Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nicotiana_20tomentosiformis_20[refseq_20GCF_5F000390325.2_202013-05- 16] 159,548 sequences; 1,688,466,321 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq73737 140 8e-28 seq67887 140 8e-28 seq87509 132 1e-25 seq2656 132 1e-25 seq91242 129 1e-24 seq35257 129 1e-24 seq60369 127 5e-24 seq110773 120 7e-22 seq11802 120 7e-22 seq62100 113 1e-19 seq103126 100 7e-16 seq51332 95.1 3e-14 seq82140 91.5 3e-13 seq75959 86.0 1e-11 >seq73737 Length=23676 Score = 140 bits (154), Expect = 8e-28 Identities = 170/230 (74%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305 |||||| ||||| | ||| || || |||| || || ||||| ||||| || || || Sbjct 14601 TCCACCACGGAGGCGAAGAACAAGGTGAAGTGTCGACTCCTTTTGAATATTGTAATCTGC 14660 Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365 ||| || || || || || | ||||||||||| ||||||| ||| |||||| ||| Sbjct 14661 GAGAGTACGCCCATCCTCGAGCTGTTTTCCTGCAAAGATCAAACGTTGTTGATCTGGTGG 14720 Query 288366 GATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT-- 288423 || |||||||| ||||||||||| ||||| || || || || | | || | ||| Sbjct 14721 AATACCTTCTTTGTCCTGGATTTTGGCTTTAACATTGTCGATCG--TGTCTGAACTCTCA 14778 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 |||||||| || || ||||| || ||||| ||||| || || |||||||| Sbjct 14779 ACTTCGAGAGTTATAGTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCAT 14828 Score = 138 bits (152), Expect = 3e-27 Identities = 170/231 (74%), Gaps = 6/231 (3%) Strand=Plus/Plus Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305 |||||| | || || || || || |||| || ||| ||||| |||||||| || || Sbjct 13917 TCCACCCCTTAGCCTGAGAACAAGGTGAAGGGTAGATTCCTTTTGAATATTATAATCTGC 13976 Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365 ||| || | ||| ||||| |||||||| ||||| || ||||| | ||| || ||| Sbjct 13977 GAGAGTCCTTCCATCTTCCAATTGTTTCCCTGCAAAAATCAGTCTCTGCTGGTCTGGTGG 14036 Query 288366 GATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCG---CTCGATTC 288422 ||| || || |||||||| || || || ||||| || || || | |||| ||| || Sbjct 14037 GATACCCTCCTTATCCTGTATCTTGGCCTTCACATTATCAATGGTATCGGAACTC---TC 14093 Query 288423 TACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || | ||||||||||||||| |||| |||||| || || |||||||| Sbjct 14094 CACCTCCAACGTGATCGTCTTCCCCGTCAAAGTCTTCACAAAGATCTGCAT 14144 Score = 95.1 bits (104), Expect = 3e-14 Identities = 153/219 (70%), Gaps = 6/219 (3%) Strand=Plus/Plus Query 288259 CTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCG 288318 || || || || |||| ||| ||| || ||||| ||||| || || || || | ||| Sbjct 14158 CTGAGAACAAGGTGAAGGGTGGATTCCTTCTGGATGTTATAATCAGCCAGAGTTCTTCCA 14217 Query 288319 TCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTA 288378 ||||||||||| || || || || |||| | ||| ||| | |||||| || || || Sbjct 14218 TCTTCTAATTGCTTCCCAGCAAAAATCAACCTCTGCTGATCAGGTGGGATACCCTCCTTG 14277 Query 288379 TCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGATTCTACTTCGAGCGTG 288435 || || ||||| || || || || ||||| | || |||| || || || | |||| Sbjct 14278 TCTTGAATTTTAGCCTTAACATTGTCTATCGTGTCCGAGCTC---TCAACCTCCAACGTG 14334 Query 288436 ATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474 || || || || || | ||||| || || || |||||| Sbjct 14335 ATTGTTTTTCCAGTTAAGGTCTTAACAAAAATTTGCATT 14373 Score = 91.5 bits (100), Expect = 3e-13 Identities = 160/232 (69%), Gaps = 6/232 (3%) Strand=Plus/Plus Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305 |||||| | || || || || ||||| | || || || |||||||| ||||| || Sbjct 13073 TCCACCCCTCAGCCTCAGCACAAGATGGAGAGTAGACTCCTTCTGGATATTGTAGTCCGC 13132 Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365 || || | || || || || |||||||| || ||||| || | ||| || || Sbjct 13133 CAGTGTCCTACCATCCTCCAACTGTTTTCCAGCAAAGATGAGCCTCTGCTGGTCCGGCGG 13192 Query 288366 GATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGATTC 288422 || |||||||||||||| || ||||| ||||| || || || | || |||| || Sbjct 13193 AATACCTTCTTTATCCTGTATCTTCGCCTTCACATTGTCAATCGTGTCTGAGCTC---TC 13249 Query 288423 TACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474 ||||| | ||||| || || || || | ||||| || || || |||||| Sbjct 13250 AACTTCCAATGTGATGGTTTTTCCAGTTAAGGTCTTAACAAAGATTTGCATT 13301 Score = 87.8 bits (96), Expect = 4e-12 Identities = 137/195 (70%), Gaps = 6/195 (3%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || ||||| || |||||||| || || || | || || || || |||||||| || ||| Sbjct 13726 TCCTTTTGAATGTTATAGTCAGCAAGTGTCCTACCATCCTCCAACTGTTTTCCAGCAAAG 13785 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 || || | ||| || || || |||||||||||||| || ||||| ||||| || Sbjct 13786 ATGAGCCTCTGCTGGTCCGGCGGAATACCTTCTTTATCCTGTATCTTCGCCTTCACATTG 13845 Query 288403 TCTATAGAATC---GCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 || || | || |||| || ||||| | ||||| || || || || | ||||| Sbjct 13846 TCAATCGTGTCTGAGCTC---TCAACTTCCAATGTGATGGTTTTTCCAGTTAAGGTCTTA 13902 Query 288460 ACGAATATCTGCATT 288474 || || || |||||| Sbjct 13903 ACAAAGATTTGCATT 13917 >seq67887 Length=198949 Score = 140 bits (154), Expect = 8e-28 Identities = 167/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 |||||||| || | || || | |||| || || || ||||| || || || ||| Sbjct 190727 CCACCGCGAAGACGGAGAACCAAGTGAAGGGTAGACTCCTTCTGGATGTTGTAATCAGCG 190786 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || || |||||||| | ||| ||||| || |||||||| | || || |||| Sbjct 190787 AGGGTTCGGCCGTCTTCAAGTTGCTTTCCGGCAAAGATCAGCCTTTGCTGGTCTGGTGGG 190846 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 ||||| |||||||||||||||||||| || ||||| || |||| ||| ||| ||| Sbjct 190847 ATTCCCTCTTTATCCTGGATTTTCGCCTTAACGTTATCAATAGTGTCGGAGCTTTCAACT 190906 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || ||||| || |||||||| || || |||||||| || ||||| Sbjct 190907 TCAAGGGTGATTGTTTTCCCGGTTAGGGTTTTGACGAAGATTTGCAT 190953 Score = 113 bits (124), Expect = 1e-19 Identities = 142/194 (73%), Gaps = 6/194 (3%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || ||||| || || || |||||||| || || |||||||| || || ||||| || ||| Sbjct 190991 TCCTTTTGAATGTTGTAATCGGCGAGAGTTCGGCCGTCTTCCAACTGCTTTCCGGCAAAG 191050 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 |||| | ||| ||| |||||||||||| || ||||| || ||||| || ||||| Sbjct 191051 ATCAACCTCTGCTGATCTGGTGGGATTCCTTCCTTGTCCTGAATCTTCGCCTTAACGTTG 191110 Query 288403 TCTATAGAATC---GCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 || || | || ||| ||| ||||| || || || || ||||| || || || ||| Sbjct 191111 TCAATTGTGTCAGAGCT---TTCCACTTCAAGGGTAATTGTTTTCCCAGTTAGGGTTTTG 191167 Query 288460 ACGAATATCTGCAT 288473 || || || ||||| Sbjct 191168 ACAAAGATTTGCAT 191181 Score = 107 bits (118), Expect = 5e-18 Identities = 139/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 ||| || ||||| || |||||||| || || | |||||||| | || ||||| ||||| Sbjct 191218 TTCCTTCTGGATGTTGTAGTCGGCTAGGGTTCTGCCGTCTTCGAGCTGCTTTCCGGCGAA 191277 Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401 |||||| | || || ||||||||||||||| ||||| || || || || ||||| Sbjct 191278 GATCAGCCTTTGCTGGTCCGGTGGGATTCCTTCTTTGTCCTGAATCTTAGCCTTAACGTT 191337 Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461 || |||| ||| ||| || || || || || ||||| || || | || || || Sbjct 191338 GTCAATAGTGTCGGAGCTTTCAACCTCAAGGGTTATGGTCTTTCCAGTTAAGGTTTTAAC 191397 Query 288462 GAATATCTGCAT 288473 ||| |||||||| Sbjct 191398 GAAGATCTGCAT 191409 Score = 105 bits (116), Expect = 2e-17 Identities = 162/230 (70%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || | || || | |||| ||| ||| || ||||||||||| || || Sbjct 190499 CCACCACGAAGACGGAGCACCAAGTGAAGTGTGGATTCCTTCTGGATATTATAATCAGCT 190558 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 | || | || ||||| || || || || || ||||||| | ||| || |||| Sbjct 190559 AAAGTTCTCCCATCTTCCAACTGCTTACCAGCAAAGATCAACCTCTGCTGGTCTGGTGGG 190618 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGATTCT 288423 || || || || ||||| || || || || || || || |||| ||| ||| ||| Sbjct 190619 ATACCCTCCTTGTCCTGAATCTTAGCCTTAACATTGTCAATAGTATCTGAGCT---TTCG 190675 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 |||||||| ||||| |||||||| || || || || ||||| |||||||| Sbjct 190676 ACTTCGAGGGTGATAGTCTTCCCAGTGAGTGTTTTAACGAAGATCTGCAT 190725 >seq87509 Length=10540 Score = 132 bits (146), Expect = 1e-25 Identities = 168/230 (73%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || | || |||||||||| || || || ||||| || || ||||| Sbjct 1288 CCACCACGTAGACGGAGCACGAGATGAAGAGTCGACTCCTTCTGGATGTTGTAATCGGCT 1229 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || || ||||| || | || ||||| ||||| ||||||||||| || |||||| Sbjct 1228 AGGGTTCGGCCGTCCTCGAGCTGCTTTCCGGCGAAAATCAGACGCTGCTG---GTCTGGG 1172 Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423 |||||||| || || ||||| || |||||||| || || || | ||| ||||| Sbjct 1171 GGAATTCCTTCCTTGTCTTGGATCTTGGCTTTCACATTGTCGATTGTGTCGGAAGATTCA 1112 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || ||||| || || || || || || |||||||| |||||||| Sbjct 1111 ACCTCAAGTGTGATTGTTTTACCCGTTAGGGTTTTGACGAAGATCTGCAT 1062 >seq2656 Length=23473 Score = 132 bits (146), Expect = 1e-25 Identities = 168/230 (73%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || | ||| || || || | ||| ||| ||||||||||| || || || Sbjct 20498 CCACCACGAAGGCGAAGCACAAGGTGGAGTGTGGATTCCTTTTGGATATTGTAATCTGCA 20439 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| || || || | || || || || || || || | ||| ||| |||| Sbjct 20438 AGGGTGCGCCCATCCTCCAGCTGCTTACCAGCAAATATGAGCCTCTGCTGATCTGGTGGG 20379 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGATTCT 288423 || |||||||||||||| ||||| || |||||||| || |||| || |||| || Sbjct 20378 ATCCCTTCTTTATCCTGAATTTTGGCCTTCACGTTGTCAATAGTGTCAGAGCTC---TCC 20322 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| | ||||| ||||| || |||| ||| ||||| ||||||||||| Sbjct 20321 ACTTCCAAAGTGATGGTCTTTCCTGTCAAAGTTTTGACAAATATCTGCAT 20272 Score = 93.3 bits (102), Expect = 1e-13 Identities = 140/196 (71%), Gaps = 10/196 (5%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || ||||| ||||| || || || || || || || ||||| | || ||||| || ||| Sbjct 19778 TCCTTTTGAATATTGTAATCCGCAAGAGTTCGGCCATCTTCAAGCTGCTTTCCAGCAAAG 19719 Query 288343 ATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399 ||||| | ||| || |||||| || ||||| || || || |||||||| |||||| Sbjct 19718 ATCAGCCTCTGCTGG---TCTGGGGGAATCCCTTCCTTGTCTTGAATTTTCGCCTTCACG 19662 