Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nicotiana_20tomentosiformis_20[refseq_20GCF_5F000390325.2_202013-05-
16] 159,548 sequences; 1,688,466,321 total letters
Query= NC_022646.1
Length=101818
Score E
Sequences producing significant alignments: (Bits) Value
seq110773 147 1e-30
seq102184 114 8e-21
seq11802 113 3e-20
seq72910 111 1e-19
seq91242 107 1e-18
seq67887 95.1 8e-15
seq68600 91.5 1e-13
seq2656 91.5 1e-13
seq73737 89.7 3e-13
seq35257 86.0 4e-12
>seq110773
Length=86849
Score = 147 bits (162), Expect = 1e-30
Identities = 170/229 (74%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 34749 TTCCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCG 34808
|||||||||||| |||||| |||| || | |||| ||||||||||||||| |||||||
Sbjct 41664 TTCCTCCCCTCAGCCTCAGTACCAAATGCAGGGTGGACTCCTTCTGAATGTTGTAGTCCG 41723
Query 34809 ATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCG 34868
||| |||| |||| |||| |||||||| || |||||||| | ||||||||| | |
Sbjct 41724 CAAGGGTGCGACCATCTTCCAACTGCTTTCCTGCAAAGATCAGCCTCTGCTGGTCTGGGG 41783
Query 34869 GCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGA 34928
| | |||||||||||| | || || |||||| | || | ||| || |
Sbjct 41784 GAATCCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCAATAGTGTCAGAACTTTCAA 41843
Query 34929 CATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
| || | || |||||||| || |||||||| || || |||||||||||
Sbjct 41844 CCTCCAGAGTGATGGTCTTGCCGGTGAGGGTTTTGACGAAGATCTGCAT 41892
Score = 122 bits (134), Expect = 6e-23
Identities = 158/216 (73%), Gaps = 8/216 (4%)
Strand=Plus/Plus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
||||||| ||||| ||| ||||||||||||||| || || | ||| | || ||||
Sbjct 42137 AGGACCAAGTGAAGGGTAGACTCCTTCTGAATGTTGTAATCGGCGAGGGTACGGCCATCC 42196
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
|| || ||||| ||||||||||||| | ||||||||| | || | |||||||| ||
Sbjct 42197 TCGAGCTGCTTGCCGGCGAAGATCAACCTCTGCTGGTCTGGAGGAATGCCCTCCTTATCC 42256
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGTTAT 34941
| ||||| ||||| || ||||||| ||| |||||| |||| ||| ||
Sbjct 42257 TGAATTTTGGCCTTGAC--AT--TATCGATGGTATCAGAACTCTCGACCTCAAGGGTGAT 42312
Query 34942 GGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
|| || || |||||||| || || |||||||||||
Sbjct 42313 TGTTTTGCCGGTGAGGGTTTTGACGAAGATCTGCAT 42348
Score = 122 bits (134), Expect = 6e-23
Identities = 158/216 (73%), Gaps = 8/216 (4%)
Strand=Plus/Plus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
||||||| ||||| ||| ||||||||||||||| || || | ||| | || ||||
Sbjct 42365 AGGACCAAGTGAAGGGTAGACTCCTTCTGAATGTTGTAATCGGCGAGGGTACGGCCATCC 42424
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
|| || ||||| ||||||||||||| | ||||||||| | || | |||||||| ||
Sbjct 42425 TCGAGCTGCTTGCCGGCGAAGATCAACCTCTGCTGGTCTGGAGGAATGCCCTCCTTATCC 42484
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGTTAT 34941
| ||||| ||||| || ||||||| ||| |||||| |||| ||| ||
Sbjct 42485 TGAATTTTGGCCTTGAC--AT--TATCGATGGTATCAGAACTCTCGACCTCAAGGGTGAT 42540
Query 34942 GGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
|| || || |||||||| || || |||||||||||
Sbjct 42541 TGTTTTGCCGGTGAGGGTTTTGACGAAGATCTGCAT 42576
Score = 113 bits (124), Expect = 3e-20
Identities = 156/216 (72%), Gaps = 8/216 (4%)
Strand=Plus/Plus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
