Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nicotiana_20tomentosiformis_20[refseq_20GCF_5F000390325.2_202013-05- 16] 159,548 sequences; 1,688,466,321 total letters Query= NC_004690.1 Length=113220 Score E Sequences producing significant alignments: (Bits) Value seq73737 111 1e-19 seq35257 109 4e-19 seq102184 104 2e-17 seq91242 100 2e-16 seq67887 98.7 7e-16 seq62100 95.1 9e-15 seq2656 93.3 3e-14 seq11802 91.5 1e-13 seq87509 89.7 4e-13 seq51332 89.7 4e-13 seq68600 87.8 1e-12 seq60369 87.8 1e-12 seq110773 84.2 2e-11 >seq73737 Length=23676 Score = 111 bits (122), Expect = 1e-19 Identities = 162/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 15135 TGCCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGC 15194 ||||||| ||||| || | ||| | ||||||||||| || || || ||||| ||||| Sbjct 14144 TGCCACCCCTCAACCTGAGAACAAGGTGAAGGGTGGATTCCTTCTGGATGTTATAATCAG 14203 Query 15195 TTAGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTG 15254 ||| |||| | ||||||||||| || ||||| | ||||| | || || || || Sbjct 14204 CCAGAGTTCTTCCATCTTCTAATTGCTTCCCAGCAAAAATCAACCTCTGCTGATCAGGTG 14263 Query 15255 GAATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTA 15314 | || || || ||||| |||||| ||| ||| | ||||| || || | || | Sbjct 14264 GGATACCCTCCTTGTCTTGAATTTTAGCCTTAACATTGTCTATCGTGTCCGAGCTCTCAA 14323 Query 15315 CATCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15363 | || || || || ||||| || || | || || |||||||||||||| Sbjct 14324 CCTCCAACGTGATTGTTTTTCCAGTTAAGGTCTTAACAAAAATTTGCAT 14372 Score = 87.8 bits (96), Expect = 1e-12 Identities = 141/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 15161 TGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCTAATTGT 15220 ||||| || || || ||||| || |||||||| ||| | | | | || || | ||| Sbjct 14626 TGAAGTGTCGACTCCTTTTGAATATTGTAATCTGCGAGAGTACGCCCATCCTCGAGCTGT 14685 Query 15221 TTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAAATTTTG 15280 || || || | |||||||||||||| || |||||| ||||||||||| |||||| Sbjct 14686 TTTCCTGCAAAGATCAAACGTTGTTGATCTGGTGGAATACCTTCTTTGTCCTGGATTTTG 14745 Query 15281 CTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTACCTGTC 15340 || ||| | || || || || | | || || || | || || || || || ||| Sbjct 14746 GCTTTAACATTGTCGATCGTGTCTGAACTCTCAACTTCGAGAGTTATAGTCTTGCCAGTC 14805 Query 15341 AGAGTTTTTACAAAAATTTGCAT 15363 || || || ||||| || ||||| Sbjct 14806 AGGGTCTTCACAAAGATCTGCAT 14828 >seq35257 Length=66376 Score = 109 bits (120), Expect = 4e-19 Identities = 170/243 (70%), Gaps = 0/243 (0%) Strand=Plus/Plus Query 15135 TGCCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGC 15194 |||||||||||||||| | ||| | |||||||| || || || || ||||| ||||| Sbjct 1256 TGCCACCTCTCAATCTGAGAACAAGGTGAAGGGTAGATTCCTTCTGGATGTTATAATCAG 1315 Query 15195 TTAGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTG 15254 || |||| | ||||||||||| || |||||| | |||| | || ||||| | Sbjct 1316 CCAGCGTTCTTCCATCTTCTAATTGCTTCCCAGCGAAAATCAGCCTCTGCTGGTCTGGCG 1375 Query 15255 GAATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTA 15314 | || ||||| || || ||||| ||| ||| | || || || || | || | Sbjct 1376 GGATACCTTCCTTATCTTGGATTTTCGCCTTAACATTATCAATTGTGTCTGAGCTCTCAA 1435 Query 