Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nicotiana_20tomentosiformis_20[refseq_20GCF_5F000390325.2_202013-05- 16] 159,548 sequences; 1,688,466,321 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq75959 116 6e-20 >seq75959 Length=145061 Score = 116 bits (128), Expect = 6e-20 Identities = 176/249 (71%), Gaps = 1/249 (0%) Strand=Plus/Plus Query 796150 GCCTCGGGTACTTGGACCTCCTTCATGAAGCGGCCGGCCAGGTTCTCAGCCACGATGCCG 796209 ||||| | |||||||| || |||||||| | ||||| ||||| || ||||||||| Sbjct 63682 GCCTCCGCAACTTGGACTTCTTTCATGAACCTTCCGGCTAGGTTTTCTAAAACGATGCCG 63741 Query 796210 TCGCTGGCGGCGAAAAAGGCGAGGACGTGCTTGATAAAGTGACGCTCGTCGTCGCTGAGC 796269 || ||||||||||||||| ||||| || |||| || || | ||| || | | || Sbjct 63742 TCTGAGGCGGCGAAAAAGGCAAGGACATGAGTGATGAAATGCCTTTCGCCGGGGGTTAGG 63801 Query 796270 GAGACCCAGTGGACCGTGTCGGCGCCGAGGTCGACCTCCTCGGCGGTCCAAAAGGAGGCC 796329 | ||||||| || || | | ||||| ||||| || ||||| || ||||| Sbjct 63802 GTTTCCCAGTGACGGGTATCTGAAGATAAATCGACTTCCTCAGCAGTCCAGAAAGAGGCT 63861 Query 796330 TCGGCCTTTTTGTACATCTCCCATATCCGTTGGTAGCGGATGGGGAACAGAACAAAGCGA 796389 ||| ||||||||||| ||||| || || |||| | || ||||||| | || ||| Sbjct 63862 AAGGCTTTTTTGTACATTTCCCAAATTTGTGGGTATTGAATTGGGAACATACAGAACCGA 63921 Query 796390 T-TGGGGTT 796397 | |||| || Sbjct 63922 TCTGGGCTT 63930 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7899274551541572