||||| ||||||| ||| |||||||| ||||| || || | ||| | || ||||
Sbjct 41909 AGGACAAGGTGAAGGGTCGATTCCTTCTGGATGTTGTAATCAGCAAGGGTACGGCCATCC 41968
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
|| || ||||| || |||||||||| | ||||||||| | || | |||||||| ||
Sbjct 41969 TCGAGCTGCTTGCCCGCGAAGATCAACCTCTGCTGGTCTGGGGGAATGCCCTCCTTATCC 42028
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGTTAT 34941
| ||||| ||||| || ||||||| ||| |||||| |||| ||| ||
Sbjct 42029 TGAATTTTGGCCTTGAC--AT--TATCGATGGTGTCAGAACTCTCGACCTCAAGGGTGAT 42084
Query 34942 GGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
||||| || |||||||| || || |||||||||||
Sbjct 42085 AGTCTTGCCGGTGAGGGTTTTGACGAAGATCTGCAT 42120
Score = 104 bits (114), Expect = 2e-17
Identities = 153/216 (71%), Gaps = 8/216 (4%)
Strand=Plus/Plus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
||||||| ||||| ||| |||||||| ||||| || || | || | || | ||
Sbjct 42593 AGGACCAAGTGAAGGGTAGATTCCTTCTGGATGTTGTAATCGGCGAGAGTACGGCCGTCC 42652
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
|| || ||||| ||||||||||| || | |||||| ||| | || | || ||||||||
Sbjct 42653 TCAAGCTGCTTGCCGGCGAAGATAAGCCTTTGCTGATCTGGGGGAATTCCTTCCTTGTCC 42712
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGG----CCTCGACATCAACGGTTAT 34941
| ||||| ||| || | | |||||| | | |||||| || | |||||
Sbjct 42713 TGGATTTTGGCTTTTAC----GTTGTCGATTGTGTCGGAACTCTCGACCTCGAGAGTTAT 42768
Query 34942 GGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
||||||||| || ||||| || || |||||||||||
Sbjct 42769 GGTCTTTCCGGTAAGGGTTTTCACGAAGATCTGCAT 42804
Score = 82.4 bits (90), Expect = 5e-11
Identities = 149/216 (69%), Gaps = 8/216 (4%)
Strand=Plus/Plus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
||||| ||||||| ||| ||| ||||| || || ||||| | | | | | ||||
Sbjct 41453 AGGACAAGGTGAAGGGTTGACTCTTTCTGGATATTGTAGTCAGCCAAGGTCCTTCCATCC 41512
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
|| || ||||| || || ||||||| | |||||||| | || | |||||||||||
Sbjct 41513 TCGAGCTGCTTCCCAGCAAAGATCAACCTCTGCTGGTCCGGTGGGATACCCTCCTTGTCC 41572
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGTTAT 34941
| || || ||| || || | ||||| ||| | ||| || || | ||| ||
Sbjct 41573 TGGATCTTAGCTTTTAC--AT--TGTCGATGGTGTCAGAGCTCTCCACCTCCAAGGTGAT 41628
Query 34942 GGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
|||||| || || | ||||| || |||||||||||
Sbjct 41629 GGTCTTCCCAGTCAATGTCTTCACGAAGATCTGCAT 41664
>seq102184
Length=23720
Score = 114 bits (126), Expect = 8e-21
Identities = 162/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810
||||||||||| | || ||||| || | || ||||||||| |||||||||||||
Sbjct 1688 CCTCCCCTCAAACGCAAGACCAAATGGAGAGTCGACTCCTTCTGGATGTTATAGTCCGCA 1747
Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870
|| | | | || |||||||| || || || ||||||| || ||||||||| ||||
Sbjct 1748 AGAGTCCTGCCGTCCTCCAGTTGTTTACCAGCAAAGATCAAACGCTGCTGGTCTGGCGGG 1807
Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACA 34930
| ||||||||||| | || ||| |||||| | || | ||| ||| ||
Sbjct 1808 ATACCCTCCTTGTCTTGAATCTTTGCTTTGACATTGTCAATGGTATCAGAACTCTCAACC 1867
Query 34931 TCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978
|| | ||||| ||||| || || | ||||| ||||| |||||||||
Sbjct 1868 TCCAAAGTTATTGTCTTCCCAGTCAAAGTCTTGACAAAAATCTGCATG 1915
Score = 98.7 bits (108), Expect = 6e-16
Identities = 149/212 (70%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
