Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nothapodytes_20nimmoniana_20[genbank_20GCA_5F002091855.1_202017-04- 03] 2,301 sequences; 1,365,272 total letters Query= NC_020874.1 Length=46198 Score E Sequences producing significant alignments: (Bits) Value seq544 134 4e-27 >seq544 Length=768 Score = 134 bits (148), Expect = 4e-27 Identities = 168/228 (74%), Gaps = 3/228 (1%) Strand=Plus/Minus Query 25877 GCTAAGTCAAGTGGAAAGTTATGAGCATTACGCTCGTGCATAACTTCAAAGCCGAGGTTA 25936 |||| ||| || |||||| ||||||||||||| || ||||||||||| | | ||||| Sbjct 226 GCTAGGTCTAGAGGAAAGCTATGAGCATTACGTTCATGCATAACTTCCATATCAAGGTTC 167 Query 25937 GCTCGGTTTAAT-ACATCAGCCCATGTAGGTATTATCTTTCCATTAACATCTACTACTGA 25995 || |||| ||| | ||||||||| ||| |||| ||| | | ||| || || || Sbjct 166 GCACGGT--AATGATATCAGCCCAAGTATTAATTACACGTCCTTGACTATCAACCACGGA 109 Query 25996 CTGGTTAAAGTTAAAACCATTTAGGTTAAATGCCATTGTGCAGATACCCATAGATGTCAG 26055 ||||| || || |||||||||||||| || ||||| |||| ||||| | || || | Sbjct 108 TTGGTTGAAATTGAAACCATTTAGGTTGAAAGCCATAGTGCTAATACCTAAAGCAGTGAA 49 Query 26056 CCATATGCCAACAACCGGCCAAGTAGCAAGAAAGAAATGAAGAGAACG 26103 ||| || || || || ||||||| || || ||||| || | ||||| Sbjct 48 CCAGATACCTACTACAGGCCAAGCCGCTAGGAAGAAGTGTAACGAACG 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 147707963861920