Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nothapodytes_20nimmoniana_20[genbank_20GCA_5F002091855.1_202017-04- 03] 2,301 sequences; 1,365,272 total letters Query= NC_015569.1 Length=178563 Score E Sequences producing significant alignments: (Bits) Value seq476 248 1e-60 >seq476 Length=815 Score = 248 bits (274), Expect = 1e-60 Identities = 314/428 (73%), Gaps = 3/428 (1%) Strand=Plus/Plus Query 84530 GAATACAGCAGATGCCGCTGCAACTGGAGCAGAGTAAGCAACACAGATCCATGGACGCAT 84589 ||| ||||||| || |||||||| ||||| || || |||||| ||||| || ||||| Sbjct 18 GAAAACAGCAGTAGCAGCTGCAACGGGAGCTGAATATGCAACAGCAATCCAAGGTCGCAT 77 Query 84590 ACCGAGACGATATGAAAGTTCCCATTCACGACCCATGTAAGCAAATGCACCAATCAGGAA 84649 ||| ||||| | || | ||||| ||||||||||||||| | | |||||| | ||| Sbjct 78 ACCTAGACGGAACTAA-GCTCCCACTCACGACCCATGTAACAAGCTACACCAAGTAAGAA 136 Query 84650 GTGAAAGACAACAAGTTGATAAGGTCCACCATTATATAGCCATTCGTCCATACTTGCTGC 84709 ||| | |||| |||| |||||| |||||||| |||| |||||| || | ||| || Sbjct 137 GTGTAGAACAATTAGTTCATAAGGACCACCATTGTATAACCATTCATCAACGGATGCCGC 196 Query 84710 TTCCCAAATAGGATAGAAATGTAGACCAATAGCATTAGAGGATGGAACTACGGCACCAGA 84769 |||||| || || || || || | ||| ||||| ||| | |||| | |||||| || Sbjct 197 TTCCCATATTGGGTAAAAGTGCAAACCTATAGCTGCAGAAGTAGGAATAATGGCACCTGA 256 Query 84770 AATGATGTTGTTTCCGTACATGAGAGAACCAGCGACTGGCTCACGGATACCGTCAATATC 84829 ||| ||||||||||| || | ||||| |||| || || ||||| ||||| |||||||| Sbjct 257 AATAATGTTGTTTCCATAAAGTAGAGATCCAGAAACAGGTTCACGAATACCATCAATATC 316 Query 84830 AACTGGGGGTGCACCAACGAATGCAATGATGAA-ACAGACAGTGGCAGCAAGTAGAGTTG 84888 ||||| || ||| ||| ||| || || || || ||||| ||| || | | || || | Sbjct 317 TACTGGAGGAGCAGCAATGAAGGCGATAATAAATACAGA-AGTTGCGGTCAATAAGGTAG 375 Query 84889 GAATCATAAGAGTTCCAAACCAACCAACATAGATACGGTTGTTAGTGGAGGTGACCCAAT 84948 | ||||| | | |||||||| |||| || | |||||| | |||| || | ||| | Sbjct 376 GGATCATTAAAACACCAAACCATCCAATGTAAAGACGGTTTTCAGTGCTAGTTATCCAGT 435 Query 84949 CACAGAAG 84956 ||||||| Sbjct 436 TACAGAAG 443 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571257168743080