||||| || || | ||| |||||| || ||||| ||||| | || | || ||||
Sbjct 2387 AGGACAAGATGGAGGGTAGACTCCTTTTGGATGTTGTAGTCAGCAAGAGTTCGTCCATCT 2446
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
|| || || ||||| || |||||||| | ||||| || | || | || ||||||||
Sbjct 2447 TCAAGCTGTTTTCCAGCAAAGATCAGCCTCTGCTGATCAGGAGGAATGCCTTCCTTGTCT 2506
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945
| || || |||||| | || | ||| |||||| |||| || ||||||
Sbjct 2507 TGAATCTTAGCTTTGACATTGTCAATGGTGTCAGAACTCTCGACCTCAAGAGTAATGGTC 2566
Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
||||| ||||| ||||| ||||||||||||||
Sbjct 2567 TTTCCGGTGAGTGTCTTAACAAAGATCTGCAT 2598
Score = 91.5 bits (100), Expect = 1e-13
Identities = 140/196 (71%), Gaps = 8/196 (4%)
Strand=Plus/Plus
Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845
||| ||||||||||| || || | | | | | | || || |||||||| ||||| ||
Sbjct 1951 CTCTTTCTGAATGTTGTAATCTGCCAATGTCCTCCCGTCCTCAAGTTGCTTCCCGGCAAA 2010
Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905
|||||||| |||||||| | || | || |||||||| | || ||| ||| || |
Sbjct 2011 GATCAGTCTCTGCTGGTCCGGAGGAATACCTTCCTTGTCTTGAATCTTTGCTTTTAC--A 2068
Query 34906 TGCTATCGAT--TCATTGGCC--TCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCT 34961
| | ||||| | || | || || |||| ||| |||||||| || || || ||||
Sbjct 2069 T--TGTCGATAGTATCTGAACTTTCAACTTCAAGGGTGATGGTCTTGCCGGTAAGTGTCT 2126
Query 34962 TTACAAAGATCTGCAT 34977
| ||||||||||||||
Sbjct 2127 TGACAAAGATCTGCAT 2142
Score = 86.0 bits (94), Expect = 4e-12
Identities = 146/212 (69%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
||||| || || | |||| ||||||||| ||||| || || | || | | ||||
Sbjct 2159 AGGACAAGATGGAGGGTGGACTCCTTCTGGATGTTGTAATCAGCAAGAGTTCTACCATCT 2218
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
|| |||||||| || || || |||| | ||| || || | || | |||||||||||
Sbjct 2219 TCAAGTTGCTTGCCAGCAAAAATCAACCTTTGTTGATCAGGAGGAATACCCTCCTTGTCC 2278
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945
| || ||| ||||| | || | || | |||||| |||| || || |||
Sbjct 2279 TGGATCTTTGCCTTGACATTGTCAATGGTGTCTGAGCTCTCGACCTCAAGCGTAATAGTC 2338
Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
||||| || ||||| || |||||||| |||||
Sbjct 2339 TTTCCAGTCAGGGTTTTGACAAAGATTTGCAT 2370
>seq11802
Length=78489
Score = 113 bits (124), Expect = 3e-20
Identities = 166/231 (72%), Gaps = 8/231 (3%)
Strand=Plus/Plus
Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810
|| ||||||| |||||| ||||| || | ||| ||||||||||| || ||||| |
Sbjct 56755 CCACCCCTCAGCCTCAGCACCAGATGGAGAGTGGATTCCTTCTGAATATTGTAGTCAGCA 56814
Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870
||| | || |||| || ||||||||||| |||||||||| | ||||| ||| | ||
Sbjct 56815 AGGGTACGACCATCCTCAAGTTGCTTTCCAGCGAAGATCAACCTCTGCTGATCTGGAGGA 56874
Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATT-CATTGG---CCTC 34926
| || || || || | ||||| |||||| || | || ||| || || |||
Sbjct 56875 ATGCCTTCTTTATCCTGGATTTTAGCTTTGAC--AT--TGTCAATTGTATCGGAACTCTC 56930
Query 34927 GACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
|| |||| || || |||||||| || | || |||||||||||||||||
Sbjct 56931 AACCTCAAGTGTAATAGTCTTTCCTGTCAAAGTTTTTACAAAGATCTGCAT 56981
Score = 89.7 bits (98), Expect = 3e-13
Identities = 147/212 (69%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
|| |||||||||| || || |||||||||||||| || | ||| | || ||||
