Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ocimum_20tenuiflorum_20[genbank_20GCA_5F001278415.1_202015-09-02] 121,993 sequences; 332,616,730 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq81039 98.7 8e-16 >seq81039 Length=11581 Score = 98.7 bits (108), Expect = 8e-16 Identities = 95/122 (78%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 20431 CAATTTTACGTTGCTAATAATGAATTGTCGTGTCAAATGTATCAACGATCCGCTGATATG 20490 || |||||||| || ||| ||| | || || || ||||||||||| || ||||||||| Sbjct 3481 CAGTTTTACGTAGCAAATGGTGAGCTATCTTGCCAGATGTATCAACGTTCTGCTGATATG 3540 Query 20491 GGACTGGGTGTTCCTTTCAATATTGCAAGTTATGCGCTGCTTACGTATATGATTGCACAT 20550 || || ||||| || || || || ||| |||||| ||||| || | |||||||||||| Sbjct 3541 GGTCTTGGTGTGCCATTTAACATCGCATCTTATGCTCTGCTAACATGCATGATTGCACAT 3600 Query 20551 GT 20552 || Sbjct 3601 GT 3602 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 398590497345385