Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ocimum_20tenuiflorum_20[genbank_20GCA_5F001278415.1_202015-09-02] 121,993 sequences; 332,616,730 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq21024 91.5 3e-13 >seq21024 Length=7623 Score = 91.5 bits (100), Expect = 3e-13 Identities = 103/138 (75%), Gaps = 0/138 (0%) Strand=Plus/Plus Query 248805 CAAAGATTTGGAGTACGATTTCTTTGCTTTCAAAACGCTGGAGAAATCGTATCTCCTCAA 248864 || ||| || || || ||||| |||| ||| ||||| || || | || ||||| | || Sbjct 2579 CAGAGACTTTGACTATGATTTTTTTGGTTTTAAAACTCTTGAAAGGTCCTATCTGTTAAA 2638 Query 248865 AATTGATGGCAAGATCGTGGAACGAATTCAGCACATGTTGATGCGAGTGGCTGTCGGGAT 248924 || | |||||| | || ||| || ||||||||||||||||| || ||||| || || Sbjct 2639 GATCAAAGGCAAGGTTGTAGAAAGACCACAGCACATGTTGATGCGTGTTGCTGTTGGAAT 2698 Query 248925 TCACAAGGATGACATAGA 248942 ||||||||||| || || Sbjct 2699 CCACAAGGATGATATTGA 2716 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1072088065199424