Sbjct 55630 AGAACCAGGTGAAGAGTTGATTCTTTCTGAATGTTATAATCAGCAAGGGTACGACCATCC 55689
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
||||| ||||| || || || ||||| | ||||||||| | || | |||||||||||
Sbjct 55690 TCCAGCTGCTTACCAGCAAAAATCAGCCTCTGCTGGTCTGGTGGAATACCCTCCTTGTCC 55749
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945
| || ||| || || | || | || | ||| || || | ||| || |||
Sbjct 55750 TGAATCTTTGCCTTCACATTGTCAATGGTATCCGAGCTCTCAACCTCCAGGGTGATCGTC 55809
Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
|| || || | ||||| ||||| ||||||||
Sbjct 55810 TTCCCAGTCAAAGTCTTGACAAAAATCTGCAT 55841
Score = 86.0 bits (94), Expect = 4e-12
Identities = 150/216 (69%), Gaps = 8/216 (4%)
Strand=Plus/Plus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
|| || ||||| | |||| |||||| || ||||| ||||| | ||| | || ||||
Sbjct 56998 AGAACAAGGTGGAGGGTGGACTCCTTTTGGATGTTGTAGTCAGCAAGGGTACGACCATCC 57057
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
|| ||||||||||| || ||||||| | |||||| || | || | || ||||||||
Sbjct 57058 TCAAGTTGCTTTCCAGCAAAGATCAACCTTTGCTGATCCGGAGGAATGCCTTCCTTGTCC 57117
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGTTAT 34941
| || ||| || || || |||| || || | ||| || || | || ||
Sbjct 57118 TGAATCTTTGCCTTAAC--AT--TATCAATTGTGTCTGAGCTCTCAACCTCGAGAGTGAT 57173
Query 34942 GGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
||||| || || | || |||||||||||||||||
Sbjct 57174 AGTCTTCCCAGTTAAAGTTTTTACAAAGATCTGCAT 57209
Score = 84.2 bits (92), Expect = 1e-11
Identities = 151/218 (69%), Gaps = 12/218 (6%)
Strand=Plus/Plus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
||||| ||||| | ||| |||||| || || || ||||| | || | || ||||
Sbjct 57226 AGGACAAGGTGGAGGGTAGACTCCTTTTGGATATTGTAGTCAGCAAGAGTTCGGCCATCC 57285
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
|| | |||||||| || ||||||| | |||||| ||| | || | || ||||| ||
Sbjct 57286 TCTAACTGCTTTCCAGCAAAGATCAACCTTTGCTGATCTGGAGGAATTCCTTCCTTATCT 57345
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGC------CTCGACATCAACGGTT 34939
| || ||| || || || | ||||| | || | ||| || || | |||
Sbjct 57346 TGGATCTTTGCCTTAAC--AT--TGTCGAT--AGTGTCTGAACTCTCAACCTCGAGGGTG 57399
Query 34940 ATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
||||| || || |||||||||||||||||||| |||||
Sbjct 57400 ATGGTTTTGCCAGTGAGGGTCTTTACAAAGATTTGCAT 57437
>seq72910
Length=47125
Score = 111 bits (122), Expect = 1e-19
Identities = 139/191 (73%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 34787 TCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAG 34846
|||||||| ||||| || || | |||| | || |||| ||||| || |||||||||||
Sbjct 43107 TCCTTCTGGATGTTGTAATCAGCTAGGGTTCGGCCATCCTCCAGCTGTTTTCCGGCGAAA 43166
Query 34847 ATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGAT 34906
|| || || |||||||| | || | || |||||||| | || ||| || |||
Sbjct 43167 ATGAGCCGCTGCTGGTCCGGTGGAATGCCTTCCTTGTCCTGGATCTTTGCCTTCACGTTG 43226
Query 34907 GCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACA 34966
| || | || || ||||| |||| ||| |||||||| ||||| ||||| || ||
Sbjct 43227 TCGATTGTGTCGGAGGATTCGACCTCAAGGGTGATGGTCTTACCCGTTAGGGTTTTCACG 43286
Query 34967 AAGATCTGCAT 34977
|||||||||||
Sbjct 43287 AAGATCTGCAT 43297
>seq91242
Length=50504
Score = 107 bits (118), Expect = 1e-18
Identities = 151/212 (71%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
