Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nothapodytes_20nimmoniana_20[genbank_20GCA_5F002091855.1_202017-04- 03] 2,301 sequences; 1,365,272 total letters Query= NC_016659.1 Length=47536 Score E Sequences producing significant alignments: (Bits) Value seq476 237 5e-58 seq544 111 5e-20 >seq476 Length=815 Score = 237 bits (262), Expect = 5e-58 Identities = 319/443 (72%), Gaps = 1/443 (0%) Strand=Plus/Plus Query 25993 CCAAAAGGGTAGACTAAGAATACAGCAAATGCTGCTGCAACAGGGGCTGAATAAGCTACA 26052 |||| ||||||| ||||| |||||| || |||||||| || |||||||| || ||| Sbjct 1 CCAATTGGGTAGATCAAGAAAACAGCAGTAGCAGCTGCAACGGGAGCTGAATATGCAACA 60 Query 26053 CATATCCACGGCCTCATGCCTAGTCTATAACTAAGTTCCCATTGTCGTCCCAAGTAAGCT 26112 ||||| || | ||| ||||| | ||||||| ||||| | || |||| |||| Sbjct 61 GCAATCCAAGGTCGCATACCTAGACGG-AACTAAGCTCCCACTCACGACCCATGTAACAA 119 Query 26113 GAGATGCCGATGAGAAAGTGGAACACAATAAGTTGATATGGTCCACCGTTATACAACCAC 26172 | | || | | ||||| | ||||| |||| ||| || ||||| || || ||||| Sbjct 120 GCTACACCAAGTAAGAAGTGTAGAACAATTAGTTCATAAGGACCACCATTGTATAACCAT 179 Query 26173 TCGTCGAGGGTTGCAGCTTCCCAGATTGGGTAGAAGTGAAGACCGATTGCGTTAGATGAC 26232 || || | || ||| |||||||| |||||||| ||||| | ||| || || ||| | Sbjct 180 TCATCAACGGATGCCGCTTCCCATATTGGGTAAAAGTGCAAACCTATAGCTGCAGAAGTA 239 Query 26233 GGGACGATTGCCCCTGAGATGATGTTGTTTCCATAGAGTAATGCTCCTGAGACAGGCTCA 26292 || | || || ||||| || |||||||||||||| |||| | ||| || ||||| ||| Sbjct 240 GGAATAATGGCACCTGAAATAATGTTGTTTCCATAAAGTAGAGATCCAGAAACAGGTTCA 299 Query 26293 CGAATACCATCTATATCCACGGGAGGCGCAGCAACAAATGCAATTAAAAATGCTGTCACT 26352 ||||||||||| ||||| || ||||| ||||||| || || || | |||| | | | Sbjct 300 CGAATACCATCAATATCTACTGGAGGAGCAGCAATGAAGGCGATAATAAATACAGAAGTT 359 Query 26353 GCTGTTAAAAGTGCAGGGATCATTAGTACCCCAAACCACCCCACATAGAGGCGGTTGTTT 26412 || || || | | ||||||||||| || |||||||| || | || || ||||| | Sbjct 360 GCGGTCAATAAGGTAGGGATCATTAAAACACCAAACCATCCAATGTAAAGACGGTTTTCA 419 Query 26413 GTACTTGTAACCCAGTCACATAA 26435 || || || | ||||| ||| || Sbjct 420 GTGCTAGTTATCCAGTTACAGAA 442 >seq544 Length=768 Score = 111 bits (122), Expect = 5e-20 Identities = 158/221 (71%), Gaps = 1/221 (0%) Strand=Plus/Minus Query 25453 GCTAAGTCAAGAGGGAAGTTGTGTGCGTTACGCTCATGCATAACTTCCATGCCTAAGTCG 25512 |||| ||| ||||| ||| | || || ||||| ||||||||||||||||| | | || Sbjct 226 GCTAGGTCTAGAGGAAAGCTATGAGCATTACGTTCATGCATAACTTCCATATCAAGGTTC 167 Query 25513 GCACGGTTAAGAATGTCAGCCCAAGTTGGGACGACTCTTCCGTTGGAATCAACGACTGAC 25572 ||||||| | || | ||||||||||| | || | ||| | |||||| || || Sbjct 166 GCACGGTAATGA-TATCAGCCCAAGTATTAATTACACGTCCTTGACTATCAACCACGGAT 108 Query 25573 TGATTGAAGTTAAAGCCGTTGAGATTAAAAGCCATAGTGGAGACTCCCATAGCGGTAAGC 25632 || ||||| || || || || || || |||||||||||| | || | ||| || | | Sbjct 107 TGGTTGAAATTGAAACCATTTAGGTTGAAAGCCATAGTGCTAATACCTAAAGCAGTGAAC 48 Query 25633 CATATGCAAGTGACGGGCCAAGCAGCCAGGAAGAAATGTAA 25673 || || | || |||||||| || |||||||| ||||| Sbjct 47 CAGATACCTACTACAGGCCAAGCCGCTAGGAAGAAGTGTAA 7 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 151989446869876