Query 288400 TTTTCTATAGAATCGCTCGATTCT--ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCT 288457 || || || | || | | ||| || || || || || || || ||||| || || | Sbjct 19661 TTATCAATTGTGTC--TGAACTCTCGACCTCAAGAGTAATGGTTTTGCCGGTAAGTGTTT 19604 Query 288458 TGACGAATATCTGCAT 288473 | || ||||||||||| Sbjct 19603 TAACAAATATCTGCAT 19588 Score = 93.3 bits (102), Expect = 1e-13 Identities = 151/215 (70%), Gaps = 12/215 (6%) Strand=Plus/Minus Query 288265 ACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCT 288324 || ||||||| || || || || || ||||| || || || || | ||| ||||| Sbjct 20252 ACCAGATGAAGTGTCGACTCCTTCTGTATGTTATAATCAGCAAGTGTCCTTCCATCTTCA 20193 Query 288325 AATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCC 288381 | ||| || ||||| || |||| ||||| || |||||| || ||||| ||||| Sbjct 20192 AGTTGCTTCCCTGCAAATATCAATCGCTGCTGG---TCTGGGGGAATCCCTTCCTTATCT 20136 Query 288382 TGGATTTTCGCTTTCACGTTTTCTATAGAATCG---CTCGATTCTACTTCGAGCGTGATC 288438 || ||||| || |||||||| || || | || ||| || || || | ||||| Sbjct 20135 TGAATTTTGGCCTTCACGTTATCAATTGTGTCCGAACTC---TCAACCTCCAAGGTGATA 20079 Query 288439 GTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || |||| |||||||||||| || ||||| Sbjct 20078 GTTTTTCCTGTCAAAGTCTTGACGAAGATTTGCAT 20044 >seq91242 Length=50504 Score = 129 bits (142), Expect = 1e-24 Identities = 170/233 (73%), Gaps = 12/233 (5%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| | ||| ||||| |||| ||| |||||| ||||| ||||| || || Sbjct 24199 CCACCACGGAGACGAAGCACGAGGTGAAGGGTGGATTCTTTCTGGATGTTATAATCTGCA 24258 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || || || || || | || || || || || |||| | ||| ||| |||||| Sbjct 24259 AGGGTACGACCATCCTCCAGCTGCTTACCAGCAAAAATCAACCTCTGCTGA---TCTGGG 24315 Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGAT 288420 || || || || ||||| || || |||||||| || || |||| ||| |||| Sbjct 24316 GGAATACCCTCCTTGTCCTGAATCTTTGCTTTCACATTATCAATAGTATCAGAGCTC--- 24372 Query 288421 TCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || | ||||| |||||||| || ||||||||||| ||||||||||| Sbjct 24373 TCCACCTCCAAAGTGATAGTCTTCCCAGTTAGAGTCTTGACAAATATCTGCAT 24425 Score = 114 bits (126), Expect = 3e-20 Identities = 164/230 (71%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || | || || || |||| ||| ||| |||||||| || |||||||| Sbjct 25111 CCACCACGTAGACGGAGGACAAGGTGAAGGGTGGATTCCTTTTGGATGTTGTAGTCGGCA 25170 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| || || |||| || ||||| || ||||||| | ||| ||| ||| Sbjct 25171 AGAGTGCGGCCATCCTCTAGCTGCTTTCCAGCAAAGATCAACCTCTGCTGATCGGGAGGG 25230 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCG---CTCGATTCT 288423 |||||||| || ||||| || || || || || || || |||| ||| ||| || Sbjct 25231 ATTCCTTCCTTGTCCTGAATCTTAGCCTTGACATTATCAATAGTGTCGGAACTC---TCA 25287 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || ||||| || || || || ||||| || ||||| || || || ||||| Sbjct 25288 ACCTCGAGAGTAATGGTTTTTCCGGTAAGCGTCTTTACAAAGATTTGCAT 25337 Score = 107 bits (118), Expect = 5e-18 Identities = 151/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 288262 AGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCT 288321 || || | ||| | |||| ||||| |||||||| || || || || || | || || Sbjct 24442 AGAACCAAATGCAACGTGGACTCTTTCTGGATATTGTAATCAGCAAGGGTCCTCCCATCC 24501 Query 288322 TCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCC 288381 || | || || || || ||||||| ||||| ||| ||| || ||||||||||| Sbjct 24502 