Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nothapodytes_20nimmoniana_20[genbank_20GCA_5F002091855.1_202017-04- 03] 2,301 sequences; 1,365,272 total letters Query= NC_020855.1 Length=192497 Score E Sequences producing significant alignments: (Bits) Value seq476 197 2e-45 seq544 114 2e-20 >seq476 Length=815 Score = 197 bits (218), Expect = 2e-45 Identities = 305/434 (70%), Gaps = 1/434 (0%) Strand=Plus/Plus Query 8431 CCAAATGGATATACTAAGAACACTGCGAAAGCAGCAGATACTGGAGCACTATATGCTACA 8490 |||| ||| || | ||||| || || |||||| | || ||||| |||||| ||| Sbjct 1 CCAATTGGGTAGATCAAGAAAACAGCAGTAGCAGCTGCAACGGGAGCTGAATATGCAACA 60 Query 8491 CAGATCCATGGTCTCATACCTAAGCGGTATGATAACTCCCACTGTCTACCCATGTAAGCA 8550 ||||| |||| |||||||| ||| | | | |||||||| | |||||||||| | Sbjct 61 GCAATCCAAGGTCGCATACCTAGACGGAACTA-AGCTCCCACTCACGACCCATGTAACAA 119 Query 8551 GAAATTCCAATAAGGAAGTGGAAGATAACCAACTGATATGGACCTCCGTTATACAACCAC 8610 | | |||| | |||||| | | || | | ||| ||||| || || || ||||| Sbjct 120 GCTACACCAAGTAAGAAGTGTAGAACAATTAGTTCATAAGGACCACCATTGTATAACCAT 179 Query 8611 TCATCTAATGTGGCAGCTTCCCAAATGGGATAGAAGTGTAATCCAATAGCGTTGGAAGAT 8670 ||||| | | || |||||||| || || || ||||| || || ||||| |||| Sbjct 180 TCATCAACGGATGCCGCTTCCCATATTGGGTAAAAGTGCAAACCTATAGCTGCAGAAGTA 239 Query 8671 GGAACGACAGCACCAGAGATGATGTTGTTTCCATACATGAATGAACCTGCAACAGGTTCA 8730 |||| | ||||| || || |||||||||||||| | | || || | |||||||||| Sbjct 240 GGAATAATGGCACCTGAAATAATGTTGTTTCCATAAAGTAGAGATCCAGAAACAGGTTCA 299 Query 8731 CGAATACCGTCGATATCGACAGGTGGAGCAGCAATAAATGCCACGATAAAGCAAGTAGCA 8790 |||||||| || ||||| || || ||||||||||| || || | ||||| || || Sbjct 300 CGAATACCATCAATATCTACTGGAGGAGCAGCAATGAAGGCGATAATAAATACAGAAGTT 359 Query 8791 GCAGCTAACAAGCAAGGAATCATTAGAACTCCAAACCAACCGACATAAAGTCTGTTGTTT 8850 || | || ||| ||| ||||||| ||| |||||||| || | ||||| | ||| | Sbjct 360 GCGGTCAATAAGGTAGGGATCATTAAAACACCAAACCATCCAATGTAAAGACGGTTTTCA 419 Query 8851 GTACTTGTAACCCA 8864 || || || | ||| Sbjct 420 GTGCTAGTTATCCA 433 >seq544 Length=768 Score = 114 bits (126), Expect = 2e-20 Identities = 158/219 (72%), Gaps = 3/219 (1%) Strand=Plus/Minus Query 7891 GCTAAGTCTAATGGGAAGTTGTGTGCATTTCTTTCATGCATAACTTCCATACCTAAGTTT 7950 |||| ||||| || ||| | || ||||| | ||||||||||||||||||| | | ||| Sbjct 226 GCTAGGTCTAGAGGAAAGCTATGAGCATTACGTTCATGCATAACTTCCATATCAAGGTTC 167 Query 7951 GCTCTGTT-TAATACGTCACCCCATGTAGGAATGATTTTACCATTAACATCAACAACTGA 8009 || | || | ||| ||| |||| ||| ||| | || | | |||||| || || Sbjct 166 GCACGGTAATGATA--TCAGCCCAAGTATTAATTACACGTCCTTGACTATCAACCACGGA 109 Query 8010 TTGGTTAAAGTTAAATCCGTTAAGGTTAAATGCCATTGTGCAAATACCCATAGAAGTTAA 8069 |||||| || || || || || ||||| || ||||| |||| |||||| | || ||| || Sbjct 108 TTGGTTGAAATTGAAACCATTTAGGTTGAAAGCCATAGTGCTAATACCTAAAGCAGTGAA 49 Query 8070 CCAAACACATACAACTGGGAATGTAGCGAGGAAGAAGTG 8108 ||| | || ||| || || | | || ||||||||||| Sbjct 48 CCAGATACCTACTACAGGCCAAGCCGCTAGGAAGAAGTG 10 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 615844686257720