Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nothapodytes_20nimmoniana_20[genbank_20GCA_5F002091855.1_202017-04- 03] 2,301 sequences; 1,365,272 total letters Query= NC_021559.1 Length=179063 Score E Sequences producing significant alignments: (Bits) Value seq7 291 9e-74 seq476 188 8e-43 seq544 122 1e-22 >seq7 Length=7073 Score = 291 bits (322), Expect = 9e-74 Identities = 595/882 (67%), Gaps = 29/882 (3%) Strand=Plus/Minus Query 73364 TTTGACGTTCTTGATGATTGGTTAAAGAGAGATCGTTTCGTATTCATCGGATGGTCTGGT 73423 ||||| || | ||||| |||||| ||| || |||||||| || | || ||||| || Sbjct 857 TTTGATATTATGGATGACTGGTTACGGAGGGACCGTTTCGTTTTTGTAGGCTGGTCCGGC 798 Query 73424 CTTTTACTTTTACCTTGTGCTTACCTAGCAATCGGAGGTTGGTTCGTAGGAACTACTTTC 73483 || || || || |||||||| || | || | || ||||||||| ||| || || || Sbjct 797 CTATTGCTCTTTCCTTGTGCCTATTTCGCTTTAGGGGGTTGGTTCACAGGTACAACCTTT 738 Query 73484 GTGACCTCATGGTACACACATGGTATTGCATCCTCATATCTTGAGGGAGCAAATTTTTTA 73543 || || || ||||| || ||||| | || || ||| | || || ||||| ||| Sbjct 737 GTAACTTCGTGGTATACCCATGGATTGGCTAGTTCCTATTTGGAAGGCTGCAATTTCTTA 678 Query 73544 ACTGCAGCAGTATCAACACCTGGTGATGCTATGGGTCATAGTCTATTGTTCCTTTGGGGA 73603 ||||| ||||| || || |||| | || | | | ||| | ||||| | || ||||| Sbjct 677 ACTGCCGCAGTTTCTACTCCTGCTAATAGTTTAGCGCATTCTTTATTGCTACTATGGGGT 618 Query 73604 CCAGAGGCACAAGGAGATCTTGTACGATGGTTTCAATTAGGTGGACTATGGAACTTTGTA 73663 || || ||||| |||||| || || |||| |||||||||||| ||||||| ||||| Sbjct 617 CCTGAAGCACAGGGAGATTTTACTCGTTGGTGTCAATTAGGTGGTCTATGGACTTTTGTT 558 Query 73664 GCATTACATGGAGTCTTTGGACTCATAGGTTTCATGCTTAGACAGTTTGAGATTGCAGGA 73723 || || ||||| | || ||||| |||||||||||||| | || || || |||| || Sbjct 557 GCTTTCCATGGCGCTTTCGGACTAATAGGTTTCATGCTACGTCAATTCGAACTTGCTCGA 498 Query 73724 CTTGTTGGGATACGTCCTTACAACGCATTAGCTTTTTCAGCAGTTATCGCAGTATTCACG 73783 |||| | || ||||| || ||| | || || || || || || || || Sbjct 497 TCTGTTCAATTGCGACCTTATAATGCAATCGCATTCTCTGCTCCAATTGCTGTTTTTGTT 438 Query 73784 AGCATCTTTCTAATATATCCTTTAGGACAGCATAGTTGGTTCTTCGCACCTTCATTCGGT 73843 | || || || ||||| |||| ||| | |||||||||| || ||| || || Sbjct 437 TCTGTATTCCTGATTTATCCACTAGGTCAGTCTGGTTGGTTCTTTGCGCCTAGTTTTGGC 378 Query 73844 GTCGCAGCAATCTTTCGTTATAT----TTTATTCATACAGGGTTTCCACAATATAACTCT 73899 || ||||| || ||||| | || ||| |||| ||||||| || ||| || | Sbjct 377 GTAGCAGCTATATTTCGATTCATCCTCTTTTTTCA---AGGGTTT-CATAATTGGACGTT 322 Query 73900 TAATCCATTTCATATGATGGGTGTAGCAGGTATACTTGGTGGAGCATTACTATGTGCCAT 73959 || ||||||||||||||||| || || ||| || | || | || || ||||| || || Sbjct 321 GAACCCATTTCATATGATGGGAGTTGCCGGTGTATTGGGCGCTGCTTTGCTATGCGCTAT 262 Query 73960 ACATGGTGCAACAGTACAGAACACATTGTATGAAGACACATCACAATACACTGAAGGTAA 74019 |||||||| || ||| | || || || | |||||| || | | Sbjct 261 TCATGGTGCTACCGTAGAAAATACTTTATTTGAAGA---------------TG--GTGAT 219 Query 74020 GATTCAATCTACAACTTTCAGAGCATTCGATCCTACACAGGAAGAAGAGACTTATAGTAT 74079 | | ||| |||| ||| | || || | || || || | ||||| |||||| || Sbjct 218 GGTGCAA-ATACA---TTCCGTGCTTTTAACCCAACTCAAGCGGAAGAAACTTATTCAAT 163 Query 74080 GATTACTGCTAACAGATTCTGGTCACAGATATTTGGTATAGCATTTTCAAACAAAAGATT 74139 | | || |||||| | || ||||| || || ||||| | || ||||| || ||| | | Sbjct 