15315 CATCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATATTTGAAAATA 15374 | || || ||||||||||| || || | ||||| ||||| || ||||| | | |||| Sbjct 1436 CTTCCAATGTAATGGTTTTTCCAGTTAAGGTTTTAACAAAGATCTGCATCTGTATTAATA 1495 Query 15375 AAA 15377 ||| Sbjct 1496 AAA 1498 >seq102184 Length=23720 Score = 104 bits (114), Expect = 2e-17 Identities = 148/206 (72%), Gaps = 2/206 (1%) Strand=Plus/Plus Query 15160 ATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCTAATTG 15219 ||| |||||||| || || || ||||||||||| ||| |||| | ||||| | ||| Sbjct 2167 ATGGAGGGTGGACTCCTTCTGGATGTTGTAATCAGCAAGAGTTCTACCATCTTCAAGTTG 2226 Query 15220 TTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAAAT-TT 15278 |||||||| | ||||| | |||||| || ||||| || || ||||| || || Sbjct 2227 CTTGCCAGCAAAAATCAACCTTTGTTGATCAGGAGGAATACCCTCCTTGTCCTGGATCTT 2286 Query 15279 TGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTACCTG 15338 ||| ||| ||| | || ||||| || | || || || | ||||| || || || | Sbjct 2287 TGC-CTTGACATTGTCAATGGTGTCTGAGCTCTCGACCTCAAGCGTAATAGTCTTTCCAG 2345 Query 15339 TCAGAGTTTTTACAAAAATTTGCATA 15364 |||| ||||| ||||| ||||||||| Sbjct 2346 TCAGGGTTTTGACAAAGATTTGCATA 2371 Score = 98.7 bits (108), Expect = 7e-16 Identities = 162/231 (70%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 15135 TGCCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGC 15194 |||||||||| | | | ||| | ||| ||||| || ||||| || ||||||||||| Sbjct 1914 TGCCACCTCTAAGACGAAGAACAAGATGCAGGGTTGACTCTTTCTGAATGTTGTAATCTG 1973 Query 15195 TTAGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTG 15254 | | ||| |||| || | ||| || || || | |||| | || ||||| | Sbjct 1974 CCAATGTCCTCCCGTCCTCAAGTTGCTTCCCGGCAAAGATCAGTCTCTGCTGGTCCGGAG 2033 Query 15255 GAATTCCTTCTTTGTCACAAAT-TTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCT 15313 |||| ||||| ||||| ||| |||||| |||||| | || || ||||| | |||| Sbjct 2034 GAATACCTTCCTTGTCTTGAATCTTTGCT-TTTACATTGTCGATAGTATCTGAACTTTCA 2092 Query 15314 ACATCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364 || || | ||| ||||| || || || || || || ||||| || |||||| Sbjct 2093 ACTTCAAGGGTGATGGTCTTGCCGGTAAGTGTCTTGACAAAGATCTGCATA 2143 >seq91242 Length=50504 Score = 100 bits (110), Expect = 2e-16 Identities = 144/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 15161 TGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCTAATTGT 15220 ||||||||||| || ||||| |||||||| ||| ||| | | | || |||| || Sbjct 25135 TGAAGGGTGGATTCCTTTTGGATGTTGTAGTCGGCAAGAGTGCGGCCATCCTCTAGCTGC 25194 Query 15221 TTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAAATTTTG 15280 || ||||| | ||||| | || || ||| || |||||||| ||||| ||| || Sbjct 25195 TTTCCAGCAAAGATCAACCTCTGCTGATCGGGAGGGATTCCTTCCTTGTCCTGAATCTTA 25254 Query 15281 CTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTACCTGTC 15340 ||| ||| | || || || ||| | | || || || | ||||||||||| || || Sbjct 25255 GCCTTGACATTATCAATAGTGTCGGAACTCTCAACCTCGAGAGTAATGGTTTTTCCGGTA 25314 Query 15341 AGAGTTTTTACAAAAATTTGCAT 15363 || || |||||||| |||||||| Sbjct 25315 AGCGTCTTTACAAAGATTTGCAT 25337 Score = 91.5 bits (100), Expect = 1e-13 Identities = 142/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 15161 TGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCTAATTGT 15220 ||||||||||| || || || |||||||| ||| ||| | | | | || || | || Sbjct 24907 TGAAGGGTGGACTCCTTCTGAATGTTGTAGTCGGCAAGAGTGCACCCATCCTCAAGCTGC 24966 Query 15221 TTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAAATTTTG 15280 || ||||| | ||||| | || ||||| || || ||||| ||||| || || Sbjct 24967 TTTCCAGCAAAGATCAACCTCTGCTGGTCTGGAGGGATGCCTTCCTTGTCCTGGATCTTC 25026 Query 15281 CTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTACCTGTC 15340 ||| ||| | || ||||| ||| || || || || | ||| ||||| || || ||| Sbjct 25027 GCCTTAACATTGTCAATGGTGTCGGAGTTCTCAACCTCAAGGGTGATGGTCTTCCCAGTC 25086 Query 15341 AGAGTTTTTACAAAAATTTGCAT 15363 | |||||||||||||| ||||| Sbjct 25087 AATGTTTTTACAAAAATCTGCAT 25109 >seq67887 Length=198949 Score = 98.7 bits (108), Expect = 7e-16 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 15155 ACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCT 15214 || || || || ||||| || ||||| |||||||||||| ||| ||| ||||||| Sbjct 190973 ACCAAGTGGAGAGTGGACTCCTTTTGAATGTTGTAATCGGCGAGAGTTCGGCCGTCTTCC 191032 Query 15215 AATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAA 15274 || || || || || | ||||| | || || || ||| |||||||| ||||| | Sbjct 191033 AACTGCTTTCCGGCAAAGATCAACCTCTGCTGATCTGGTGGGATTCCTTCCTTGTCCTGA 191092 Query 15275 ATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTA 15334 || || ||| || | || || || || |||| || || | |||||| ||||| Sbjct 191093 ATCTTCGCCTTAACGTTGTCAATTGTGTCAGAGCTTTCCACTTCAAGGGTAATTGTTTTC 191152 Query 15335 CCTGTCAGAGTTTTTACAAAAATTTGCAT 15363 || || || ||||| ||||| |||||||| Sbjct 191153 CCAGTTAGGGTTTTGACAAAGATTTGCAT 191181 Score = 93.3 bits (102), Expect = 3e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 15155 ACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCT 15214 || || |||||||| || || || || |||||||| ||| ||| |||| ||||||| Sbjct 191201 ACCAAGTGAAGGGTCGATTCCTTCTGGATGTTGTAGTCGGCTAGGGTTCTGCCGTCTTCG 191260 Query 15215 AATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAA 15274 | || || || ||| | |||| | ||| ||||| ||| |||||||||||||| | Sbjct 191261 AGCTGCTTTCCGGCGAAGATCAGCCTTTGCTGGTCCGGTGGGATTCCTTCTTTGTCCTGA 191320 Query 15275 ATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTA 15334 || || ||| || | || || || ||| |||| || || | ||| ||||| || Sbjct 191321 ATCTTAGCCTTAACGTTGTCAATAGTGTCGGAGCTTTCAACCTCAAGGGTTATGGTCTTT 191380 Query 15335 CCTGTCAGAGTTTTTACAAAAATTTGCAT 15363 || || | ||||| || || || ||||| Sbjct 191381 CCAGTTAAGGTTTTAACGAAGATCTGCAT 191409 Score = 87.8 bits (96), Expect = 1e-12 Identities = 146/211 (69%), Gaps = 0/211 (0%) Strand=Plus/Plus Query 15154 AACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTC 15213 ||| || |||||||| || || || || ||||||||||| || ||| ||||||| Sbjct 190744 AACCAAGTGAAGGGTAGACTCCTTCTGGATGTTGTAATCAGCGAGGGTTCGGCCGTCTTC 190803 Query 15214 TAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACA 15273 | ||| || || || | |||| | ||| ||||| ||| ||||| ||||| || Sbjct 190804 AAGTTGCTTTCCGGCAAAGATCAGCCTTTGCTGGTCTGGTGGGATTCCCTCTTTATCCTG 190863 Query 15274 AATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTT 15333 ||||| ||| || | || || || ||| |||| || || | ||| || ||||| Sbjct 