Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ocimum_20tenuiflorum_20[genbank_20GCA_5F001278415.1_202015-09-02] 121,993 sequences; 332,616,730 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq81039 82.4 5e-11 >seq81039 Length=11581 Score = 82.4 bits (90), Expect = 5e-11 Identities = 101/138 (73%), Gaps = 0/138 (0%) Strand=Plus/Minus Query 97119 GACATGGGCGATCATACAAGTTAATAGAGAATAGCTAGCAATGTTAAAAGGCACCCCTAG 97178 |||||| || ||||| || |||| |||| ||| || |||||||| ||||| || || Sbjct 3603 GACATGTGCAATCATGCATGTTAGCAGAGCATAAGATGCGATGTTAAATGGCACACCAAG 3544 Query 97179 TCCCATATCAGCTGATCTTTGATATAACTGACAGGAAAGCTTTCCATCACACACATAAAA 97238 ||||||||||| || | |||||| | ||| || || |||| |||| || ||||| Sbjct 3543 ACCCATATCAGCAGAACGTTGATACATCTGGCAAGATAGCTCACCATTTGCTACGTAAAA 3484 Query 97239 CTGACTCAATACATGACA 97256 ||| |||| | ||| || Sbjct 3483 CTGCATCAAAATATGTCA 3466 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346268405125010