Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nothapodytes_20nimmoniana_20[genbank_20GCA_5F002091855.1_202017-04- 03] 2,301 sequences; 1,365,272 total letters Query= NC_006820.1 Length=196280 Score E Sequences producing significant alignments: (Bits) Value seq7 468 6e-127 seq476 279 6e-70 seq544 114 2e-20 >seq7 Length=7073 Score = 468 bits (518), Expect = 6e-127 Identities = 618/853 (72%), Gaps = 12/853 (1%) Strand=Plus/Minus Query 137875 TGGATGACTGGATTAAACGAGATCGCTTTGTATTTGTGGGTTGGTCTGGACTACTACTTT 137934 ||||||||||| | | || || || || ||||| || ||||| || ||| | || | Sbjct 847 TGGATGACTGGTTACGGAGGGACCGTTTCGTTTTTGTAGGCTGGTCCGGCCTATTGCTCT 788 Query 137935 TTCCCACTGCTTATTTGGCCCTTGGTGGCTGGCTTACTGGCACAACGTTTGTTACAAGCT 137994 |||| ||| ||||| || | || || ||| | || || ||||| ||||| || | Sbjct 787 TTCCTTGTGCCTATTTCGCTTTAGGGGGTTGGTTCACAGGTACAACCTTTGTAACTTCGT 728 Query 137995 GGTACACCCACGGGTTGGCGTCTAGTT---ATCTTGAAGGCGCTAATTTCCTCACAGCAG 138051 |||| ||||| || ||||| ||||| || | |||||| |||||| | || || | Sbjct 727 GGTATACCCATGGATTGGC---TAGTTCCTATTTGGAAGGCTGCAATTTCTTAACTGCCG 671 Query 138052 CTGTTTCGACTCCTGCTGATGCTATGGGTCATTCTCTTCTTCTACTTTGGGGTCCTGAGT 138111 | ||||| ||||||||| || | | | |||||| | | ||||| ||||||||||| Sbjct 670 CAGTTTCTACTCCTGCTAATAGTTTAGCGCATTCTTTATTGCTACTATGGGGTCCTGAAG 611 Query 138112 CTCAAGGAGATATCGTCCGCTGGTTCCAACTTGGGGGACTCTGGACTTTTGTGGCGCTCC 138171 | || |||||| | || |||| ||| | || || || ||||||||||| || ||| Sbjct 610 CACAGGGAGATTTTACTCGTTGGTGTCAATTAGGTGGTCTATGGACTTTTGTTGCTTTCC 551 Query 138172 ACGGGGCCTTTAGTCTGATTGGATTCATGCTTCGCCAGTTTGAGATCTCTCG-TCTGGTA 138230 | || || || | || || || |||||||| || || || || | |||| |||| | Sbjct 550 ATGGCGCTTTCGGACTAATAGGTTTCATGCTACGTCAATTCGAACTTGCTCGATCTGTT- 492 Query 138231 GGCA--TCCGTCCCTACAACGCAATCGCATTCTCTGGTCCCATCGCTGTGTTCGTCAGCG 138288 || | || || || || |||||||||||||||| ||| || ||||| || || | Sbjct 491 --CAATTGCGACCTTATAATGCAATCGCATTCTCTGCTCCAATTGCTGTTTTTGTTTCTG 434 Query 138289 TGTTCCTGATGTATCCTTTGGGTCAATCCAGTTGGTTCTTTGCTCCCTCCTTTGGTGTGG 138348 | |||||||| ||||| | ||||| || ||||||||||||| || ||||| || | Sbjct 433 TATTCCTGATTTATCCACTAGGTCAGTCTGGTTGGTTCTTTGCGCCTAGTTTTGGCGTAG 374 Query 138349 CAGCAATCTTCCGATTCCTGTTGTTCCTTCAGGGTTTCCATAACTGGACCCTCAACCCCT 138408 |||| || || |||||| | | || |||| || || ||||| ||||| | ||||| | Sbjct 373 CAGCTATATTTCGATTCATCCTCTTTTTTCAAGGGTTTCATAATTGGACGTTGAACCCAT 314 Query 138409 TTCATATGATGGGCGTAGCAGGTATTCTTGGTGGTGCTCTGCTCTGTGCTATTCATGGTG 138468 ||||||||||||| || || ||| | | || | |||| |||| || ||||||||||||| Sbjct 313 TTCATATGATGGGAGTTGCCGGTGTATTGGGCGCTGCTTTGCTATGCGCTATTCATGGTG 254 Query 138469 CTACAGTAGAAAATACTTTGTATGAAGATGGCGAACAATCAAATACTTTTAAAGCATTTG 138528 |||| |||||||||||||| | ||||||||| || ||||||| || || ||| Sbjct 253 CTACCGTAGAAAATACTTTATTTGAAGATGGTGATGGTGCAAATACATTCCGTGCTTTTA 194 Query 138529 AACCTACTCAAGAAGAAGAAACCTATTCAATGGTTACTGCTAACCGTTACTGGTCGCAAA 138588 | || ||||||| |||||||| ||||||||||| || |||||||| | ||||| |||| Sbjct 193 ACCCAACTCAAGCGGAAGAAACTTATTCAATGGTCACCGCTAACCGCTTTTGGTCCCAAA 134 Query 138589 TCTTTGGAATTGCTTTTAGTAATAAGCGTTGGCTTCACTTCTTTATGCTCTTTGTTCCCG 138648 | ||||| |||||||| ||||| |||||| | || ||||||||| | ||||| || | Sbjct 133 TTTTTGGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGTACCAG 74 Query 138649 TCATGGGTCTCTGGACTAGTAGTATTGGTATTATTGGTCTTGCTCTTAACCTACGAGCGT 138708 | | ||| | |||| ||| | |||| | | ||||| ||||| |||||||| || | Sbjct 73 TAACCGGTTTATGGATGAGTGCTCTTGGAGTAGTCGGTCTGGCTCTGAACCTACGCGCCT 14 Query 138709 ATGATTTCGTATC 138721 |||| || || || Sbjct 13 ATGACTTTGTTTC 1 >seq476 Length=815 Score = 279 bits (308), Expect = 6e-70 Identities = 335/447 (75%), Gaps = 9/447 (2%) Strand=Plus/Minus Query 135374 TTCTGCGAGTGGGTTACCAGCACCGACAACCGCCTCTATGTGGGTTGGTTTGGAACGCTG 135433 ||||| | ||| | || ||||| || ||||| || || | || |||||||| | Sbjct 442 TTCTGTAACTGGATAACTAGCACTGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTA 383 Query 135434 ATGATTCCTACTCTTCTCG-CAGCTGCTATCTGC-TTTATTGTTGCTTTCATCGCTGCAC 135491 ||||| ||||| ||| | | | || || |||| |||||| | || ||||| ||||| | Sbjct 382 ATGATCCCTAC-CTTATTGACCGCAACT-TCTGTATTTATTATCGCCTTCATTGCTGCTC 325 Query 135492 CTCCCGTCGATATTGACGGCATCCGCGAACCTGTTGCTGGTTCTCTAATGTACGGAAATA 135551 |||| || |||||||| || || || ||||||||| |||| |||||| | || ||||| | Sbjct 324 CTCCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTCTACTTTATGGAAACA 265 Query 135552 ACATCATCTCTGGTGCTGTTATCCCTTCTA--GCAACGCCATCGGCCTTCACTTCTATCC 135609 |||| || || ||||| |||| ||| || ||| || || || | ||||| || || Sbjct 264 ACATTATTTCAGGTGCCATTATTCCTACTTCTGCA--GCTATAGGTTTGCACTTTTACCC 207 Query 135610 CATCTGGGAAGCTGCTTCTCTTGATGAGTGGCTATATAATGGTGGTCCTTATCAACTAGT 135669 || |||||||| || || ||||||| ||| |||| ||||||||||||||| ||||| | Sbjct 206 AATATGGGAAGCGGCATCCGTTGATGAATGGTTATACAATGGTGGTCCTTATGAACTAAT 147 Query 135670 GGTCTTCCACTTCCTTATCGGTGTCTTCTCTTACATGGGTCGCGAGTGGGAACTCTCTTA 135729 || | |||||| | | ||||| | |||||||||||| |||||||| || | | Sbjct 146 TGTTCTACACTTCTTACTTGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAGCT-TAGTT 88 Query 135730 CCGACTGGGTATGCGCCCTTGGATTTGTGTCGCTTACTCAGCCCCTGTTGCCGCTGCTAC 135789 ||| || |||||||| ||||||||| ||| || || ||||| || ||||| |||||||| Sbjct 87 CCGTCTAGGTATGCGACCTTGGATTGCTGTTGCATATTCAGCTCCCGTTGCAGCTGCTAC 28 Query 135790 TGCTGTTTTCCTGGTCTACCCCTTTGG 135816 |||||||||| || ||||||| |||| Sbjct 27 TGCTGTTTTCTTGATCTACCCAATTGG 1 >seq544 Length=768 Score = 114 bits (126), Expect = 2e-20 Identities = 145/198 (73%), Gaps = 1/198 (1%) Strand=Plus/Plus Query 136130 CGTTCGCTACACTTTTTCCTTGCTGCTTGGCCTGTTGTCGGTATCTGGTTTGCTGCCCTG 136189 |||||| ||||||| ||||| || ||||||||||| || ||||||||||| |||| | Sbjct 1 CGTTCGTTACACTTCTTCCTAGCGGCTTGGCCTGTAGTAGGTATCTGGTTCACTGCTTTA 60 Query 136190 GGCGTATCTACGATGGCGTTCAACCTCAATGGATTCAACTTCAACCAGTCCATTGTATCT 136249 || | || ||||| |||||||| ||||| ||||| |||||||| ||| | || | Sbjct 61 GGTATTAGCACTATGGCTTTCAACCTAAATGGTTTCAATTTCAACCAATCCGTGGTTGAT 120 Query 136250 TCTGAAGGTCGTGTACTCAACACCTGGGCAGATGTGCTGAATCGTGCTGGTCTGGGTATG 136309 | |||| |||||| | || || ||||| ||| | | | ||||| || | |||| Sbjct 121 AGTCAAGGACGTGTAATTAATACTTGGGCTGATAT-CATTACCGTGCGAACCTTGATATG 179 Query 136310 GAGGTGATGCACGAGCGT 136327 || || ||||| || ||| Sbjct 180 GAAGTTATGCATGAACGT 197 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 627949938070400