||||| ||||||| |||| ||||||||||||||| ||||| | || ||| | ||||
Sbjct 24898 AGGACAAGGTGAAGGGTGGACTCCTTCTGAATGTTGTAGTCGGCAAGAGTGCACCCATCC 24957
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
|| || |||||||| || ||||||| | ||||||||| | || | || ||||||||
Sbjct 24958 TCAAGCTGCTTTCCAGCAAAGATCAACCTCTGCTGGTCTGGAGGGATGCCTTCCTTGTCC 25017
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945
| || || || || | || | || | ||| || |||| ||| ||||||
Sbjct 25018 TGGATCTTCGCCTTAACATTGTCAATGGTGTCGGAGTTCTCAACCTCAAGGGTGATGGTC 25077
Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
|| || || | || |||||||| ||||||||
Sbjct 25078 TTCCCAGTCAATGTTTTTACAAAAATCTGCAT 25109
Score = 91.5 bits (100), Expect = 1e-13
Identities = 151/216 (70%), Gaps = 8/216 (4%)
Strand=Plus/Plus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
|| || ||||||| |||| || ||||| |||||||| || | ||| | || ||||
Sbjct 24214 AGCACGAGGTGAAGGGTGGATTCTTTCTGGATGTTATAATCTGCAAGGGTACGACCATCC 24273
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
||||| ||||| || || || |||| | ||||| ||| | || | |||||||||||
Sbjct 24274 TCCAGCTGCTTACCAGCAAAAATCAACCTCTGCTGATCTGGGGGAATACCCTCCTTGTCC 24333
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGTTAT 34941
| || ||| ||| || || |||| || ||| | ||| || || | || ||
Sbjct 24334 TGAATCTTTGCTTTCAC--AT--TATCAATAGTATCAGAGCTCTCCACCTCCAAAGTGAT 24389
Query 34942 GGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
||||| || || || ||||| ||||| ||||||||
Sbjct 24390 AGTCTTCCCAGTTAGAGTCTTGACAAATATCTGCAT 24425
Score = 89.7 bits (98), Expect = 3e-13
Identities = 152/218 (70%), Gaps = 12/218 (6%)
Strand=Plus/Plus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
||||| ||||||| |||| ||||| || ||||| ||||| | || |||| ||||
Sbjct 25126 AGGACAAGGTGAAGGGTGGATTCCTTTTGGATGTTGTAGTCGGCAAGAGTGCGGCCATCC 25185
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
|| || |||||||| || ||||||| | ||||| || | || | || ||||||||
Sbjct 25186 TCTAGCTGCTTTCCAGCAAAGATCAACCTCTGCTGATCGGGAGGGATTCCTTCCTTGTCC 25245
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGC------CTCGACATCAACGGTT 34939
| || || ||||| || |||| || | || | ||| || || | ||
Sbjct 25246 TGAATCTTAGCCTTGAC--AT--TATCAAT--AGTGTCGGAACTCTCAACCTCGAGAGTA 25299
Query 34940 ATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
||||| ||||| || || |||||||||||||| |||||
Sbjct 25300 ATGGTTTTTCCGGTAAGCGTCTTTACAAAGATTTGCAT 25337
>seq67887
Length=198949
Score = 95.1 bits (104), Expect = 8e-15
Identities = 148/212 (70%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
|| |||| ||||| ||| ||||||||| ||||| || || | ||| | || | ||
Sbjct 190742 AGAACCAAGTGAAGGGTAGACTCCTTCTGGATGTTGTAATCAGCGAGGGTTCGGCCGTCT 190801
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
|| |||||||||||||| |||||||| | |||||||||| | || | ||||| || ||
Sbjct 190802 TCAAGTTGCTTTCCGGCAAAGATCAGCCTTTGCTGGTCTGGTGGGATTCCCTCTTTATCC 190861
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945
| ||||| || ||| | || | || | || || |||| ||| || ||
Sbjct 190862 TGGATTTTCGCCTTAACGTTATCAATAGTGTCGGAGCTTTCAACTTCAAGGGTGATTGTT 190921
Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
|| || || ||||| || || ||||| |||||
Sbjct 190922 TTCCCGGTTAGGGTTTTGACGAAGATTTGCAT 190953
Score = 89.7 bits (98), Expect = 3e-13
Identities = 147/212 (69%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
||||| ||||| | |||| ||||||||||||||| || || | ||| | || ||||