TCAAGCTGCTTACCAGCAAAGATCAATCGCTGCTGATCTGGTGGAATCCCTTCTTTATCT 24561 Query 288382 TGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTC 288441 ||||| ||||| || ||||| || || | ||| ||| || || | ||||||||| Sbjct 24562 TGGATCTTCGCCTTTACGTTATCAATTGTATCAGAACTTTCGACCTCCAAGGTGATCGTC 24621 Query 288442 TTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| |||| ||||| || || |||||||| Sbjct 24622 TTCCCTGTCAATGTCTTCACAAAGATCTGCAT 24653 >seq35257 Length=66376 Score = 129 bits (142), Expect = 1e-24 Identities = 168/231 (73%), Gaps = 6/231 (3%) Strand=Plus/Plus Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305 |||||| | || || || || || |||| ||| ||| ||||| |||||||| || || Sbjct 1029 TCCACCCCTTAGCCTGAGAACAAGGTGAAGGGTGGATTCCTTTTGAATATTATAATCTGC 1088 Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365 ||| || | | | ||||| |||||||| ||||| || ||||| | ||| || ||| Sbjct 1089 GAGAGTCCTTTCATCTTCCAATTGTTTCCCTGCAAAAATCAGTCTCTGCTGGTCTGGTGG 1148 Query 288366 GATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCG---CTCGATTC 288422 ||| || || |||||||| || || || ||||| || || || | ||| ||| || Sbjct 1149 GATACCCTCCTTATCCTGTATCTTGGCCTTCACATTGTCAATGGTATCAGAACTC---TC 1205 Query 288423 TACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || | ||||||||||||||| |||| ||||| || || |||||||| Sbjct 1206 CACCTCCAACGTGATCGTCTTCCCCGTCAACGTCTTCACAAAGATCTGCAT 1256 Score = 104 bits (114), Expect = 5e-17 Identities = 168/238 (71%), Gaps = 13/238 (5%) Strand=Plus/Plus Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301 |||| ||||| | | ||| || || || |||| || ||| || ||||| ||||| | Sbjct 1254 CATG-CCACCTCTCAATCTGAGAACAAGGTGAAGGGTAGATTCCTTCTGGATGTTATAAT 1312 Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361 | || ||||| | ||| ||||||||||| || || ||||| ||||| | ||| || | Sbjct 1313 CAGCCAGCGTTCTTCCATCTTCTAATTGCTTCCCAGCGAAAATCAGCCTCTGCTG---GT 1369 Query 288362 CT---GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GC 288415 || ||||| ||||| ||||| ||||||||||| || || || || || | || || Sbjct 1370 CTGGCGGGATACCTTCCTTATCTTGGATTTTCGCCTTAACATTATCAATTGTGTCTGAGC 1429 Query 288416 TCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || ||||| | || || || || || || | || || || || |||||||| Sbjct 1430 TC---TCAACTTCCAATGTAATGGTTTTTCCAGTTAAGGTTTTAACAAAGATCTGCAT 1484 >seq60369 Length=529 Score = 127 bits (140), Expect = 5e-24 Identities = 168/232 (72%), Gaps = 6/232 (3%) Strand=Plus/Minus Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305 |||||| ||||| | ||| || || || | ||| || ||||| ||||| || || || Sbjct 436 TCCACCACGGAGACGAAGAACAAGGTGGAGCGTTGACTCCTTTTGAATATTGTAATCCGC 377 Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365 ||| || ||||| || || | ||||||||||| ||||||| ||| |||||| ||| Sbjct 376 GAGAGTCCGTCCATCCTCGAGCTGTTTTCCTGCAAAGATCAAACGTTGTTGATCTGGTGG 317 Query 288366 GATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGATTC 288422 || ||||| ||||| |||||||| || || || || || || | || ||| ||| Sbjct 316 AATACCTTCCTTATCTTGGATTTTGGCCTTAACATTATCAATCGTGTCCGAGCT---TTC 260 Query 288423 TACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474 ||||| | ||||| |||||||| |||| || || || || || |||||| Sbjct 259 GACTTCCAATGTGATTGTCTTCCCAGTCAAGGTTTTAACAAAAATTTGCATT 208 >seq110773 Length=86849 Score = 120 bits (132), Expect = 7e-22 Identities = 168/233 (72%), Gaps = 12/233 (5%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| | || || | |||| || ||| || ||||| || || |||||| Sbjct 42578 