Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ocimum_20tenuiflorum_20[genbank_20GCA_5F001278415.1_202015-09-02] 121,993 sequences; 332,616,730 total letters Query= NC_003389.1 Length=146454 Score E Sequences producing significant alignments: (Bits) Value seq21024 89.7 5e-13 >seq21024 Length=7623 Score = 89.7 bits (98), Expect = 5e-13 Identities = 111/152 (73%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 38400 TTGAGGCAATGGAGTTCCGGCGTTAAATAATGTAGGAGATGCATGTATGAACCATTTTTC 38459 ||| ||| ||| ||||| || ||||| | |||||||| |||||| |||||||| | Sbjct 2807 TTGTGGCCTTGGTGTTCCAGCATTAAAAAGAGTAGGAGAAGCATGTGTGAACCATCGCTG 2748 Query 38460 CGACAAATAATTATATGTTTCTATTACATCATCTATATCACCGCCGTGAATACCTAGAGA 38519 |||||| || |||||||| ||| || ||| |||||| | ||| || || | || Sbjct 2747 TGACAAAAGATGATATGTTTGTATCGCAGAATCAATATCATCCTTGTGGATTCCAACAGC 2688 Query 38520 TACCCTCATTAGCATATGTTGTGGTCTTTCTA 38551 || | ||| | ||| || ||||||||||||| Sbjct 2687 AACACGCATCAACATGTGCTGTGGTCTTTCTA 2656 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 467810340675920