Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nothapodytes_20nimmoniana_20[genbank_20GCA_5F002091855.1_202017-04- 03] 2,301 sequences; 1,365,272 total letters Query= NC_019443.1 Length=172879 Score E Sequences producing significant alignments: (Bits) Value seq544 158 1e-33 >seq544 Length=768 Score = 158 bits (174), Expect = 1e-33 Identities = 177/234 (76%), Gaps = 7/234 (3%) Strand=Plus/Plus Query 163255 CGTTCACTTCACTTCTTCCTTGCTGCATTCCCTGTGGTCTGCATCTGGTTCACTGCAATG 163314 ||||| | ||||||||||| || || | ||||| || | |||||||||||||| | Sbjct 1 CGTTCGTTACACTTCTTCCTAGCGGCTTGGCCTGTAGTAGGTATCTGGTTCACTGCTTTA 60 Query 163315 GGTGTGTCAACTATGGCATTCAACCTTAACGGTTTCAACTTCAACCAATCCGTCGTTGA- 163373 ||| | |||||||| |||||||| || |||||||| |||||||||||||| ||||| Sbjct 61 GGTATTAGCACTATGGCTTTCAACCTAAATGGTTTCAATTTCAACCAATCCGTGGTTGAT 120 Query 163374 --CGCAGGTGGTAAAGTGATTCCTACTTGGGCAGATATCCTTAACAGAGCAGGACTTGGT 163431 ||| || || ||| ||||||||| |||||| || || | || |||| | Sbjct 121 AGTCAAGGACGT---GTAATTAATACTTGGGCTGATATCATT-ACCGTGCGAACCTTGAT 176 Query 163432 ATGGAAGTTATGCACGAGCGTAATGCTCACAACTTCCCACTTGACCTTGCTGCT 163485 |||||||||||||| || ||||||||||| | ||| || || ||||| |||||| Sbjct 177 ATGGAAGTTATGCATGAACGTAATGCTCATAGCTTTCCTCTAGACCTAGCTGCT 230 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 553068891898440