Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nothapodytes_20nimmoniana_20[genbank_20GCA_5F002091855.1_202017-04- 03] 2,301 sequences; 1,365,272 total letters Query= NC_026926.1 Length=192108 Score E Sequences producing significant alignments: (Bits) Value seq7 401 8e-107 seq544 127 3e-24 >seq7 Length=7073 Score = 401 bits (444), Expect = 8e-107 Identities = 601/847 (71%), Gaps = 6/847 (1%) Strand=Plus/Minus Query 182371 TGGACGACTGGGTTAAACGGGATCGCTTTGTCTTTGTGGGTTGGTCTGGACTCCTACTTC 182430 |||| |||||| | |||| || || || ||||| || ||||| || || | || Sbjct 847 TGGATGACTGGTTACGGAGGGACCGTTTCGTTTTTGTAGGCTGGTCCGGCCTATTGCTCT 788 Query 182431 TTCCCACTGCTTATCTTGCCATTGGCGGTTGGCTTACTGGGACAGCTTTTGTTACGAGTT 182490 |||| ||| ||| | || | || |||||| | || || ||| | ||||| || | Sbjct 787 TTCCTTGTGCCTATTTCGCTTTAGGGGGTTGGTTCACAGGTACAACCTTTGTAACTTCGT 728 Query 182491 GGTACACCCACGGTCTTGCTTCTTCCTATCTTGAAGG-TGCTAACTTTCTTA-CGGCAGC 182548 |||| ||||| || | ||| ||||||| | ||||| ||| | ||||||| | || || Sbjct 727 GGTATACCCATGGATTGGCTAGTTCCTATTTGGAAGGCTGCAA--TTTCTTAACTGCCGC 670 Query 182549 TGTCTCGACGCCTGCTGATGCTATGGGTCATTCTCTTCTTCTACTTTGGGGTCCTGAGTC 182608 || || || |||||| || | | | |||||| | | ||||| ||||||||||| | Sbjct 669 AGTTTCTACTCCTGCTAATAGTTTAGCGCATTCTTTATTGCTACTATGGGGTCCTGAAGC 610 Query 182609 TCAGGGGAATTTCCAGCGGTGGTGCCAACTTGGGGGACTCTGGAATTTCGTGGCTCTCCA 182668 ||||| |||| || ||||| ||| | || || || |||| ||| || ||| |||| Sbjct 609 ACAGGGAGATTTTACTCGTTGGTGTCAATTAGGTGGTCTATGGACTTTTGTTGCTTTCCA 550 Query 182669 CGGTGCCTTCGCTCTCATTGGTTTCATGCTTAGGCAATTTGAACTTGCTCGC-CTGATTG 182727 || || |||| || || ||||||||||| | ||||| ||||||||||| ||| || Sbjct 549 TGGCGCTTTCGGACTAATAGGTTTCATGCTACGTCAATTCGAACTTGCTCGATCTG-TTC 491 Query 182728 GAATCAGACCTTACAATGCGATTGCTTTTTCTGGTCCTATTGCTGTATTCGTCAGTGTGT 182787 | | ||||||| ||||| || || || |||| ||| |||||||| || || ||| | Sbjct 490 AATTGCGACCTTATAATGCAATCGCATTCTCTGCTCCAATTGCTGTTTTTGTTTCTGTAT 431 Query 182788 TCCTCATCTATCCTTTGGGACAGTCCTCTTGGTTTTTCGCGCCGTCCTTTGGTGTCGCGG 182847 |||| || ||||| | || ||||| |||||| || ||||| ||||| || || | Sbjct 430 TCCTGATTTATCCACTAGGTCAGTCTGGTTGGTTCTTTGCGCCTAGTTTTGGCGTAGCAG 371 Query 182848 CGATCTTCAGGTTCCTGTTGTTCCTTCAGGGTTTCCACAACTGGACACTCAACCCCTTCC 182907 | || || | ||| | | || |||| || || || || ||||| | ||||| || | Sbjct 