190864 GATTTTCGCCTTAACGTTATCAATAGTGTCGGAGCTTTCAACTTCAAGGGTGATTGTTTT 190923 Query 15334 ACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364 || || || ||||| || || ||||||||| Sbjct 190924 CCCGGTTAGGGTTTTGACGAAGATTTGCATA 190954 Score = 82.4 bits (90), Expect = 6e-11 Identities = 142/204 (70%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 15161 TGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCTAATTGT 15220 || |||||||| || || || ||||||||||| || ||| | ||||| ||||| Sbjct 190295 TGCAGGGTGGACTCCTTCTGAATGTTGTAATCAGCGAGGGTTCGTCCATCTTCCAATTGC 190354 Query 15221 TTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAAAT-TTT 15279 || || || | |||| | || || || ||||| || || ||||| ||| || Sbjct 190355 TTTCCCGCAAAGATCAGCCTCTGCTGATCCGGGGGAATACCCTCCTTGTCCTGAATCTTA 190414 Query 15280 GCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTACCTGT 15339 ||| || ||| | || || ||||| | |||| || || || || |||||||| || || Sbjct 190415 GCT-TTCACATTGTCAATAGTATCAGAACTTTCCACCTCCAAAGTGATGGTTTTCCCGGT 190473 Query 15340 CAGAGTTTTTACAAAAATTTGCAT 15363 || || || |||||||| ||||| Sbjct 190474 CAACGTCTTCACAAAAATCTGCAT 190497 >seq62100 Length=87079 Score = 95.1 bits (104), Expect = 9e-15 Identities = 148/209 (71%), Gaps = 2/209 (1%) Strand=Plus/Plus Query 15160 ATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCTAATTG 15219 ||| |||||||| || || || |||||||| || ||| ||| | || || | || Sbjct 33754 ATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCTAGTGTTCGGCCATCCTCAAGCTG 33813 Query 15220 TTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAAATTTT 15279 || || ||| | ||||| || || ||||| |||||| ||||| ||||| ||| || Sbjct 33814 CTTACCTGCGAAAATCAACCGCTGCTGGTCCGGTGGAATGCCTTCCTTGTCCTGAATCTT 33873 Query 15280 GCTCTTTACAATTTCTATGGTATCGCTATTT-TCTACATCTAAGGTAATGGTTTTACCTG 15338 ||| ||| | || ||||| || | || ||||| ||||||||||| || || || | Sbjct 33874 AGCCTTAACATTGTCAATGGTGTC-CGATGACTCTACCTCTAAGGTAATAGTCTTCCCCG 33932 Query 15339 TCAGAGTTTTTACAAAAATTTGCATATTT 15367 |||| || || || || || ||||| ||| Sbjct 33933 TCAGGGTCTTCACGAATATCTGCATCTTT 33961 >seq2656 Length=23473 Score = 93.3 bits (102), Expect = 3e-14 Identities = 148/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 15155 ACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCT 15214 || ||||||||||| || || || || || |||||||| || | || | || || Sbjct 20024 ACCAAATGAAGGGTTGATTCCTTCTGAATATTGTAATCTGCAAGGGTCCTTCCATCCTCA 19965 Query 15215 AATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAA 15274 | |||||| ||||| ||||||| | || ||||| ||||| || || ||||| Sbjct 19964 AGTTGTTTCCCAGCAAATATCAACCTCTGCTGGTCTGGAGGAATACCCTCCTTGTCCTGG 19905 Query 15275 AT-TTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTT 15333 || ||||| ||||||| | || |||||||| | || || || | ||| || || || Sbjct 19904 ATCTTTGC-CTTTACATTGTCGATGGTATCTGAGCTCTCAACTTCAAGGGTGATCGTCTT 19846 Query 15334 ACCTGTCAGAGTTTTTACAAAAATTTGCAT 15363 || || | |||||| |||||||| ||||| Sbjct 19845 GCCCGTTAAAGTTTTAACAAAAATCTGCAT 19816 Score = 87.8 bits (96), Expect = 1e-12 Identities = 141/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 15161 TGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCTAATTGT 15220 |||||||| || || ||||| || |||||||| ||| ||| | ||||| | || Sbjct 19562 TGAAGGGTTGACTCCTTTTGAATATTGTAATCAGCAAGAGTTCGGCCATCTTCAAGCTGC 19503 Query 15221 TTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAAATTTTG 15280 || ||||| | |||| | || ||||| ||||| ||||| ||||| ||||||| Sbjct 19502 TTTCCAGCAAAGATCAGCCTCTGCTGGTCTGGGGGAATCCCTTCCTTGTCTTGAATTTTG 19443 Query 15281 CTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTACCTGTC 15340 ||| || | || || || || | | || || || | ||||||||||| || || Sbjct 19442 GCCTTCACGTTATCAATTGTGTCTGAACTCTCAACCTCGAGAGTAATGGTTTTTCCAGTG 19383 Query 15341 AGAGTTTTTACAAAAATTTGCAT 15363 || || |||||||| || ||||| Sbjct 19382 AGTGTCTTTACAAAGATCTGCAT 19360 >seq11802 Length=78489 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196 ||||| |||| | | || ||||| ||||| || || || || ||||| ||||| | Sbjct 56299 CCACCCCTCAGGCGCAGCACCAAATGGAGGGTTGATTCCTTCTGGATGTTATAATCAGCT 56358 Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256 | | | || | || || | ||||| ||||| | ||||| | || ||||| ||| Sbjct 56359 AAAGTCCTTCCATCCTCAAGCTGTTTACCAGCAAAAATCAACCTCTGCTGGTCAGGTGGG 56418 Query 15257 ATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACA 15316 || ||||| || || |||||| ||| ||| | || ||||| || | || || Sbjct 56419 ATCCCTTCCTTATCTTGAATTTTAGCCTTGACATTGTCGATGGTGTCCGAGCTCTCAACC 56478 Query 15317 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364 || | |||||||||||| ||||| | || || ||||| ||||||||| Sbjct 56479 TCAAGGGTAATGGTTTTCCCTGTTAATGTCTTCACAAAGATTTGCATA 56526 Score = 86.0 bits (94), Expect = 5e-12 Identities = 158/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196 ||||| |||| || | || | ||| || ||||| || || || || ||||| || Sbjct 56755 CCACCCCTCAGCCTCAGCACCAGATGGAGAGTGGATTCCTTCTGAATATTGTAGTCAGCA 56814 Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256 || | | | || || | ||| || |||||| | ||||| | || || || ||| Sbjct 56815 AGGGTACGACCATCCTCAAGTTGCTTTCCAGCGAAGATCAACCTCTGCTGATCTGGAGGA 56874 Query 15257 ATTCCTTCTTTGTCACAAATTTT-GCTCTTTACAATTTCTATGGTATCGCTATTTTCTAC 15315 || |||||||| || ||||| ||| || ||| | || || |||||| | | || || Sbjct 56875 ATGCCTTCTTTATCCTGGATTTTAGCT-TTGACATTGTCAATTGTATCGGAACTCTCAAC 56933 Query 15316 ATCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364 || | ||||| || || ||||||| |||||||||||| || |||||| Sbjct 56934 CTCAAGTGTAATAGTCTTTCCTGTCAAAGTTTTTACAAAGATCTGCATA 56982 Score = 86.0 bits (94), Expect = 5e-12 Identities = 143/204 (70%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 15161 TGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCTAATTGT 15220 || ||||| || || ||||| || ||||| || ||| ||| | || ||||| || Sbjct 57235 TGGAGGGTAGACTCCTTTTGGATATTGTAGTCAGCAAGAGTTCGGCCATCCTCTAACTGC 57294 Query 15221 TTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAAAT-TTT 15279 || ||||| | ||||| | ||| || || ||||||||||| || || || ||| Sbjct 57295 TTTCCAGCAAAGATCAACCTTTGCTGATCTGGAGGAATTCCTTCCTTATCTTGGATCTTT 57354 Query 15280 GCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTACCTGT 15339 || ||| ||| | || || || || | | || || || | ||| |||||||| || || Sbjct 57355 GC-CTTAACATTGTCGATAGTGTCTGAACTCTCAACCTCGAGGGTGATGGTTTTGCCAGT 57413 Query 15340 