Sbjct 190286 AGGACAAGGTGCAGGGTGGACTCCTTCTGAATGTTGTAATCAGCGAGGGTTCGTCCATCT 190345
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
|||| ||||||||| || |||||||| | ||||| || | || | |||||||||||
Sbjct 190346 TCCAATTGCTTTCCCGCAAAGATCAGCCTCTGCTGATCCGGGGGAATACCCTCCTTGTCC 190405
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945
| || || ||| || | || | ||| || || || | || |||||
Sbjct 190406 TGAATCTTAGCTTTCACATTGTCAATAGTATCAGAACTTTCCACCTCCAAAGTGATGGTT 190465
Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
|| || || | ||||| ||||| ||||||||
Sbjct 190466 TTCCCGGTCAACGTCTTCACAAAAATCTGCAT 190497
>seq68600
Length=37585
Score = 91.5 bits (100), Expect = 1e-13
Identities = 137/192 (71%), Gaps = 2/192 (1%)
Strand=Plus/Plus
Query 34787 TCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAG 34846
|||||||||||| |||| || | || | || |||| | ||||| ||||| || ||
Sbjct 32392 TCCTTCTGAATGCTATAATCAGCAAGTGTTCGACCATCCCCGAGTTGTTTTCCAGCAAAA 32451
Query 34847 ATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGAT 34906
|||| | ||| || ||| | || | || |||||||| || | | ||||||| | |
Sbjct 32452 ATCAACCTTTGTTGATCTAGAGGAATTCCTTCCTTGTC-TTGAATCTTTGTTTTAACATT 32510
Query 34907 G-CTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTAC 34965
| | || | ||| ||| || || | |||||||||||||| ||||||||||| ||
Sbjct 32511 GTCAATAGTGTCAGAACTCTCAACCTCGAGTGTTATGGTCTTTCCAGTGAGGGTCTTAAC 32570
Query 34966 AAAGATCTGCAT 34977
|||||| |||||
Sbjct 32571 AAAGATTTGCAT 32582
>seq2656
Length=23473
Score = 91.5 bits (100), Expect = 1e-13
Identities = 157/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810
||||||||||| | || ||||| |||| || ||||||||| |||||||| || |
Sbjct 20270 CCTCCCCTCAAACGCAACACCAGATGAAGTGTCGACTCCTTCTGTATGTTATAATCAGCA 20211
Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870
|| | | |||| || |||||||| || || || |||| ||| ||||||||| | ||
Sbjct 20210 AGTGTCCTTCCATCTTCAAGTTGCTTCCCTGCAAATATCAATCGCTGCTGGTCTGGGGGA 20151
Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACA 34930
| ||| ||||| || | ||||| || ||| | || | || ||| ||
Sbjct 20150 ATCCCTTCCTTATCTTGAATTTTGGCCTTCACGTTATCAATTGTGTCCGAACTCTCAACC 20091
Query 34931 TCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978
|| | ||| || || ||||| || | ||||| || ||||| ||||||
Sbjct 20090 TCCAAGGTGATAGTTTTTCCTGTCAAAGTCTTGACGAAGATTTGCATG 20043
Score = 84.2 bits (92), Expect = 1e-11
Identities = 159/232 (69%), Gaps = 8/232 (3%)
Strand=Plus/Minus
Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810
|||||||||| | || |||| |||| ||| ||||||||||| || || || |
Sbjct 20042 CCTCCCCTCAGACGAAGCACCAAATGAAGGGTTGATTCCTTCTGAATATTGTAATCTGCA 19983
Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870
||| | | |||| || ||||| || || || || |||| | ||||||||| | ||
Sbjct 19982 AGGGTCCTTCCATCCTCAAGTTGTTTCCCAGCAAATATCAACCTCTGCTGGTCTGGAGGA 19923
Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTC 34926
| ||||||||||| | || ||| || || || | ||||| || | |||
Sbjct 19922 ATACCCTCCTTGTCCTGGATCTTTGCCTTTAC--AT--TGTCGATGGTATCTGAGCTCTC 19867
Query 34927 GACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978
|| |||| ||| || ||||| ||||| | || || ||||| |||||||||
Sbjct 19866 AACTTCAAGGGTGATCGTCTTGCCCGTTAAAGTTTTAACAAAAATCTGCATG 19815
>seq73737
Length=23676
Score = 89.7 bits (98), Expect = 3e-13
Identities = 156/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810
