Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ocimum_20tenuiflorum_20[genbank_20GCA_5F001278415.1_202015-09-02] 121,993 sequences; 332,616,730 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq103549 113 1e-19 >seq103549 Length=14649 Score = 113 bits (124), Expect = 1e-19 Identities = 158/219 (72%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 363622 ATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCC 363681 |||||||| ||| || ||||| || | ||| ||||||||| | |||||| ||||| Sbjct 7681 ATGAAGGATGATAGTATTGAGGGCATATATGATACACTTAAGGAATGTGCTGTTATTAGT 7740 Query 363682 AAGAATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGC-ACAGAACAGTTACAT 363740 || || || || |||||||| || |||| ||| ||||||| |||| | ||||| || Sbjct 7741 AAATCAGCTGGAGGGATTGGTGTGTCCGTCCATAATATTCGTGCTACAGGA-AGTTATAT 7799 Query 363741 TCGCGGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATAC 363800 || || ||| |||| || ||||| | ||||| |||||||| || || | | || Sbjct 7800 ACGTGGAACAAATGGATTGTCAAATGGCGTTGTTCCAATGCTTCGAGTTTTCAATGACAC 7859 Query 363801 TGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGG 363839 ||| | || || ||||||||||| || || | ||||| Sbjct 7860 TGCTCGATATGTTGACCAGGGTGGGGGCAAAAGGAAAGG 7898 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1301316412298526