGAAT---CACCCGAATCGCTC-CtttttttACCAACAGCATCAA 289042 ||||| | |||| ||| ||||| ||| | ||| | ||||| ||||||| Sbjct 113533 ATCATGT---CCTCCAGAAAAGCCACCC----CGCCCTCTTGCTCGACCAATGGCATCAA 113585 Query 289043 TTTCGTCAATGAAAATCACACACGGAGAATTTTGTCTCGCAATTGCAAATAATTCTCTTA 289102 | || ||||||||||| | || || | | |||| || |||||| || | Sbjct 113586 TCTCATCAATGAAAATTATACTAGGCGCACACTGTCGTGCCTCCTGAAATAAGCTCCTAA 113645 Query 289103 CACGGGATGCTCCAAGACCAACATACATTTCTACAAATTCAGAAGCGGATACTTGAATGA 289162 | | || || ||||| ||||||| |||| || | ||| || || | |||| | || || Sbjct 113646 CTCTGGCTGGTCCAACACCAACAAACATCTCCATAAAATCTGACCCAGATA-TAGAGAGA 113704 Query 289163 AT-GTTACATTTGCTTCGCCTGCTACTGCCCTCGCCAGAAGTGTCTTACCTGTTCCAGGT 289221 | | |||| | || || ||| || | || ||||||||||| || || ||||| Sbjct 113705 AAAGGTACACCAGACTCTCCAGCTGTAGCTTTGGCAAGAAGTGTCTTTCCAGTCCCAGGA 113764 Query 289222 GGTCCCTCTAATAGAACTCCCTTTGGTACTTTTGC-CCCAGCAGACTTATATTTCTCAGG 289280 || ||| ||| ||| | ||||| |||| ||| || |||| | | || |||||||| || Sbjct 113765 GGACCCACTAGAAGAGCACCCTTGGGTATTTTGGCTCCCAACTG-CTCATATTTCTTGGG 113823 Query 289281 GCTCTTTAAAAATTCTACAATTTCCTCAAGTTCATATTTTGCCTCATCACATCCTGCTAC 289340 | | || | || | || | ||| | ||| | |||||||| |||||||| || || Sbjct 113824 GTTTTTAAGGAAGTGGACGAACTCCATGATTTCTTGCTTTGCCTCGTCACATCCAGCCAC 113883 Query 289341 ATC 289343 ||| Sbjct 113884 ATC 113886 >seq14639 Length=118967 Score = 100 bits (110), Expect = 8e-16 Identities = 315/477 (66%), Gaps = 17/477 (4%) Strand=Plus/Minus Query 288874 AATGCTGGGTCTAATATATCGGCTCTGTTTGTTGCTGCCAATACAACAATA---GATTCG 288930 || ||| |||||||||||| | ||| ||||| | || | |||||| | | ||| | Sbjct 103567 AAGGCTTTGTCTAATATATCAGGTCTATTTGTGCCAGCAAGTACAACTACACCGGATGTG 103508 Query 288931 GTTTGCTTAAATCCATCCATACTTGTTAAA--ATTTGATTAAGTGTTTGTTCCCTTTCAT 288988 ||| || |||||||||||| || | || | |||||| | || || | ||||| Sbjct 103507 GTT-GC--AAATCCATCCAT--TTCTACAAGCAGTTGATTTAAAGTACTCTCACGTTCAT 103453 Query 288989 CATTTGAACCTCTTGAATCACC-CGAATCGCTCCtttttttACCAACAGCATCAATTTCG 289047 ||||| |||| | | || | || ||| || | ||||| ||||||||| || Sbjct 103452 CATTT---CCTCCAGCAAAGCCTCCCTTCCCTC-TTGCTCGACCAATAGCATCAATCTCA 103397 Query 289048 TCAATGAAAATCACACACGGAGAATTTTGTCTCGCAATTGCAAATAATTCTCTTACACGG 289107 |||||||| | | || || | | |||||| || |||||| || || | Sbjct 103396 TCAATGAATACTATACTAGGTGCACATTGTCTTGCCTCCTGAAATAAGCTCCTAACTCTA 103337 Query 289108 GATGCTCCAAGACCAACATACATTTCTACAAATTCAGAAGCGGATACTTGAATGAAT-GT 289166 |||| |||| ||||||| |||| || | |||||| || | || | | || ||| | Sbjct 103336 GATGGACCAACACCAACAAACATCTCCATAAATTCTGACCCAGAAA-TCGAGAGAAAAGG 103278 Query 289167 TACATTTGCTTCGCCTGCTACTGCCCTCGCCAGAAGTGTCTTACCTGTTCCAGGTGGTCC 289226 |||| | ||| |||||| || | || ||||||||||| || |||||||| || || Sbjct 103277 TACACCAGATTCTCCTGCTGTAGCTTTAGCTAGAAGTGTCTTTCCAGTTCCAGGAGGACC 103218 Query 289227 CTCTAATAGAACTCCCTTTGGTACTTTTGCCCCAGCAGACTTATATTTCTCAGGGCTCTT 289286 | ||| ||| | ||||| || | ||| || || || || |||| ||| |||| Sbjct 103217 CACTAGCAGAGCACCCTTAGGAATTTTGGCTCCTAACTCCTCGTACTTCTTGGGGTTCTT 103158 Query 289287 TAAAAATTCTACAATTTCCTCAAGTTCATATTTTGCCTCATCACATCCTGCTACATC 289343 | || | || | ||| | ||| | || ||||| |||||||| || ||||| Sbjct 103157 AAGGAAGTGGACGAACTCCATGATTTCTTGCTTAGCCTCGTCACATCCAGCCACATC 103101 >seq134228 Length=16504 Score = 96.9 bits (106), Expect = 1e-14 Identities = 200/296 (68%), Gaps = 15/296 (5%) Strand=Plus/Minus Query 288964 TGATTAAGTGTTTGTTCCCTTTCATCATTTGAACCTCTTGAATCACCCGAATCGCTCCtt 289023 ||||| | ||||| || ||||||||||| ||| ||| || ||| |||| Sbjct 15136 TGATTCAAAGTTTGGTCTCTTTCATCATT-GAAACTCCTG------CCG---CGCT---- 15091 Query 289024 tttttACCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAATTTTGTCTCGCA 289083 || ||||||||||||| ||| || |||||||| | |||||| ||| | ||| || Sbjct 15090 -TTCCTCCAACAGCATCAAGTTCATCGATGAAAATGATTGACGGAGCATTCTTTCTTGCT 15032 Query 289084 ATTGCAAATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAATTCA 289143 | ||| | ||||| | || | |||||| |||||| ||||||| ||||| ||| Sbjct 15031 ACGCTAAAAAGGTCTCTAATGCGAGCTGCTCCTCTTCCAACAAACATTTCAACAAACTCA 14972 Query 289144 GAAGCGGATACTTGAATGAATGTTACATTTGCTTCGCCTGCTACTGCCCTCGCCAGAAGT 289203 ||| || || || || | || |||||| ||||| ||||| | || || | Sbjct 14971 CTAGCAGAAACGGAAAAAAAGGGTAGTCCTGCTTCTCCTGCCACTGCACGAGCTAGTAAC 14912 Query 289204 GTCTTACCTGTTCCAGGTGGTCCCTCTAATAGAACTCCCTTTGGTACTTTTGCCCC 289259 || || ||||| |||||||| || | | || || || |||||| || ||||| Sbjct 14911 GTTTTTCCTGTGCCAGGTGGACCTACAAGCAGTACACCTCTTGGTAACTTCGCCCC 14856 >seq102859 Length=33503 Score = 96.9 bits (106), Expect = 1e-14 Identities = 314/477 (66%), Gaps = 17/477 (4%) Strand=Plus/Plus Query 288874 AATGCTGGGTCTAATATATCGGCTCTGTTTGTTGCTGCCAATACAACAATA---GATTCG 288930 || ||| |||||||||||| | ||| ||||| | || | |||||| | | ||| | Sbjct 9065 AAGGCTTTGTCTAATATATCAGGTCTATTTGTGCCAGCAAGTACAACTACACCGGATGTG 9124 Query 288931 GTTTGCTTAAATCCATCCATACTTGTTAAA--ATTTGATTAAGTGTTTGTTCCCTTTCAT 288988 ||| || |||||||||||| || | || | |||||| | || || | ||||| Sbjct 9125 GTT-GC--AAATCCATCCAT--TTCTACAAGCAGTTGATTTAAAGTACTCTCACGTTCAT 9179 Query 288989 CATTTGAACCTCTTGAATCACC-CGAATCGCTCCtttttttACCAACAGCATCAATTTCG 289047 ||||| |||| | | || | || ||| || | ||||| ||||||||| || Sbjct 9180 CATTT---CCTCCAGCAAAGCCTCCCTTCCCTC-TTGCTCGACCAATAGCATCAATCTCA 9235 Query 289048 TCAATGAAAATCACACACGGAGAATTTTGTCTCGCAATTGCAAATAATTCTCTTACACGG 289107 |||||||| | | || || | | |||||| || |||||| || || | Sbjct 9236 TCAATGAATACTATACTAGGTGCACATTGTCTTGCCTCCTGAAATAAGCTCCTAACTCTA 9295 Query 289108 GATGCTCCAAGACCAACATACATTTCTACAAATTCAGAAGCGGATACTTGAATGAAT-GT 289166 |||| |||| ||||||| |||| || | |||||| || | || | | || ||| | Sbjct 9296 GATGGACCAACACCAACAAACATCTCCATAAATTCTGACCCAGAAA-TCGAGAGAAAAGG 9354 Query 289167 TACATTTGCTTCGCCTGCTACTGCCCTCGCCAGAAGTGTCTTACCTGTTCCAGGTGGTCC 289226 |||| | ||| |||||| || | || ||||||||||| || |||||||| || || Sbjct 9355 TACACCAGATTCTCCTGCTGTAGCTTTAGCTAGAAGTGTCTTTCCAGTTCCAGGAGGACC 9414 Query 289227 CTCTAATAGAACTCCCTTTGGTACTTTTGCCCCAGCAGACTTATATTTCTCAGGGCTCTT 289286 | ||| ||| | || || || | ||| || || || || |||| || |||| Sbjct 9415 CACTAGCAGAGCACCTTTAGGAATTTTGGCTCCTAACTCCTCGTACTTCTTGGGATTCTT 9474 Query 289287 TAAAAATTCTACAATTTCCTCAAGTTCATATTTTGCCTCATCACATCCTGCTACATC 289343 | || | |||| ||| | ||| | || ||||| |||||||| || ||||| Sbjct 9475 AAGGAAGTGGACAAACTCCATGATTTCTTGCTTAGCCTCGTCACATCCAGCCACATC 9531 >seq166794 Length=50597 Score = 87.8 bits (96), Expect = 5e-12 Identities = 161/236 (68%), Gaps = 0/236 (0%) Strand=Plus/Plus Query 251404 GCGATAAGACCACACTTATTACACACATGGACGCTGTAAGCATCAGATGCGTCATATAGC 251463 || || | |||||| | | || ||||| || ||||||||||| | ||| | ||| Sbjct 19615 GCAATTAAACCACATTGCTGGCATACATGAACTCTGTAAGCATCGCTTTGATCAAACAGC 19674 Query 251464 CGACCCTTGGTGAAGCGAGATGCACCGTGTGAAATCATACAATCACGCTCCATTTCACCG 251523 | | ||| ||| | | || || || | |||||||| ||||||||||| || || Sbjct 19675 CTCTCTTTGAGGAAATGTGCAGCCCCATGAGCGATCATACAGTCACGCTCCATCTCCCCA 19734 Query 251524 AAACGAAGACCACCATCGCGAGCCCTACCCTCGGCAGGCTGACGAGTGAGATTAACCATA 251583 || || || || ||||| |||| || || || |||||||| | ||||||| | || | Sbjct 19735 AATCGTAGGCCTCCATCCCGAGATCTTCCTTCAGCAGGCTGTCTAGTGAGAATCTGCACA 19794 Query 251584 GGACCGATGGAGCGGCTATGTTGCTTATCATTTACCATATGCTTGAGACGCTGGTA 251639 ||||| || ||| |||||||| ||||| ||||| || | |||||| Sbjct 19795 GGACCACGACCACGAGAATGGATCTTATCATCCACCATGTGCTTCAGCCTCTGGTA 19850 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1468644854773239