Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nothapodytes_20nimmoniana_20[genbank_20GCA_5F002091855.1_202017-04- 03] 2,301 sequences; 1,365,272 total letters Query= NC_020865.1 Length=45730 Score E Sequences producing significant alignments: (Bits) Value seq476 203 9e-48 seq544 123 7e-24 >seq476 Length=815 Score = 203 bits (224), Expect = 9e-48 Identities = 291/406 (72%), Gaps = 3/406 (1%) Strand=Plus/Minus Query 41255 ACTAATAACCGTCTTTATGTAGGATGGTTCGGAGTCCTTATGATTCCGTGCCTCCTTG-C 41313 ||| | ||||||||||| | |||||||| || || | ||||| || | ||| ||| | Sbjct 421 ACTGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTAATGATCCC-TACCTTATTGAC 363 Query 41314 CGCTACAACTTGTTTTATTATCGCCTTTGTTGGCGCACCACCTGTTGACATCGATGGAAT 41373 ||| || || |||||||||||||| ||| || || || || || || ||||| || Sbjct 362 CGCAACTTCTGTATTTATTATCGCCTTCATTGCTGCTCCTCCAGTAGATATTGATGGTAT 303 Query 41374 CCGAGAACCCGTCGCTGGCTCCCTGTTGTATGGTAACAACATCATATCAGGAGCCGTCGT 41433 || ||||| || |||| || || | ||||| |||||||| || ||||| ||| | | Sbjct 302 TCGTGAACCTGTTTCTGGATCTCTACTTTATGGAAACAACATTATTTCAGGTGCCATTAT 243 Query 41434 TCCGAGCAGTAATGCCATCGGACTACACTTCTACCCAATTTGGGAAGCTGCTACACTTGA 41493 ||| | | || || || | ||||| |||||||| |||||||| || | |||| Sbjct 242 TCCTACTTCTGCAGCTATAGGTTTGCACTTTTACCCAATATGGGAAGCGGCATCCGTTGA 183 Query 41494 TGAATGGCTGTACAACGGCGGTCCATTCCAACTCACCGTATTCCACTTCCTCATTGGCGT 41553 ||||||| | ||||| || ||||| | |||| | || | |||||| | |||| || Sbjct 182 TGAATGGTTATACAATGGTGGTCCTTATGAACTAATTGTTCTACACTTCTTACTTGGTGT 123 Query 41554 CTTTGCTTACATGGGACGAGAGTGGGAACTTAGCTATCGACTAGGGATGAGGCCCTGGAT 41613 | ||||||||| || |||||||| ||||| | || ||||| ||| | || ||||| Sbjct 122 AGCTTGTTACATGGGTCGTGAGTGGGAGCTTAG-TTCCGTCTAGGTATGCGACCTTGGAT 64 Query 41614 CTTTGTTGCGTACTCTGCTCCTGTCGCCGCTGCGACTGCTGTGTTC 41659 |||||| || || ||||| || || ||||| |||||||| ||| Sbjct 63 TGCTGTTGCATATTCAGCTCCCGTTGCAGCTGCTACTGCTGTTTTC 18 >seq544 Length=768 Score = 123 bits (136), Expect = 7e-24 Identities = 159/218 (73%), Gaps = 1/218 (0%) Strand=Plus/Plus Query 41999 CATTTCTTTCTTGCTGCCTGGCCTGTTGTAGGTATTTGGTTTGCTGCGCTTGGCGTGTCT 42058 || ||||| || || || |||||||| |||||||| ||||| |||| | || | Sbjct 10 CACTTCTTCCTAGCGGCTTGGCCTGTAGTAGGTATCTGGTTCACTGCTTTAGGTATTAGC 69 Query 42059 ACCATGGCTTTCAACTTGAATGGTTTCAACTTTAACCAATCTCTGCTAGCTGCTGATGGA 42118 || |||||||||||| | ||||||||||| || |||||||| || | | | | | ||| Sbjct 70 ACTATGGCTTTCAACCTAAATGGTTTCAATTTCAACCAATCCGTGGTTGATAGTCAAGGA 129 Query 42119 CAGGTGATCAACACCTGGGCTGACATTCTTAACCGTGCCAACCTTGGCTTTGAGGTGATG 42178 | || || || || |||||||| | || | ||||||| ||||||| | || || ||| Sbjct 130 CGTGTAATTAATACTTGGGCTGATA-TCATTACCGTGCGAACCTTGATATGGAAGTTATG 188 Query 42179 CATGAGCGGAACGCACACAACTTCCCGCTTGACCTTGC 42216 ||||| || || || || | ||| || || ||||| || Sbjct 189 CATGAACGTAATGCTCATAGCTTTCCTCTAGACCTAGC 226 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 146210404782904