Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nothapodytes_20nimmoniana_20[genbank_20GCA_5F002091855.1_202017-04- 03] 2,301 sequences; 1,365,272 total letters Query= NC_016656.1 Length=45890 Score E Sequences producing significant alignments: (Bits) Value seq544 134 4e-27 >seq544 Length=768 Score = 134 bits (148), Expect = 4e-27 Identities = 168/228 (74%), Gaps = 3/228 (1%) Strand=Plus/Plus Query 26558 CGTTCTCTTCATTTCTTTCTTGCTACTTGGCCGGTTGTTGGCATATGGCTGACATCTATG 26617 ||||| | || ||||| || || ||||||| || || || || ||| | || || | Sbjct 1 CGTTCGTTACACTTCTTCCTAGCGGCTTGGCCTGTAGTAGGTATCTGGTTCACTGCTTTA 60 Query 26618 GGTATCTGCACAATGGCATTTAACCTAAATGGTTTTAACTTTAACCAGTCAGTAGTAGAT 26677 ||||| |||| ||||| || |||||||||||||| || || ||||| || || || ||| Sbjct 61 GGTATTAGCACTATGGCTTTCAACCTAAATGGTTTCAATTTCAACCAATCCGTGGTTGAT 120 Query 26678 GTTAATGGAAAGATAATACCTACATGGGCTGATGT-ATTAAACCGAGCTAACCTCGGCTT 26736 | | ||| |||| ||| ||||||||| | ||| |||| || ||||| | | Sbjct 121 AGTCAAGGACGTGTAATTAATACTTGGGCTGATATCATT--ACCGTGCGAACCTTGATAT 178 Query 26737 TGAAGTTATGCACGAGCGTAATGCTCATAACTTTCCACTTGACTTAGC 26784 ||||||||||| || ||||||||||||| |||||| || ||| |||| Sbjct 179 GGAAGTTATGCATGAACGTAATGCTCATAGCTTTCCTCTAGACCTAGC 226 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 146722390792824