Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nicotiana_20tomentosiformis_20[refseq_20GCF_5F000390325.2_202013-05- 16] 159,548 sequences; 1,688,466,321 total letters Query= NC_021249.1 Length=282895 Score E Sequences producing significant alignments: (Bits) Value seq73737 129 1e-24 seq11802 127 4e-24 seq67887 125 1e-23 seq35257 116 7e-21 seq102184 113 8e-20 seq68600 107 3e-18 seq2656 104 4e-17 seq75959 100 5e-16 seq82140 95.1 2e-14 seq91242 87.8 3e-12 seq60369 84.2 4e-11 >seq73737 Length=23676 Score = 129 bits (142), Expect = 1e-24 Identities = 167/231 (72%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 || ||||| | ||| || | |||| || | || | ||| || ||||||||||||| Sbjct 14371 ATTCCACCACGAAGGCGGAGGACTAGGTGAAGTGTTGACTCCTTTTGAATATTATAATCT 14430 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 | | || || | || |||||||| || || |||||||| || || |||||||| ||| Sbjct 14431 GCCAGAGTGCGCCCATCTTCCAATTGCTTCCCCGCAAAAATCAACCTTTGTTGGTCCGGT 14490 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || || ||||| |||||||| ||||| || |||||| ||||| || || || Sbjct 14491 GGAATACCTTCCTTATCTTGAATTTTCGCCTTAACATTATCAATAGTGTCCGAGCTCTCA 14550 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATT 172070 ||||| | || || ||||| || ||||| ||||||| ||| || |||||| Sbjct 14551 ACTTCCAATGTGATTGTTTTCCCGGTTAAGGTTTTAACGAAGATTTGCATT 14601 Score = 102 bits (112), Expect = 1e-16 Identities = 116/156 (74%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 171915 TCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTA 171974 || ||||| ||||| |||||||| || | ||||| ||||| || || || ||||||||| Sbjct 13534 TCCTCCAACTGTTTTCCAGCAAAGATGAGCCTCTGCTGGTCCGGCGGAATACCTTCTTTA 13593 Query 171975 TCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATG 172034 || ||||| || || ||||| || || ||||| || ||||| | || ||| Sbjct 13594 TCCTGTATCTTCGCCTTCACATTGTCAATCGTGTCTGAGCTCTCAACTTCCAATGTGATG 13653 Query 172035 GTTTTACCAGTTAATGTTTTAATGAATATCTGCATT 172070 ||||| |||||||| ||||||| || || |||||| Sbjct 13654 GTTTTTCCAGTTAAGGTTTTAACAAAGATTTGCATT 13689 Score = 100 bits (110), Expect = 5e-16 Identities = 132/183 (72%), Gaps = 0/183 (0%) Strand=Plus/Plus Query 171888 ATATTATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTC 171947 || |||||||| | | || || | | || || ||||| || ||||||||||| || ||| Sbjct 14191 ATGTTATAATCAGCCAGAGTTCTTCCATCTTCTAATTGCTTCCCAGCAAAAATCAACCTC 14250 Query 171948 TGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTA 172007 || || |||||||| || || || || ||||| |||||| || ||||| ||| || Sbjct 14251 TGCTGATCAGGTGGGATACCCTCCTTGTCTTGAATTTTAGCCTTAACATTGTCTATCGTG 14310 Query 172008 TCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGC 172067 || || || || || | || || ||||| |||||||| || |||| || || ||| Sbjct 14311 TCCGAGCTCTCAACCTCCAACGTGATTGTTTTTCCAGTTAAGGTCTTAACAAAAATTTGC 14370 Query 172068 ATT 172070 ||| Sbjct 14371 ATT 14373 Score = 96.9 bits (106), Expect = 6e-15 Identities = 115/156 (74%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 171915 TCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTA 171974 || ||||| ||||| |||||||| || | ||||| ||||| || || || ||||||||| Sbjct 13146 TCCTCCAACTGTTTTCCAGCAAAGATGAGCCTCTGCTGGTCCGGCGGAATACCTTCTTTA 13205 Query 171975 TCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATG 172034 || ||||| || || ||||| || || ||||| || ||||| | || ||| Sbjct 13206 TCCTGTATCTTCGCCTTCACATTGTCAATCGTGTCTGAGCTCTCAACTTCCAATGTGATG 13265 Query 172035 GTTTTACCAGTTAATGTTTTAATGAATATCTGCATT 172070 ||||| |||||||| || |||| || || |||||| Sbjct 13266 GTTTTTCCAGTTAAGGTCTTAACAAAGATTTGCATT 13301 Score = 96.9 bits (106), Expect = 6e-15 Identities = 115/156 (74%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 171915 TCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTA 171974 || ||||| ||||| |||||||| || | ||||| ||||| || || || ||||||||| Sbjct 13762 TCCTCCAACTGTTTTCCAGCAAAGATGAGCCTCTGCTGGTCCGGCGGAATACCTTCTTTA 13821 Query 171975 TCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATG 172034 || ||||| || || ||||| || || ||||| || ||||| | || ||| Sbjct 13822 TCCTGTATCTTCGCCTTCACATTGTCAATCGTGTCTGAGCTCTCAACTTCCAATGTGATG 13881 Query 172035 GTTTTACCAGTTAATGTTTTAATGAATATCTGCATT 172070 ||||| |||||||| || |||| || || |||||| Sbjct 13882 GTTTTTCCAGTTAAGGTCTTAACAAAGATTTGCATT 13917 Score = 96.9 bits (106), Expect = 6e-15 Identities = 131/183 (72%), Gaps = 0/183 (0%) Strand=Plus/Plus Query 171887 AATATTATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCT 171946 |||||||||||||| | || | | | || ||||||||||| || |||||||| | ||| Sbjct 13962 AATATTATAATCTGCGAGAGTCCTTCCATCTTCCAATTGTTTCCCTGCAAAAATCAGTCT 14021 Query 171947 CTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGT 172006 ||| ||||| ||||| || || || ||||| ||||| || || |||||| || || Sbjct 14022 CTGCTGGTCTGGTGGGATACCCTCCTTATCCTGTATCTTGGCCTTCACATTATCAATGGT 14081 Query 172007 ATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTG 172066 ||| || || || || | || || || || || || || || || | || ||||| Sbjct 14082 ATCGGAACTCTCCACCTCCAACGTGATCGTCTTCCCCGTCAAAGTCTTCACAAAGATCTG 14141 Query 172067 CAT 172069 ||| Sbjct 14142 CAT 14144 >seq11802 Length=78489 Score = 127 bits (140), Expect = 4e-24 Identities = 166/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 |||||||| || || || | || ||||| | || | || || || |||||||| Sbjct 56296 ATACCACCCCTCAGGCGCAGCACCAAATGGAGGGTTGATTCCTTCTGGATGTTATAATCA 56355 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 | ||||| | | | || || | ||||||||||||||||| || ||||| ||||||||| Sbjct 56356 GCTAAAGTCCTTCCATCCTCAAGCTGTTTACCAGCAAAAATCAACCTCTGCTGGTCAGGT 56415 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || || ||||| |||||||| |||||| || ||||| || || || || || Sbjct 56416 GGGATCCCTTCCTTATCTTGAATTTTAGCCTTGACATTGTCGATGGTGTCCGAGCTCTCA 56475 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 || || || ||||||||||| || |||||||| || | || || ||||| Sbjct 56476 ACCTCAAGGGTAATGGTTTTCCCTGTTAATGTCTTCACAAAGATTTGCAT 56525 Score = 118 bits (130), Expect = 2e-21 Identities = 164/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 |||||||| || || || | || ||||| | || | || || || |||||||| Sbjct 56068 