Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nicotiana_20tomentosiformis_20[refseq_20GCF_5F000390325.2_202013-05- 16] 159,548 sequences; 1,688,466,321 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq113574 84.2 5e-11 >seq113574 Length=79877 Score = 84.2 bits (92), Expect = 5e-11 Identities = 115/161 (71%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 248782 CTGGACGGCGCGATTGACTACGGCAAAGATTTGGAGTACGATTTCTTTGCTTTCAAAACG 248841 |||||| | | ||| || | || ||| || || || |||| ||||| ||||||||| Sbjct 17717 CTGGACAGTGAGATCATATATGACAGAGACTTTGATTATGATTACTTTGGTTTCAAAACC 17658 Query 248842 CTGGAGAAATCGTATCTCCTCAAAATTGATGGCAAGATCGTGGAACGAATTCAGCACATG 248901 || |||| || || ||| | || ||| | || || | || ||| | || |||||| Sbjct 17657 CTTGAGAGGTCTTACCTCTTAAAGATTCAGGGTAAAGTTGTAGAAAGGCCACAACACATG 17598 Query 248902 TTGATGCGAGTGGCTGTCGGGATTCACAAGGATGACATAGA 248942 ||||| |||| |||| ||||| ||||||||||| || || Sbjct 17597 CTGATGAGAGTATCTGTTGGGATCCACAAGGATGATATTGA 17557 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1071571397329664