Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nicotiana_20tomentosiformis_20[refseq_20GCF_5F000390325.2_202013-05- 16] 159,548 sequences; 1,688,466,321 total letters Query= NC_028104.1 Length=73689 Score E Sequences producing significant alignments: (Bits) Value seq89987 91.5 7e-14 >seq89987 Length=353032 Score = 91.5 bits (100), Expect = 7e-14 Identities = 155/223 (70%), Gaps = 4/223 (2%) Strand=Plus/Minus Query 65087 CGTGTTCCAAACTGACCATTTGGCATTAATAAATTAATATTGTTTGAACCAATAAAATTC 65146 || || ||||| ||||||||||| || | ||| | ||| || |||| | | | | Sbjct 134619 CGAGTGCCAAATTGACCATTTGGTTGCAAAAGATTTACATTATTGCTGCCAACATAGTCC 134560 Query 65147 TGAGCCATTCCGATAAT--TGCTGCATTTAAACTCGCTTCACCGTGATGATATCCTGAAT 65204 || ||||| || || || |||||| | | |||| ||||| || ||||| |||| | Sbjct 134559 TGTGCCATGCCAATGATGGTGCTGC--TAAGACTCTGCTCACCATGGTGATAAGCTGAGT 134502 Query 65205 GTTCAGAGACATATCCACTAAATTGAGCAACTTTTATTTCCGTTGTTAAATTCTTTTTAA 65264 | ||||||||||| ||| |||||| | ||||||| |||| | || ||| | |||| Sbjct 134501 GCTCAGAGACATAACCAGAAAATTGGGAAACTTTTGCTTCCTTAACAAAGTTCCTCTTAA 134442 Query 65265 ATGCAGAATACAATATTTTCCGTAAACTAATTTTCAATCCATC 65307 ||||| | ||| || |||| | || |||||| ||||| Sbjct 134441 ATGCACAGAACAGAATCTTCCTTTGACCCGGTTTCAAACCATC 134399 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 235221722302200