ATACCACCCCTCAGGCGCAGCACCAAATGGAGGGTTGATTCCTTCTGGATGTTATAATCA 56127 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 | ||||| | | | || || | ||||||||||||||||| || ||||| ||||||||| Sbjct 56128 GCTAAAGTCCTTCCATCCTCAAGCTGTTTACCAGCAAAAATCAACCTCTGCTGGTCAGGT 56187 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || || ||||| |||||||| |||||| || ||||| || || || || || Sbjct 56188 GGGATCCCTTCCTTATCTTGAATTTTAGCCTTGACATTGTCGATGGTGTCCGAGCTCTCA 56247 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 || || || || || ||||| || || ||||| || | || |||||||| Sbjct 56248 ACCTCAAGGGTGATAGTTTTCCCTGTCAATGTCTTCACAAAGATCTGCAT 56297 Score = 104 bits (114), Expect = 4e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 || || ||||| | ||| | || ||||| | || | |||||| || |||||||| Sbjct 55840 ATCCCTCCTCTCAATCGGAGCACCAAATGGAGTGTGGACTCTTTCTGGATGTTATAATCA 55899 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 | | || | | || || | ||| || ||||||||||| || ||||| ||||||||| Sbjct 55900 GCAAGAGTCCTCCCATCCTCAAGTTGCTTCCCAGCAAAAATCAACCTCTGCTGGTCAGGT 55959 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || || ||||| |||||||| |||||| || ||||| || || || || || Sbjct 55960 GGGATCCCTTCCTTATCTTGAATTTTAGCCTTGACATTGTCGATGGTGTCGGAACTCTCA 56019 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 || || || || || ||||| || || ||||| || | || |||||||| Sbjct 56020 ACCTCAAGGGTGATAGTTTTCCCTGTCAATGTCTTCACAAAGATCTGCAT 56069 Score = 98.7 bits (108), Expect = 2e-15 Identities = 131/182 (72%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 171888 ATATTATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTC 171947 ||||| ||||| | || | | | | || || | || || ||||||||||| | ||| Sbjct 56572 ATATTGTAATCAGCTAGTGTCCTTCCATCTTCAAGCTGCTTCCCAGCAAAAATAAGCCTC 56631 Query 171948 TGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTA 172007 || ||||||||||| || ||||| |||||||| || || |||||||| || || Sbjct 56632 TGCTGGTCAGGTGGAATCCCTTCCTTATCTTGAATCTTTGCCTTTACATTGTCGATGGTG 56691 Query 172008 TCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGC 172067 || || || ||||| |||||||| ||||| ||||| || ||||| | || || ||| Sbjct 56692 TCCGAGCTCTCGACTTCAAGAGTAATAGTTTTCCCAGTCAAGGTTTTCACAAAGATTTGC 56751 Query 172068 AT 172069 || Sbjct 56752 AT 56753 >seq67887 Length=198949 Score = 125 bits (138), Expect = 1e-23 Identities = 137/182 (75%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 171888 ATATTATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTC 171947 ||||||||||| | ||||| || | || ||||| || ||||||||||| || || ||| Sbjct 190544 ATATTATAATCAGCTAAAGTTCTCCCATCTTCCAACTGCTTACCAGCAAAGATCAACCTC 190603 Query 171948 TGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTA 172007 || ||||| ||||| || || || || || || || ||| || ||||| |||||| Sbjct 190604 TGCTGGTCTGGTGGGATACCCTCCTTGTCCTGAATCTTAGCCTTAACATTGTCAATAGTA 190663 Query 172008 TCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGC 172067 ||||| ||| ||||| || || || || || ||||| | |||||||| ||| |||||| Sbjct 190664 TCTGAGCTTTCGACTTCGAGGGTGATAGTCTTCCCAGTGAGTGTTTTAACGAAGATCTGC 190723 Query 172068 AT 172069 || Sbjct 190724 AT 190725 Score = 86.0 bits (94), Expect = 1e-11 Identities = 113/157 (72%), Gaps = 0/157 (0%) Strand=Plus/Plus Query 171913 CGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTT 171972 |||| || | || || || || || || | || || ||||| ||||| |||||||||| Sbjct 191253 CGTCTTCGAGCTGCTTTCCGGCGAAGATCAGCCTTTGCTGGTCCGGTGGGATTCCTTCTT 191312 Query 171973 TATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAA 172032 | || || || ||| || || || ||||| || || ||| || || || || | Sbjct 191313 TGTCCTGAATCTTAGCCTTAACGTTGTCAATAGTGTCGGAGCTTTCAACCTCAAGGGTTA 191372 Query 172033 TGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 |||| || |||||||| ||||||| ||| |||||||| Sbjct 191373 TGGTCTTTCCAGTTAAGGTTTTAACGAAGATCTGCAT 191409 >seq35257 Length=66376 Score = 116 bits (128), Expect = 7e-21 Identities = 145/196 (74%), Gaps = 2/196 (1%) Strand=Plus/Plus Query 171888 ATATTATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTC 171947 || |||||||| | | | || | | || || ||||| || ||||| ||||| | ||| Sbjct 1303 ATGTTATAATCAGCCAGCGTTCTTCCATCTTCTAATTGCTTCCCAGCGAAAATCAGCCTC 1362 Query 171948 TGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTA 172007 || ||||| || || || ||||| |||||||| ||||| || |||||| || || Sbjct 1363 TGCTGGTCTGGCGGGATACCTTCCTTATCTTGGATTTTCGCCTTAACATTATCAATTGTG 1422 Query 172008 TCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGC 172067 ||||| || ||||| | ||||||||||| |||||||| ||||||| || |||||| Sbjct 1423 TCTGAGCTCTCAACTTCCAATGTAATGGTTTTTCCAGTTAAGGTTTTAACAAAGATCTGC 1482 Query 172068 AT-TTTATT-ATAAAA 172081 || | |||| |||||| Sbjct 1483 ATCTGTATTAATAAAA 1498 Score = 96.9 bits (106), Expect = 6e-15 Identities = 131/183 (72%), Gaps = 0/183 (0%) Strand=Plus/Plus Query 171887 AATATTATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCT 171946 |||||||||||||| | || | ||| || ||||||||||| || |||||||| | ||| Sbjct 1074 AATATTATAATCTGCGAGAGTCCTTTCATCTTCCAATTGTTTCCCTGCAAAAATCAGTCT 1133 Query 171947 CTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGT 172006 ||| ||||| ||||| || || || ||||| ||||| || || ||||| || || Sbjct 1134 CTGCTGGTCTGGTGGGATACCCTCCTTATCCTGTATCTTGGCCTTCACATTGTCAATGGT 1193 Query 172007 ATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTG 172066 ||| || || || || | || || || || || || || || || | || ||||| Sbjct 1194 ATCAGAACTCTCCACCTCCAACGTGATCGTCTTCCCCGTCAACGTCTTCACAAAGATCTG 1253 Query 172067 CAT 172069 ||| Sbjct 1254 CAT 1256 >seq102184 Length=23720 Score = 113 bits (124), Expect = 8e-20 Identities = 163/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 || ||||||||||| || | || | ||| | || | |||||| ||| || |||||| Sbjct 1913 ATGCCACCTCTAAGACGAAGAACAAGATGCAGGGTTGACTCTTTCTGAATGTTGTAATCT 1972 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 | || | | |||| || | ||| || || ||||| || | |||||| ||||| || Sbjct 1973 GCCAATGTCCTCCCGTCCTCAAGTTGCTTCCCGGCAAAGATCAGTCTCTGCTGGTCCGGA 2032 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || || ||||| || ||||| || || ||||||||| ||||||||||| ||| Sbjct 2033 GGAATACCTTCCTTGTCTTGAATCTTTGCTTTTACATTGTCGATAGTATCTGAACTTTCA 