CCACCTCGGAGACGGAGGACCAAGTGAAGGGTAGATTCCTTCTGGATGTTGTAATCGGCG 42637 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || || ||||| || | || || || |||||||| || | || ||| |||||| Sbjct 42638 AGAGTACGGCCGTCCTCAAGCTGCTTGCCGGCGAAGATAAGCCTTTGCTGA---TCTGGG 42694 Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCG---CTCGAT 288420 |||||||| || ||||||||||| ||||| ||||| || || | ||| ||| Sbjct 42695 GGAATTCCTTCCTTGTCCTGGATTTTGGCTTTTACGTTGTCGATTGTGTCGGAACTC--- 42751 Query 288421 TCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || ||||| || || ||||| ||||| || || || ||||| |||||||| Sbjct 42752 TCGACCTCGAGAGTTATGGTCTTTCCGGTAAGGGTTTTCACGAAGATCTGCAT 42804 >seq11802 Length=78489 Score = 120 bits (132), Expect = 7e-22 Identities = 168/233 (72%), Gaps = 12/233 (5%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| | || || || || ||||| | ||| ||| || || ||||| ||||| || Sbjct 56755 CCACCCCTCAGCCTCAGCACCAGATGGAGAGTGGATTCCTTCTGAATATTGTAGTCAGCA 56814 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || || || || || | ||| ||||| |||||||||| | ||| ||| ||||| Sbjct 56815 AGGGTACGACCATCCTCAAGTTGCTTTCCAGCGAAGATCAACCTCTGCTGA---TCTGGA 56871 Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCG---CTCGAT 288420 || |||||||||||||||||||| ||||| || || || || | |||| ||| Sbjct 56872 GGAATGCCTTCTTTATCCTGGATTTTAGCTTTGACATTGTCAATTGTATCGGAACTC--- 56928 Query 288421 TCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || || || || ||||| || |||| ||| || || || |||||||| Sbjct 56929 TCAACCTCAAGTGTAATAGTCTTTCCTGTCAAAGTTTTTACAAAGATCTGCAT 56981 Score = 109 bits (120), Expect = 1e-18 Identities = 163/230 (71%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| | ||| || || |||| || |||||| || || ||||| || || Sbjct 55615 CCACCACGGAGACGAAGAACCAGGTGAAGAGTTGATTCTTTCTGAATGTTATAATCAGCA 55674 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || || || || || | || || || || || ||||| | ||| || ||| Sbjct 55675 AGGGTACGACCATCCTCCAGCTGCTTACCAGCAAAAATCAGCCTCTGCTGGTCTGGTGGA 55734 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGATTCT 288423 || || || || ||||| || || || ||||| || || || | ||| |||| || Sbjct 55735 ATACCCTCCTTGTCCTGAATCTTTGCCTTCACATTGTCAATGGTATCCGAGCTC---TCA 55791 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || |||||||||||||| |||| ||||||||| || |||||||| Sbjct 55792 ACCTCCAGGGTGATCGTCTTCCCAGTCAAAGTCTTGACAAAAATCTGCAT 55841 Score = 98.7 bits (108), Expect = 2e-15 Identities = 165/232 (71%), Gaps = 10/232 (4%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || | ||| || || || | || || ||||||||||| ||||| || Sbjct 57211 CCACCACGCAGACGAAGGACAAGGTGGAGGGTAGACTCCTTTTGGATATTGTAGTCAGCA 57270 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCT--- 288363 || || || || || ||||| || ||||| || ||||||| || || ||| |||| Sbjct 57271 AGAGTTCGGCCATCCTCTAACTGCTTTCCAGCAAAGATCA-AC-CT-TTGCTGATCTGGA 57327 Query 288364 GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423 || |||||||| ||||| ||||| || || || || || || |||| | || | ||| Sbjct 57328 GGAATTCCTTCCTTATCTTGGATCTTTGCCTTAACATTGTCGATAG--TGTCTGAACTCT 57385 Query 288424 --ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || ||||| ||||| || || || || || ||||| || || || ||||| Sbjct 57386 CAACCTCGAGGGTGATGGTTTTGCCAGTGAGGGTCTTTACAAAGATTTGCAT 57437 >seq62100 Length=87079 Score = 113 bits (124), Expect = 1e-19 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| | ||| || ||||| | ||| || || ||||| || ||||| || Sbjct 33731 CCACCACGGAGGCGAAGGACAAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCT 33790 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || || || || || | || || |||||||| |||| ||||| || ||| Sbjct 33791 AGTGTTCGGCCATCCTCAAGCTGCTTACCTGCGAAAATCAACCGCTGCTGGTCCGGTGGA 33850 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || ||||| || ||||| || || || || || || || || | || || ||||| Sbjct 33851 ATGCCTTCCTTGTCCTGAATCTTAGCCTTAACATTGTCAATGGTGTCCGATGACTCTACC 33910 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || | || || |||||||| ||||| ||||| |||||||||||||| Sbjct 33911 TCTAAGGTAATAGTCTTCCCCGTCAGGGTCTTCACGAATATCTGCAT 33957 >seq103126 Length=55294 Score = 100 bits (110), Expect = 7e-16 Identities = 87/108 (81%), Gaps = 0/108 (0%) Strand=Plus/Minus Query 288370 CCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCG 288429 |||||||| || || || || ||||| || || || || | ||||||||||| || ||| Sbjct 27368 CCTTCTTTGTCTTGAATCTTAGCTTTGACATTGTCAATGGTGTCGCTCGATTCAACCTCG 27309 Query 288430 AGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATTATG 288477 |||||||| ||||||||||| || || || ||||| ||||||||| || Sbjct 27308 AGCGTGATTGTCTTCCCGGTTAGGGTTTTCACGAAGATCTGCATTTTG 27261 >seq51332 Length=333 Score = 95.1 bits (104), Expect = 3e-14 Identities = 124/169 (73%), Gaps = 7/169 (4%) Strand=Plus/Minus Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301 |||| ||||| | | ||| || || || |||| || ||| || ||||| ||||| | Sbjct 201 CATG-CCACCTCTCAATCTGAGAACAAGGTGAAGGGTAGATTCCTTCTGGATGTTATAAT 143 Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361 | || ||||| | ||| ||||||||||| || || ||||| ||||| | ||| || | Sbjct 142 CAGCCAGCGTTCTTCCATCTTCTAATTGCTTCCCAGCGAAAATCAGCCTCTGCTGG---T 86 Query 288362 CTGG---GATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTAT 288407 |||| ||| ||||| ||||| ||||||||||| || || || || || Sbjct 85 CTGGCGGGATACCTTCCTTATCTTGGATTTTCGCCTTAACATTATCAAT 37 >seq82140 Length=200795 Score = 91.5 bits (100), Expect = 3e-13 Identities = 83/105 (79%), Gaps = 0/105 (0%) Strand=Plus/Plus Query 288370 CCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCG 288429 ||||| || || || ||||| ||||| || || || |||| ||| || ||||| |||||| Sbjct 173108 CCTTCCTTGTCTTGTATTTTGGCTTTAACATTGTCGATAGTATCACTGGATTCAACTTCG 173167 Query 288430 AGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474 || || || || || || || ||||| || ||||||||||||||| Sbjct 173168 AGAGTTATGGTTTTACCAGTGAGAGTTTTCACGAATATCTGCATT 173212 >seq75959 Length=145061 Score = 86.0 bits (94), Expect = 1e-11 Identities = 146/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 269113 GAAAAAGAGTTCATTTGTGACGCTATCCCATGTTCTATGATCGGTATGAATGCCGATCTC 269172 |||| ||||| | |||||||| | || ||| | || | || ||||||| ||| | Sbjct 63260 GAAAGGGAGTTTGTGTGTGACGCGCTGCCTTGTGCGCTGGTGGGAATGAATGGAGATTTG 63201 Query 269173 ATGAATCAATATATCGAATTCGTGGCTGATCGTATCTTCACGGCACTCGGTTATGAGAAA 269232 |||| |||| || ||||||||||||||| | | || || | |||||||| || Sbjct 63200 ATGAGCAAATACATTGAATTCGTGGCTGATAGATTGTTGGATGCTTTGGGTTATGATAAG 63141 Query 269233 GTGTACAATTCGAAGAATCCCTTCGCCTTTATGGAACTAATTTCGCTCGAAGGAAAGACG 269292 |||||||| | ||||||| || | | ||||| || ||| | |||| ||||| Sbjct 63140 TTGTACAATGCTCAGAATCCGTTTGATTGGATGGAGCTGATTAGTTTACAAGGGAAGACT 63081 Query 269293 AACTTCTTCGAAAAGCGTGTCAGCGACTATCA 269324 || ||||| || ||| | || | || ||||| Sbjct 63080 AATTTCTTTGAGAAGAGAGTTGGGGAGTATCA 63049 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1177242940153544