162 GGTCACCGCTAACCGCTTTTGGTCCCAAATTTTTGGGGTTGCTTTTTCCAATAAACGTTG 103 Query 74140 CTTACACTTCCTTATGTTGTTCGTACCTGTCATGGGTATGTGGACATCATCTATAGGTAT 74199 ||||| ||| ||||||| || ||||| || | ||| | |||| || | || | Sbjct 102 GTTACATTTCTTTATGTTATTTGTACCAGTAACCGGTTTATGGATGAGTGCTCTTGGAGT 43 Query 74200 CGTAGGTCTAGCACTTAACCTTAGAGCATACGACTTTGTATC 74241 || ||||| || || ||||| | || || |||||||| || Sbjct 42 AGTCGGTCTGGCTCTGAACCTACGCGCCTATGACTTTGTTTC 1 >seq476 Length=815 Score = 188 bits (208), Expect = 8e-43 Identities = 293/414 (71%), Gaps = 6/414 (1%) Strand=Plus/Minus Query 72235 TTTTGTGAGTGGGTAACATCCACTGACAATCGCATCTACGTTGGTTGGTTTGGTGTCTTA 72294 || ||| | ||| |||| |||||| || || | ||| |||| ||||||||||| ||| Sbjct 442 TTCTGTAACTGGATAACTAGCACTGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTA 383 Query 72295 ATGATCCCATGTCTTCTA-ACTGCTGCTGCTTGTTTCATTGTAGCATTCATCGCTGCTCC 72353 |||||||| | ||| | || || || || || ||| | || ||||| |||||||| Sbjct 382 ATGATCCC-TACCTTATTGACCGCAACTTCTGTATTTATTATCGCCTTCATTGCTGCTCC 324 Query 72354 TCCAGTCGATATCGACGGAATCAGAGAACCAGTTGCGGGTTCTTTCTTATATGGTAACAA 72413 |||||| ||||| || || || | ||||| ||| | || ||| | | ||||| ||||| Sbjct 323 TCCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTCTACTTTATGGAAACAA 264 Query 72414 CATCATCTCTGGTGCTGTAGTTCCATCTTCAAACGCAATAGGATTACACTTCTATCCCAT 72473 ||| || || ||||| | |||| |||| || ||||| || ||||| || || || Sbjct 263 CATTATTTCAGGTGCCATTATTCCTACTTCTGCAGCTATAGGTTTGCACTTTTACCCAAT 204 Query 72474 CTGGGAAGCAGCCACTATGGACGAGTGGTTGTATAACGGAGGTCCTTACCAGTTAGTTAT 72533 |||||||| || | | || || ||||| || || || |||||||| | || || | Sbjct 203 ATGGGAAGCGGCATCCGTTGATGAATGGTTATACAATGGTGGTCCTTATGAACTAATTGT 144 Query 72534 TTTCCACTTCCTTATTGGAATCTCTGCCTACATGGGTAGACAGTGGGAACTATCATACAG 72593 | | |||||| | |||| | || ||||||||| | ||||||| || | | | | Sbjct 143 TCTACACTTCTTACTTGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAGCT-TAGTTCCG 85 Query 72594 ACTAGGAATGAGACCTTGGATATGTGTAGCATACTCAGCACCTGTATCTGCAGC 72647 ||||| ||| |||||||||| ||| ||||| ||||| || || |||||| Sbjct 84 TCTAGGTATGCGACCTTGGATTGCTGTTGCATATTCAGCTCCCGT---TGCAGC 34 >seq544 Length=768 Score = 122 bits (134), Expect = 1e-22 Identities = 164/227 (72%), Gaps = 1/227 (0%) Strand=Plus/Plus Query 72991 CGTTCATTACACTTCTTCCTCGCTGTATTCCCTGTAGTCTGTGTATGGTTAACCTCAATG 73050 ||||| |||||||||||||| || | | |||||||| || | ||||| || | | Sbjct 1 CGTTCGTTACACTTCTTCCTAGCGGCTTGGCCTGTAGTAGGTATCTGGTTCACTGCTTTA 60 Query 73051 GGTATCTGTACAATGGCATTCAACCTTAACGGATTCAACTTCAACCAATCAGTTGTAGAT 73110 ||||| | || ||||| |||||||| || || ||||| ||||||||||| || || ||| Sbjct 61 GGTATTAGCACTATGGCTTTCAACCTAAATGGTTTCAATTTCAACCAATCCGTGGTTGAT 120 Query 73111 GCAAACGGAAAGATTGTACCAACATGGGGAGATGTTCTTAACAGAGCAAACCTTGGAATG 73170 | ||| | | || |||| ||| || | || | || ||||||| ||| Sbjct 121 AGTCAAGGACGTGTAATTAATACTTGGGCTGAT-ATCATTACCGTGCGAACCTTGATATG 179 Query 73171 GAAGTTATGCATGAAAGAAATGCACACAACTTCCCACTAGACCTAGC 73217 ||||||||||||||| | ||||| || | ||| || ||||||||||| Sbjct 180 GAAGTTATGCATGAACGTAATGCTCATAGCTTTCCTCTAGACCTAGC 226 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 572857122723080