2092 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 ||||| || || ||||| || || || | ||| || | || |||||||| Sbjct 2093 ACTTCAAGGGTGATGGTCTTGCCGGTAAGTGTCTTGACAAAGATCTGCAT 2142 Score = 91.5 bits (100), Expect = 3e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 |||||||| | || || | || | ||| | |||| ||| || || || || || Sbjct 2369 ATACCACCACGGAGACGGAGGACAAGATGGAGGGTAGACTCCTTTTGGATGTTGTAGTCA 2428 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 | | || |||| | || || | ||||| |||||||| || | ||||| || ||||| Sbjct 2429 GCAAGAGTTCGTCCATCTTCAAGCTGTTTTCCAGCAAAGATCAGCCTCTGCTGATCAGGA 2488 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || || ||||| || ||||| || ||| ||| ||||| || || || || || Sbjct 2489 GGAATGCCTTCCTTGTCTTGAATCTTAGCTTTGACATTGTCAATGGTGTCAGAACTCTCG 2548 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 || || ||||||||||| || || || | ||| |||| || |||||||| Sbjct 2549 ACCTCAAGAGTAATGGTCTTTCCGGTGAGTGTCTTAACAAAGATCTGCAT 2598 Score = 84.2 bits (92), Expect = 4e-11 Identities = 141/204 (69%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 171866 ATGTAAAGTAGCCTCTTTAGAAATATTATAATCTGATAAAGATCGTTCGTCATCCAATTG 171925 ||| | ||||| |||||| ||||| || |||| | | || | || || | || Sbjct 1483 ATGAAGAGTAGACTCTTTCTGGATATTGTAGTCTGCAAGCGTGCGACCATCCTCAAGCTG 1542 Query 171926 TTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTT 171985 ||||||||||| || | ||||| || || ||||| || ||||| ||||| ||||| || Sbjct 1543 CTTACCAGCAAAGATAAGCCTCTGCTGATCTGGTGGAATGCCTTCCTTATCCTGTATCTT 1602 Query 171986 ATTTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGT 172045 || ||||| || |||||||| || ||||| | || || || || ||||| Sbjct 1603 TGCCTTCACATTGTCAATGGTATCTGAGCTCTCCACTTCCAAGGTGATTGTCTTCCCAGT 1662 Query 172046 TAATGTTTTAATGAATATCTGCAT 172069 ||||| || | || |||||||| Sbjct 1663 CAATGTCTTCACAAAGATCTGCAT 1686 >seq68600 Length=37585 Score = 107 bits (118), Expect = 3e-18 Identities = 161/228 (71%), Gaps = 3/228 (1%) Strand=Plus/Plus Query 171842 ACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCTGA 171901 ||| || | ||| || || || | ||| | ||| | || || |||||| ||||| | Sbjct 35080 ACCTCCGCGAAGACGCAACACAAGATGGAGAGTGGAGTCCTTCTGAATATTGTAATCAGC 35139 Query 171902 TAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGG 171961 | ||| | || || | |||||| |||||||||||||| || ||||| || || || Sbjct 35140 AAGTATTCGACCATCTTCAAGTTGTTTTCCAGCAAAAATTAACCTTTGTTGATCTGGAGG 35199 Query 171962 TATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTAC 172021 |||||||| || ||||| ||||| |||| ||||| ||||| || || | || Sbjct 35200 AATTCCTTCCTTGTCTTGAATTTTTGTTTTAACATTGTCAATAGTGTC---GGAGTTAAC 35256 Query 172022 TTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 || || |||||||| || ||||||| ||| |||| || || ||||| Sbjct 35257 CTCGAGTGTAATGGTCTTTCCAGTTAGTGTCTTAACAAAGATTTGCAT 35304 >seq2656 Length=23473 Score = 104 bits (114), Expect = 4e-17 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 171873 GTAGCCTCTTTAGAAATATTATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCA 171932 |||| ||| || |||||| ||||| | | || ||| | || || | || || ||| Sbjct 