Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nicotiana_20tomentosiformis_20[refseq_20GCF_5F000390325.2_202013-05- 16] 159,548 sequences; 1,688,466,321 total letters Query= NC_006966.1 Length=166259 Score E Sequences producing significant alignments: (Bits) Value seq75959 114 1e-20 >seq75959 Length=145061 Score = 114 bits (126), Expect = 1e-20 Identities = 123/160 (77%), Gaps = 2/160 (1%) Strand=Plus/Plus Query 21472 CAAACATGCAAAATCACAATGCAAACCTTCATCCCTACTTATTAATTCATTAGAAAATGT 21531 |||||| ||||||||||| ||||||||||| ||||| || || || || || || || Sbjct 63333 CAAACAAGCAAAATCACAGTGCAAACCTTCGTCCCTTGAAATCAACTCGTTCGAGAAGGT 63392 Query 21532 TAAACCGGGCATTAATCCTCTCTTTTTTAACCAAAATATTGACGCAAATGC-TCCTGAAA 21590 ||| || |||||||| || | |||||||||||| ||||| | | || | || ||| || | Sbjct 63393 TAATCCAGGCATTAACCCCCGCTTTTTTAACCAGAATATAG-CACAGAAGCTTCCAGAGA 63451 Query 21591 AGAAAATGCCCTCAACGGCAGCAAATGCAACTAATCGTTC 21630 | ||||| || || || |||||||||||| || || || Sbjct 63452 AAAAAATACCTTCCACACAAGCAAATGCAACCAAACGCTC 63491 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 530840003639520