Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nicotiana_20tomentosiformis_20[refseq_20GCF_5F000390325.2_202013-05- 16] 159,548 sequences; 1,688,466,321 total letters Query= NC_019401.1 Length=358663 Score E Sequences producing significant alignments: (Bits) Value seq120438 96.9 8e-15 >seq120438 Length=91388 Score = 96.9 bits (106), Expect = 8e-15 Identities = 311/473 (66%), Gaps = 16/473 (3%) Strand=Plus/Plus Query 150307 AGAAGGTAAACTTGATCCACTAATTGGTCGCGAAACTGAACTT-GATGATCTAATTCAGA 150365 || ||| ||||||||||| | || ||| | || ||| || || || |||||| || Sbjct 52371 AGCAGGAAAACTTGATCCTGTGATCGGTAGGGATGAAGAAATTCGAAGAG-TAATTCGGA 52429 Query 150366 TTCTTTCTCGTAAAACCAAAAAGAAT--GGTGCGTTAGTTGGTGAACCAGGTGTTGGTAA 150423 || | || | | || || || ||| ||||| ||| ||||||| || ||||||||||| Sbjct 52430 TTTTGTCGAGGAGGACGAAGAATAATCCGGTGC-TTA-TTGGTGAGCCTGGTGTTGGTAA 52487 Query 150424 AACACAAATCGTTGACGGATTAGCACAACGCATCGCTAATGGTGATGTTCCAGATTCTAT 150483 |||| | | ||||| || |||||||| | || | | || ||||| || | | | Sbjct 52488 AACAGCAGTAGTTGAAGGGCTAGCACAAAGGATTGTTCGAGGCGATGTCCCGAGTAATTT 52547 Query 150484 GAAAGATGTTGAAATTCTTTCTTTGAATATGGGTGCATTTACTGCTGGTACTAAGTATCG 150543 | |||||| | || | | ||| ||||||| ||||| | |||||| | || ||| | Sbjct 52548 GGCTGATGTTAGACTTATAGCATTGGATATGGGGGCATTAATTGCTGGAGCAAAATATAG 52607 Query 150544 TGGTGAATTCGAAGAACG--TGTAGACAATTTGCTACAAGAACTAAAAGAACGCGATG-- 150599 |||||||| ||||| | || || || || || | ||| | ||||| || | Sbjct 52608 AGGTGAATTTGAAGAGAGGTTGAAGGCA--GTGTTAAAGGAAGTGGAAGAAGCAGAAGGG 52665 Query 150600 -ATGTTATTCTGTTCATCGATGAAATCCATACTATTATGGGTGCTGGTGCGACTGGCGGC 150658 | || || || || || ||||| || || || | ||||||||| |||| | Sbjct 52666 AAAGTGATCCTTTTTATTGATGAGATTCACTTGGTTTTAGGTGCTGGTAGGACT---GAA 52722 Query 150659 GGTTCTTTGGATATGAGCAATATGTTAAAACCTGCTCTATCTCGCGGTGAAATTCGTGTC 150718 || ||| ||||| |||| |||| || || || || | || || | | | Sbjct 52723 GGGTCTATGGATGCTGCCAATTTGTTTAAGCCAATGCTTGCTAGGGGCCAATTAAGGTGC 52782 Query 150719 ATCGGTGCAACAACCTACGATGAATATCGTAAACACATTGAAAAAGATGCAGC 150771 || ||||||||||| ||| || ||| | || | | ||||| ||||| || Sbjct 52783 ATTGGTGCAACAACTCTCGAGGAGTATAGGAAGTATGTCGAAAAGGATGCTGC 52835 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1145244485662904