19784 GTAGACTCCTTTTGAATATTGTAATCCGCAAGAGTTCGGCCATCTTCAAGCTGCTTTCCA 19725 Query 171933 GCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTT 171992 ||||| || | ||||| ||||| || || || ||||| || ||||| ||||| || Sbjct 19724 GCAAAGATCAGCCTCTGCTGGTCTGGGGGAATCCCTTCCTTGTCTTGAATTTTCGCCTTC 19665 Query 171993 ACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTT 172052 || ||| || || ||||| || || || |||||||||||||| || || | |||| Sbjct 19664 ACGTTATCAATTGTGTCTGAACTCTCGACCTCAAGAGTAATGGTTTTGCCGGTAAGTGTT 19605 Query 172053 TTAATGAATATCTGCAT 172069 |||| ||||||||||| Sbjct 19604 TTAACAAATATCTGCAT 19588 Score = 91.5 bits (100), Expect = 3e-13 Identities = 130/183 (71%), Gaps = 0/183 (0%) Strand=Plus/Minus Query 171887 AATATTATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCT 171946 |||||| ||||| | | || ||| | || || | || || |||||||| || | || Sbjct 19542 AATATTGTAATCAGCAAGAGTTCGGCCATCTTCAAGCTGCTTTCCAGCAAAGATCAGCCT 19483 Query 171947 CTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGT 172006 ||| ||||| || || || ||||| || ||||| ||||| || || ||| || || Sbjct 19482 CTGCTGGTCTGGGGGAATCCCTTCCTTGTCTTGAATTTTGGCCTTCACGTTATCAATTGT 19423 Query 172007 ATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTG 172066 ||||| || || || |||||||||||||| ||||| | ||| || | || ||||| Sbjct 19422 GTCTGAACTCTCAACCTCGAGAGTAATGGTTTTTCCAGTGAGTGTCTTTACAAAGATCTG 19363 Query 172067 CAT 172069 ||| Sbjct 19362 CAT 19360 Score = 89.7 bits (98), Expect = 9e-13 Identities = 129/182 (71%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 171888 ATATTATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTC 171947 ||||| ||||||| | | || | || |||| || ||||||||||| || | ||| Sbjct 20453 ATATTGTAATCTGCAAGGGTGCGCCCATCCTCCAGCTGCTTACCAGCAAATATGAGCCTC 20394 Query 171948 TGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTA 172007 || || || ||||| || ||||||||||| || ||||| || || || ||||| Sbjct 20393 TGCTGATCTGGTGGGATCCCTTCTTTATCCTGAATTTTGGCCTTCACGTTGTCAATAGTG 20334 Query 172008 TCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGC 172067 || || || ||||| | ||| ||||| || || || || ||||| | ||||||||| Sbjct 20333 TCAGAGCTCTCCACTTCCAAAGTGATGGTCTTTCCTGTCAAAGTTTTGACAAATATCTGC 20274 Query 172068 AT 172069 || Sbjct 20273 AT 20272 >seq75959 Length=145061 Score = 100 bits (110), Expect = 5e-16 Identities = 114/153 (75%), Gaps = 0/153 (0%) Strand=Plus/Plus Query 39116 ATATAGTAAACATGCAAAATCCGTATGTAAACCTTCGTCCCTAGATATAAATTCATTACT 39175 ||| || ||||| |||||||| || |||||||||||||| || || || || || Sbjct 63327 ATAAAGCAAACAAGCAAAATCACAGTGCAAACCTTCGTCCCTTGAAATCAACTCGTTCGA 63386 Query 39176 AAAAGTTAATCCTGGCATTAATCCTCTCTTTTTAAGCCAAAATATTGATGCAAAACTACT 39235 || |||||||| |||||||| || | |||||| | ||| ||||| | || || | Sbjct 63387 GAAGGTTAATCCAGGCATTAACCCCCGCTTTTTTAACCAGAATATAGCACAGAAGCTTCC 63446 Query 39236 AGAAAAGAATATACCCTCCACACACGCAAATGC 39268 ||| || || ||||| |||||||| |||||||| Sbjct 63447 AGAGAAAAAAATACCTTCCACACAAGCAAATGC 63479 >seq82140 Length=200795 Score = 95.1 bits (104), Expect = 2e-14 Identities = 85/107 (79%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 171966 CCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACTTCT 172025 ||||| || ||||||||||| ||| ||||| |||||||| ||||| ||||| Sbjct 173108 CCTTCCTTGTCTTGTATTTTGGCTTTAACATTGTCGATAGTATCACTGGATTCAACTTCG 173167 Query 172026 AGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATTTT 172072 ||||| |||||||||||||| | ||||| | ||||||||||||||| Sbjct 173168 AGAGTTATGGTTTTACCAGTGAGAGTTTTCACGAATATCTGCATTTT 173214 >seq91242 Length=50504 Score = 87.8 bits (96), Expect = 3e-12 Identities = 147/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 171861 ACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCTGATAAAGATCGTTCG-TCATC 171919 || ||||| || || | |||||| ||||| ||||| | || | || | | || || Sbjct 24445 ACCAAATGCAACGTGGACTCTTTCTGGATATTGTAATCAGC-AAGGGTCCTCCCATCCTC 24503 Query 171920 CAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTATCTTG 171979 | || ||||||||||| || |||| ||| || || ||||| || |||||||||||||| Sbjct 24504 AAGCTGCTTACCAGCAAAGATCAATCGCTGCTGATCTGGTGGAATCCCTTCTTTATCTTG 24563 Query 171980 TATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATGGTTTT 172039 || || ||||| ||| || ||||| || ||| || || | || || || || Sbjct 24564 GATCTTCGCCTTTACGTTATCAATTGTATCAGAACTTTCGACCTCCAAGGTGATCGTCTT 24623 Query 172040 ACCAGTTAATGTTTTAATGAATATCTGCAT 172069 || || ||||| || | || |||||||| Sbjct 24624 CCCTGTCAATGTCTTCACAAAGATCTGCAT 24653 Score = 86.0 bits (94), Expect = 1e-11 Identities = 128/182 (70%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 171888 ATATTATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTC 171947 || |||||||||| | | || | || |||| || |||||||||||||| || ||| Sbjct 24244 ATGTTATAATCTGCAAGGGTACGACCATCCTCCAGCTGCTTACCAGCAAAAATCAACCTC 24303 Query 171948 TGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTA 172007 || || || || || || || || || || || || || ||| |||||| |||||| Sbjct 24304 TGCTGATCTGGGGGAATACCCTCCTTGTCCTGAATCTTTGCTTTCACATTATCAATAGTA 24363 Query 172008 TCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGC 172067 || || || || || | ||| || || || ||||||| || || | ||||||||| Sbjct 24364 TCAGAGCTCTCCACCTCCAAAGTGATAGTCTTCCCAGTTAGAGTCTTGACAAATATCTGC 24423 Query 172068 AT 172069 || Sbjct 24424 AT 24425 >seq60369 Length=529 Score = 84.2 bits (92), Expect = 4e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 || ||||| || || | | |||| || | ||| | ||| || ||||||||||||| Sbjct 210 ATTCCACCCCTTAGCCTGAGAACTAGGTGGAGAGTTGACTCCTTTTGAATATTATAATCT 151 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 | | || || | || |||||||| || || ||||| || | ||||| || || ||| Sbjct 150 GCGAGAGTACGCCCATCTTCCAATTGCTTCCCTGCAAATATCAGCCTCTGCTGATCCGGT 91 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || || || ||||| ||||||||||| || ||||| || || || || || Sbjct 90 GGGATACCCTCTTTGTCTTGTATTTTCGCCTTAACATTGTCAATCGTGTCCGAGCTCTCA 31 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAA 172048 ||||| | || || ||||| || ||||| Sbjct 30 ACTTCCAATGTGATTGTTTTCCCGGTTAA 2 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 903330842018400