370 CTATATTTCGATTCATCCTCTTTTTTCAAGGGTTTCATAATTGGACGTTGAACCCATTTC 311 Query 182908 ATATGATGGGAGTTGCTGGTATACTGGGTGGAGCACTGCTCAGTGCTATCCATGGTGTCA 182967 |||||||||||||||| ||| || |||| | || |||| | ||||| ||||||| | Sbjct 310 ATATGATGGGAGTTGCCGGTGTATTGGGCGCTGCTTTGCTATGCGCTATTCATGGTGCTA 251 Query 182968 CAGTAGAGAATACCTTGTATGAAGATGGAGAACAGGCAAACACATTTAAAGCGTTCGATT 183027 | ||||| ||||| || | ||||||||| || ||||| ||||| || || | Sbjct 250 CCGTAGAAAATACTTTATTTGAAGATGGTGATGGTGCAAATACATTCCGTGCTTTTAACC 191 Query 183028 CCACTCAGGAGGAGGAGACCTATTCGATGGTTACAGCGAATCGTTTTTGGTCACAAATCT 183087 | ||||| | ||| || || ||||| ||||| || || || || |||||||| ||||| | Sbjct 190 CAACTCAAGCGGAAGAAACTTATTCAATGGTCACCGCTAACCGCTTTTGGTCCCAAATTT 131 Query 183088 TCGGGGTTGCGTTTAGCAATAAGCGTTGGTTGCACTTCTTTATGTTGTTTGTTCCTGTCA 183147 | |||||||| ||| |||||| |||||||| || ||||||||||| ||||| || || | Sbjct 130 TTGGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGTACCAGTAA 71 Query 183148 TGGGTCTTTGGGTCTCTTCTATTGGGATCATTGGGCTTGCTCTTAATCTTCGTGCTTATG 183207 ||| | ||| | | || |||| | | || || ||||| || || || || |||| Sbjct 70 CCGGTTTATGGATGAGTGCTCTTGGAGTAGTCGGTCTGGCTCTGAACCTACGCGCCTATG 11 Query 183208 ATTTTGT 183214 | ||||| Sbjct 10 ACTTTGT 4 >seq544 Length=768 Score = 127 bits (140), Expect = 3e-24 Identities = 167/230 (73%), Gaps = 1/230 (0%) Strand=Plus/Plus Query 181737 CGTTCACTGCACTTCTTCCTCGCAGCATGGCCTGTAGTTGGAATCTGGTTCACCGCACTG 181796 ||||| | ||||||||||| || || ||||||||||| || ||||||||||| || | Sbjct 1 CGTTCGTTACACTTCTTCCTAGCGGCTTGGCCTGTAGTAGGTATCTGGTTCACTGCTTTA 60 Query 181797 GGCGTAAGCACCATGGCATTTAACCTCAATGGATTCAACTTCAACCAGTCTATCCTCGAC 181856 || | ||||| ||||| || ||||| ||||| ||||| |||||||| || | | || Sbjct 61 GGTATTAGCACTATGGCTTTCAACCTAAATGGTTTCAATTTCAACCAATCCGTGGTTGAT 120 Query 181857 GGACAAGGACGTGTCCTCAACACCTGGGCAGACGTGCTCAACCGTGCCGGTCTCGGCATG 181916 | ||||||||||| | || || ||||| || | | ||||||| || | ||| Sbjct 121 AGTCAAGGACGTGTAATTAATACTTGGGCTGATAT-CATTACCGTGCGAACCTTGATATG 179 Query 181917 GAAGTCATGCACGAGCGCAACGCGCACAACTTCCCGCTTGATCTTGCAGC 181966 ||||| ||||| || || || || || | ||| || || || || || || Sbjct 180 GAAGTTATGCATGAACGTAATGCTCATAGCTTTCCTCTAGACCTAGCTGC 229 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 614599922061280