CAGAGTTTTTACAAAAATTTGCAT 15363 || || |||||||| |||||||| Sbjct 57414 GAGGGTCTTTACAAAGATTTGCAT 57437 >seq87509 Length=10540 Score = 89.7 bits (98), Expect = 4e-13 Identities = 144/207 (70%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 15160 ATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCTAATTG 15219 |||||| || || || || || |||||||||||| ||| ||| |||| || | || Sbjct 1265 ATGAAGAGTCGACTCCTTCTGGATGTTGTAATCGGCTAGGGTTCGGCCGTCCTCGAGCTG 1206 Query 15220 TTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAAATTTT 15279 || || ||| | |||| ||| || ||||| ||||||||||| ||||| || || Sbjct 1205 CTTTCCGGCGAAAATCAGACGCTGCTGGTCTGGGGGAATTCCTTCCTTGTCTTGGATCTT 1146 Query 15280 GCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTACCTGT 15339 | || ||| | || || || ||| | ||| || || | || || |||||||| || Sbjct 1145 GGCTTTCACATTGTCGATTGTGTCGGAAGATTCAACCTCAAGTGTGATTGTTTTACCCGT 1086 Query 15340 CAGAGTTTTTACAAAAATTTGCATATT 15366 || ||||| || || || ||||| || Sbjct 1085 TAGGGTTTTGACGAAGATCTGCATCTT 1059 >seq51332 Length=333 Score = 89.7 bits (98), Expect = 4e-13 Identities = 139/199 (70%), Gaps = 0/199 (0%) Strand=Plus/Minus Query 15135 TGCCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGC 15194 |||||||||||||||| | ||| | |||||||| || || || || ||||| ||||| Sbjct 199 TGCCACCTCTCAATCTGAGAACAAGGTGAAGGGTAGATTCCTTCTGGATGTTATAATCAG 140 Query 15195 TTAGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTG 15254 || |||| | ||||||||||| || |||||| | |||| | || ||||| | Sbjct 139 CCAGCGTTCTTCCATCTTCTAATTGCTTCCCAGCGAAAATCAGCCTCTGCTGGTCTGGCG 80 Query 15255 GAATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTA 15314 | || ||||| || || ||||| ||| ||| | || || || || | || | Sbjct 79 GGATACCTTCCTTATCTTGGATTTTCGCCTTAACATTATCAATTGTGTCTGAGCTCTCAA 20 Query 15315 CATCTAAGGTAATGGTTTT 15333 | || || ||||||||||| Sbjct 19 CTTCCAATGTAATGGTTTT 1 >seq68600 Length=37585 Score = 87.8 bits (96), Expect = 1e-12 Identities = 147/212 (69%), Gaps = 3/212 (1%) Strand=Plus/Plus Query 15152 AAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCT 15211 || || | ||| || ||||| || || || || |||||||| || |||| | ||| Sbjct 35096 AACACAAGATGGAGAGTGGAGTCCTTCTGAATATTGTAATCAGCAAGTATTCGACCATCT 35155 Query 15212 TCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCA 15271 || | |||||| ||||| | || || | |||||| || ||||||||||| ||||| Sbjct 35156 TCAAGTTGTTTTCCAGCAAAAATTAACCTTTGTTGATCTGGAGGAATTCCTTCCTTGTCT 35215 Query 15272 CAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTT 15331 |||||| | || ||| | || || || ||| || || || | |||||||| Sbjct 35216 TGAATTTTTGTTTTAACATTGTCAATAGTGTCGGAGTT---AACCTCGAGTGTAATGGTC 35272 Query 15332 TTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15363 || || || || || || ||||| |||||||| Sbjct 35273 TTTCCAGTTAGTGTCTTAACAAAGATTTGCAT 35304 >seq60369 Length=529 Score = 87.8 bits (96), Expect = 1e-12 Identities = 141/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 15161 TGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCTAATTGT 15220 || || || || || ||||| || |||||||| ||| | | | || || | ||| Sbjct 411 TGGAGCGTTGACTCCTTTTGAATATTGTAATCCGCGAGAGTCCGTCCATCCTCGAGCTGT 352 Query 15221 TTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAAATTTTG 15280 || || || | |||||||||||||| || |||||| ||||| || || |||||| Sbjct 351 TTTCCTGCAAAGATCAAACGTTGTTGATCTGGTGGAATACCTTCCTTATCTTGGATTTTG 292 Query 15281 CTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTACCTGTC 15340 ||| ||| | || || || || |||| || || || || || || || || ||| Sbjct 291 GCCTTAACATTATCAATCGTGTCCGAGCTTTCGACTTCCAATGTGATTGTCTTCCCAGTC 232 Query 15341 AGAGTTTTTACAAAAATTTGCAT 15363 | ||||| |||||||||||||| Sbjct 231 AAGGTTTTAACAAAAATTTGCAT 209 >seq110773 Length=86849 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 15155 ACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCT 15214 || || |||||||| || || || || |||||||||||| || | | | || || Sbjct 42140 ACCAAGTGAAGGGTAGACTCCTTCTGAATGTTGTAATCGGCGAGGGTACGGCCATCCTCG 42199 Query 15215 AATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAA 15274 | || ||||| ||| | ||||| | || ||||| ||||| || || || || | Sbjct 42200 AGCTGCTTGCCGGCGAAGATCAACCTCTGCTGGTCTGGAGGAATGCCCTCCTTATCCTGA 42259 Query 15275 ATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTA 15334 |||||| ||| ||| | || |||||||| | | || || || | ||| || ||||| Sbjct 42260 ATTTTGGCCTTGACATTATCGATGGTATCAGAACTCTCGACCTCAAGGGTGATTGTTTTG 42319 Query 15335 CCTGTCAGAGTTTTTACAAAAATTTGCAT 15363 || || || ||||| || || || ||||| Sbjct 42320 CCGGTGAGGGTTTTGACGAAGATCTGCAT 42348 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 15155 ACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCT 15214 || || |||||||| || || || || |||||||||||| || | | | || || Sbjct 42368 ACCAAGTGAAGGGTAGACTCCTTCTGAATGTTGTAATCGGCGAGGGTACGGCCATCCTCG 42427 Query 15215 AATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAA 15274 | || ||||| ||| | ||||| | || ||||| ||||| || || || || | Sbjct 42428 AGCTGCTTGCCGGCGAAGATCAACCTCTGCTGGTCTGGAGGAATGCCCTCCTTATCCTGA 42487 Query 15275 ATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTA 15334 |||||| ||| ||| | || |||||||| | | || || || | ||| || ||||| Sbjct 42488 ATTTTGGCCTTGACATTATCGATGGTATCAGAACTCTCGACCTCAAGGGTGATTGTTTTG 42547 Query 15335 CCTGTCAGAGTTTTTACAAAAATTTGCAT 15363 || || || ||||| || || || ||||| Sbjct 42548 CCGGTGAGGGTTTTGACGAAGATCTGCAT 42576 Score = 84.2 bits (92), Expect = 2e-11 Identities = 153/224 (68%), Gaps = 0/224 (0%) Strand=Plus/Plus Query 15155 ACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCT 15214 || || |||||||| || || || || |||||||||||| ||| | | |||| || Sbjct 42596 ACCAAGTGAAGGGTAGATTCCTTCTGGATGTTGTAATCGGCGAGAGTACGGCCGTCCTCA 42655 Query 15215 AATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAA 15274 | || ||||| ||| | || | | ||| || || ||||||||||| ||||| Sbjct 42656 AGCTGCTTGCCGGCGAAGATAAGCCTTTGCTGATCTGGGGGAATTCCTTCCTTGTCCTGG 42715 Query 15275 ATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTA 15334 |||||| ||||| | || || || ||| | | || || || | || ||||| || Sbjct 42716 ATTTTGGCTTTTACGTTGTCGATTGTGTCGGAACTCTCGACCTCGAGAGTTATGGTCTTT 42775 Query 15335 CCTGTCAGAGTTTTTACAAAAATTTGCATATTTGAAAATAAAAT 15378 || || || ||||| || || || ||||| | | || ||| ||| Sbjct 42776 CCGGTAAGGGTTTTCACGAAGATCTGCATCTGTAAATATATAAT 42819 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 361474945714668