|| ||||||||||| || || ||||||| |||| |||||||| |||||||| || |
Sbjct 14146 CCACCCCTCAACCTGAGAACAAGGTGAAGGGTGGATTCCTTCTGGATGTTATAATCAGCC 14205
Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870
|| | | |||| || | |||||| || || || |||| | ||||| || | ||
Sbjct 14206 AGAGTTCTTCCATCTTCTAATTGCTTCCCAGCAAAAATCAACCTCTGCTGATCAGGTGGG 14265
Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACA 34930
| ||||||||||| | ||||| || || |||||| || | ||| ||
Sbjct 14266 ATACCCTCCTTGTCTTGAATTTTAGCCTTAACATTGTCTATCGTGTCCGAGCTCTCAACC 14325
Query 34931 TCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
|| | || || || ||||| || | |||||| ||||| || |||||
Sbjct 14326 TCCAACGTGATTGTTTTTCCAGTTAAGGTCTTAACAAAAATTTGCAT 14372
Score = 86.0 bits (94), Expect = 4e-12
Identities = 146/212 (69%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
|| || ||||||| || |||||| ||||| || || || | || | ||| ||||
Sbjct 14617 AGAACAAGGTGAAGTGTCGACTCCTTTTGAATATTGTAATCTGCGAGAGTACGCCCATCC 14676
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
|| || || ||||| || ||||||| ||||| || ||| | || | || || |||||
Sbjct 14677 TCGAGCTGTTTTCCTGCAAAGATCAAACGTTGTTGATCTGGTGGAATACCTTCTTTGTCC 14736
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945
| ||||| ||| || | |||| || ||| || || | ||||| |||
Sbjct 14737 TGGATTTTGGCTTTAACATTGTCGATCGTGTCTGAACTCTCAACTTCGAGAGTTATAGTC 14796
Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
|| || || |||||||| ||||||||||||||
Sbjct 14797 TTGCCAGTCAGGGTCTTCACAAAGATCTGCAT 14828
>seq35257
Length=66376
Score = 86.0 bits (94), Expect = 4e-12
Identities = 146/212 (69%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
||||| ||||| | || |||||| |||||||||||||| | || | | | ||||
Sbjct 817 AGGACTAGGTGGAGTGTTGACTCCTTTTGAATGTTATAGTCAGCGAGAGTCCTCCCATCT 876
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
|||| ||||||||| || || ||||| | ||||| || | || | || ||||||||
Sbjct 877 TCCAATTGCTTTCCTGCAAATATCAGCCTCTGCTGATCCGGTGGGATGCCTTCCTTGTCT 936
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945
| |||||| || || | |||| || | ||| || || | || || ||
Sbjct 937 TGAATTTTTGCCTTAACATTGTCAATCGTGTCCGAGCTCTCAACTTCCAATGTGATTGTT 996
Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
|| || || | |||||| |||||||| |||||
Sbjct 997 TTCCCGGTTAAGGTCTTAACAAAGATTTGCAT 1028
Score = 82.4 bits (90), Expect = 5e-11
Identities = 155/228 (68%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 34750 TCCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGA 34809
||| ||||||| |||||| || || || | || |||||||||||| || || || |
Sbjct 573 TCCACCCCTCAGCCTCAGCACAAGATGGAGAGTAGACTCCTTCTGAATATTGTAATCTGC 632
Query 34810 TAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGG 34869
|| | | |||| |||| ||||| || || ||||| || | ||||||||| | ||
Sbjct 633 AAGTGTCCTACCATCCTCCAACTGCTTCCCAGCAAAGATAAGCCTCTGCTGGTCTGGTGG 692
Query 34870 CACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGAC 34929
| |||||||| || | || || || || | |||| || | ||| ||
Sbjct 693 AATACCCTCCTTATCCTGAATCTTCGCCTTCACATTGTCAATCGTGTCTGAGCTCTCAAC 752
Query 34930 ATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
|| | || ||||| |||||||| | ||| || |||||||| |||||
Sbjct 753 TTCTAATGTGATGGTTTTTCCCGTTAAGGTTTTAACAAAGATTTGCAT 800
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 325059493200212
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |