Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ocimum_20tenuiflorum_20[genbank_20GCA_5F001278415.1_202015-09-02] 121,993 sequences; 332,616,730 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq3958 262 3e-64 seq69050 259 4e-63 seq73611 154 1e-31 seq1929 127 2e-23 seq41514 120 2e-21 seq121499 107 1e-17 seq54199 104 2e-16 seq75701 95.1 9e-14 seq105507 93.3 3e-13 seq34248 86.0 5e-11 >seq3958 Length=7975 Score = 262 bits (290), Expect = 3e-64 Identities = 843/1293 (65%), Gaps = 24/1293 (2%) Strand=Plus/Minus Query 517259 GCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACC 517318 |||| ||||| | ||||||||||| || | ||||| || ||| ||||| || Sbjct 4563 GCAGAAACATTCAATATACCATTGGCGTCGATGTCAAAGCACACCGTAATCTGAGGAACT 4504 Query 517319 CCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTA 517378 || || |||||||||| || || | | ||| |||| || || || || | Sbjct 4503 CCCCTAGGAGCAGGTGGAATGCCAGAGAGCTCAAACTTTCCGAGCAAGTTGTTGTCCCTT 4444 Query 517379 GTGAATTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAA 517438 || | ||| ||||||||| ||| || || || ||| || || || |||||| Sbjct 4443 GTCCTTGTTCTTTCACCCTCATAAACCTGAATCAACACGCCAGGCTGGTTGTCCGAATAA 4384 Query 517439 GTTGTAAATACTCTGGATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTC 517498 || | || ||| || || |||||| |||||||| ||| || | ||| Sbjct 4383 GTCGAGAAGACTTGCTCCTTCTTGGTAGGAATGGTTGTGTTCCTAGGGATCAACACAGTC 4324 Query 517499 ATAATACCACCTGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATA 517558 || | |||||||| ||||| ||||| ||||| || ||||||||||||| || | | | Sbjct 4323 ATGACCCCACCTGCAGTTTCCAAACCCAGAGAGAGCGGAGTGACATCAAGAAGCAACAAA 4264 Query 517559 TTTTGAAGTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATAT 517618 | || | || || | | | |||| | ||| || ||||||| || |||||||| Sbjct 4263 TCCTGGACCTTCTCGTTACCCTCACCACTCAAAATGGCAGCTTGAACGGCTGCACCATAA 4204 Query 517619 GCAACAGCTTCATCAGGATTAA--CAGTTTCATTTAGTTTTTTACCATTGAAAAAATT-T 517675 |||||||| ||||| || || | | || || || | || || ||||| || | | Sbjct 4203 GCAACAGCCTCATCTGGGTTGATGCTCTTGCAC--AGCTCCTTCCCGTTGAAGAAGTCCT 4146 Query 517676 GAAAGAAGTTGTCTTACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGC 517735 | || || | | || || ||||| | | || || ||||| | |||| || || Sbjct 4145 GCAACAACTGCTGA-ACTTTGGGAATTCTGGTGGAACCACCAACAAGGACAACATCGTGG 4087 Query 517736 ACCTGTGAT-TTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCCGC 517794 || | | | || |||| || | |||| || || ||||| || || | || | Sbjct 4086 ACA-GAGCTCTTGTCCATCTTGGCATCCCTCAAGCACTTCTCAACAGGCTCCATACACTT 4028 Query 517795 TCTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATTATAATC 517854 || |||||||| || || || ||| |||| | ||| | | | | | | |||| Sbjct 4027 CCTGAACAAGTCCATGTTGAGCTCCTCAAATCTAGCACGAGTGATGGGGGCGTAAAAATC 3968 Query 517855 AATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACG 517914 ||| || || ||| |||||||| ||||| || || || | | ||||| |||| | Sbjct 3967 AATACCCTCATACAGAGAATCAATCTCAATTGTGGTCTGGGCAGTGGAAGAGAGTGTTCT 3908 Query 517915 TTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGATTGATTCAAATC 517974 || || | ||||| |||||||| | |||| | ||| | | | ||| | ||| Sbjct 3907 CTTCGCCCTCTCACAAGCTGTCCTCAACCTTCTCAGGGCCCTGG--GGTTGCCGCTAATG 3850 Query 517975 TGTTTTATAT--TTTCTCTTGAAATCTTCAACACACCATGTTACAAGACGATTATCAAAA 518032 | ||| | | || ||||| || || | |||| | | || | | || |||||| Sbjct 3849 TCTTTCTTGTGCTTCCTCTTAAATTCCTGAACAAAGTGGTTGACCATTCTGTTGTCAAAA 3790 Query 518033 TCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCA 518092 |||||||| || | | ||| | |||| || || | |||| || | || || ||| Sbjct 3789 TCTTCACCACCAAGGTGAGTGTCACCTGCTGTTGCCTTCACTTCAAAGATACCCTCCTCA 3730 Query 518093 AGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATT 518152 | | | || | |||||| ||| ||||| || | ||||||||| || || ||| | Sbjct 3729 ATCGTGAGCAGGGAGACATCAAAGGTACCACCTCCAAGATCAAAAATTAGAACGTTCTTC 3670 Query 518153 TCTTTGTC-----TTGGTTT-TTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCA 518206 ||| | | ||| ||| || || |||||||| |||| ||||||||||| || ||| Sbjct 3669 TCTCCGACACTGGTTGCTTTCTTGTCTAGACCATAAGCAATTGCAGCAGCAGTGGGCTCA 3610 Query 518207 TTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTT 518266 || || |||| || ||||| ||||||||||| || ||||| || |||||||| | Sbjct 3609 TTGATGATTCGCATCACATTGAGACCAGCAATCACACCAGCATCCTTGGTGGCTTGACGC 3550 Query 518267 TGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCAGTTACTTCTTTACCAATA 518326 || ||||| || ||||| || |||||||||| ||| |||| | ||| | ||||| Sbjct 3549 TGAGAATCATTGAAATAAGCTGGAACAGTAACAACAGCATTCTTAACTGCAGAACCAAGG 3490 Query 518327 TAAGCGCTTGCCGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGGGAA 518386 || || ||| ||| |||| || | |||| ||||||||| || | ||| | | | Sbjct 3489 TATGCCTCTGCGATTTCCCTCATCTTCATCAAAACCATTGATGAGATCTCTTCAGCTGCA 3430 Query 518387 TATTGCTTGGATTCA-TTTTGATATGATACTTCAAAATATGGTTTATTACCA---ACATT 518442 ||||||| |||| ||| || | || ||| ||||| | |||| || Sbjct 3429 AATTGCTTCTCTTCACCCTTGTAATTA-ACAACAATCATGGGTTTGTCACCAGGTCCAGC 3371 Query 518443 AATAACTTTAAATGGCCAGTATTTCATATCTGATTGAACACTTTGGTCATTAAAATCTCT 518502 |||||| || |||||||| |||| ||||| |||||| | ||| | ||| || Sbjct 3370 AATAACCTTGAATGGCCACAATTTAATATCACTTTGAACCGATGCATCAGTGAAACGCCT 3311 Query 518503 ACCAATTAATCGTTTTGCATCAAAAATAGTATT 518535 ||||| || | || ||||| ||||| |||| Sbjct 3310 TCCAATCAACCTCTTAGCATCTGAAATA-TATT 3279 >seq69050 Length=7133 Score = 259 bits (286), Expect = 4e-63 Identities = 560/825 (68%), Gaps = 22/825 (3%) Strand=Plus/Plus Query 517496 GTCATAATACCACCTGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACA 517555 ||||| | |||||||||||| || | |||||| || |||||||| ||||| | || | Sbjct 2164 GTCATCACACCACCTGCTGTCTCCAGACCAAGGGAGAGAGGAGTAACATCTAGAAGCAAG 2223 Query 517556 ATATTTTGAAGTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCA 517615 | || || | ||| |||| | | |||| | ||| |||||||| | ||||||||| Sbjct 2224 AGATCCTGGACTTTCTCATTACCCTCACCACTCAAAATGGCTGCTTGGACTGCAGCACCA 2283 Query 517616 TATGCAACAGCTTCATCAGGATTAA--CAGTTTCATTTAGTTTTTTACCATTGAAAAAAT 517673 ||||||||||| |||||||| |||| | || || || | ||| || ||||| |||| Sbjct 2284 TATGCAACAGCCTCATCAGGGTTAATGCTCTTGCAG--AGCTCTTTCCCGTTGAAGAAAT 2341 Query 517674 -TTGAAAGAAGTTGTCTTACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCA 517732 ||| || ||| || ||||| ||||| | | || || ||||| | |||| ||| Sbjct 2342 CTTGTAA-AAGCTGCTGCACCTTTGGAATTCTGGTGGAACCACCAACAAGGACAACATCA 2400 Query 517733 TGCACCTGTGAT-TTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACC 517791 || | ||| | || |||| || | |||| ||| || ||||| ||||| | | Sbjct 2401 TGGATG-GTGCTCTTGTCCATCTTGGCATCCCTCAAACACTTCTCAACTGGTTCCATGCA 2459 Query 517792 CGCTCTAAACAAGTC--TGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATTA 517849 | || |||||||| || ||| || || ||| |||| | ||| | ||| | Sbjct 2460 CTTCCTGAACAAGTCCATGTTCAAC--TCCTCAAATCTAGCACGAGTGATGGTGGAGTAG 2517 Query 517850 TAATCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGT 517909 |||||| || || | | ||| |||| ||||| || ||||||| | ||| || ||| Sbjct 2518 AAATCAACACCCTCATAGAGAGAGTCAATCTCAATGGTGGTTTGAGCAGTAGATGAGAGT 2577 Query 517910 GCACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGATTGATTC 517969 | | || || | ||||| || ||||| | | | ||| || | || | ||| Sbjct 2578 GTCCTCTTTGCTCTCTCACAAGCAGTCCTCAACCGCCTTAAAGCCCTAGCATTTCCATTG 2637 Query 517970 AAATCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATGTTACAAGA--CGATTAT 518027 | ||| | || | || ||||| || || | |||| | ||| | || | | || | Sbjct 2638 ATGTCTTTCTTGTGCTTCCTCTTAAACTCCTGAACAAA--ATGGTTCACCATTCTGTTGT 2695 Query 518028 CAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCAT 518087 |||||||||||||||| | | ||| | || | || || | || | || | || | Sbjct 2696 CAAAATCTTCACCTCCAAGGTGAGTGTCACCAGCAGTGGCCTTCACCTCAAAGATCCCTT 2755 Query 518088 CTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTACAT 518147 | |||| | || ||||| |||||| ||| |||||||| | ||||||||| || |||| Sbjct 2756 CCTCAATGGTCAGAAGAGAAACATCAAAGGTGCCACCACCAAGATCAAAAATCAGGACAT 2815 Query 518148 TCATTTCTTTGTCT-TGGT-----TTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTG 518201 || |||| | |||| | || ||||||||||| |||| ||| |||||||| | Sbjct 2816 TCTTTTCACCAACACTGGTAGCCTTCTTGTCAAGACCATAAGCAATAGCCGCAGCAGTCG 2875 Query 518202 GTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTT 518261 | ||||| || || | || ||||||||||||||||| || ||||| || || |||| Sbjct 2876 GCTCATTGATGATACGCATTACATTAAGACCAGCAATGACACCAGCATCCTTGGTAGCTT 2935 Query 518262 GTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCAT 518306 | | ||| ||||| || || ||||| || ||||| | || |||| Sbjct 2936 GACGTTGAGAATCATTGAAGTATGCTGGGACAGTCACCACAGCAT 2980 >seq73611 Length=1621 Score = 154 bits (170), Expect = 1e-31 Identities = 330/490 (67%), Gaps = 10/490 (2%) Strand=Plus/Plus Query 517814 AGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATTATAATCAATTCCTTCGAACAAAGAA 517873 ||||| || ||| |||| | ||||| ||| || | ||||| || |||||||| ||| Sbjct 10 AGTTCCTCAAATCTAGCACGAGTAATAGTCGAATAGAAGTCAATCCCCTCGAACAACGAA 69 Query 517874 TCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACGTTTAGCACGTTCACATGCT 517933 |||| |||||| || || |||| | || || || | | || || | ||||||||| Sbjct 70 TCAATTTCAATGGTTGTCTGAGCAGTGGATGACAGGGTCCTCTTCGCCCTTTCACATGCA 129 Query 517934 GTCCTTAGTCTTCGTAAGGCTTTTGCTGATTG--ATTCAAATCTGTTTTATATTTTCTCT 517991 ||||| | ||| | | ||| | | | || | | | || | || | || | || Sbjct 130 GTCCTCAATCTCCTGAGAGCTCTGG--GGTTCCCACTGATGTCCTTCTTGTGCTTCCGCT 187 Query 517992 TGAAATCTTCAACACACCATGTTACAAGACGATTATCAAAATCTTCACCTCCCAATTTAG 518051 |||| |||| || | | || | | || || || || || ||||| | | || Sbjct 188 TGAACTCTTGCACGAAGTGATTCACCAACCTGTTGTCGAAGTCCTCCCCTCCTAGGTGAG 247 Query 518052 TATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAGAGACAAAAGAGTTACAT 518111 | | || | ||||| | |||| || | || || |||| | | ||| | |||| Sbjct 248 TGTCACCAGCGGTAGCCTTCACTTCAAATATGCCCTCCTCAATCGTGAGAAGGGACACAT 307 Query 518112 CATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGT--CTTGG----T 518165 || || || ||||| | ||| |||||||| |||||| |||| || | | Sbjct 308 CAAATGTACCTCCACCAAGATCGAAAATAAGGACATTCTTTTCCCCAGAGCTAGTAGCCT 367 Query 518166 TTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACAT 518225 ||||||| |||||||| |||| |||||| ||||| || ||||||||||| |||| |||| Sbjct 368 TTTTATCCAGACCATAGGCAATAGCAGCTGCAGTCGGCTCATTAATAATCCTCATGACAT 427 Query 518226 TAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATG 518285 |||| || | ||| ||| ||||| ||||| || ||||| || || || ||||| || | Sbjct 428 TAAGGCCGGAAATAACTCCGGCATCCTTAGTCGCCTGTCTCTGAGAGTCATTAAAGTAAG 487 Query 518286 CAGGAACAGT 518295 ||||||| || Sbjct 488 CAGGAACCGT 497 >seq1929 Length=7568 Score = 127 bits (140), Expect = 2e-23 Identities = 149/201 (74%), Gaps = 3/201 (1%) Strand=Plus/Minus Query 518090 TCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTC 518149 |||| | ||| | | | |||||| ||||||||||| | |||||| | ||| | |||| Sbjct 3249 TCAATGGTCAAGATACTGACATCAAAAGTTCCACCACCAAGATCAAAGACAAGAATATTC 3190 Query 518150 ATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTA 518209 |||| | ||| | ||||| | ||||| |||| || || ||||||||||||||| Sbjct 3189 TTTTCACCGCCTT---TCTTATCCAACCCATAAGCAATTGCTGCTGCAGTTGGTTCATTA 3133 Query 518210 ATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGT 518269 ||||||| || |||||| | |||||||||| ||| |||||||| || || || || || Sbjct 3132 ATAATTCGCACAACATTCAAACCAGCAATTACTCCAGCATCTTTGGTAGCCTGCCTCTGA 3073 Query 518270 GAATCGTTAAAATATGCAGGA 518290 | ||| || || || || ||| Sbjct 3072 GCATCATTGAAGTAAGCTGGA 3052 Score = 89.7 bits (98), Expect = 4e-12 Identities = 144/207 (70%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 518504 CCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAATTGCAGCTTGATATTTG 518563 ||||| | || || ||||||| || || | |||||||| || || | | || Sbjct 2678 CCAATAAGTCTCTTGACATCAAAGATGGTCCTATCTGGATTAACAGCTGCCAGGTTCTTT 2619 Query 518564 GCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGA 518623 || || || ||||||| || | || ||||| | ||| | ||||| || | ||| Sbjct 2618 GCAGCTTCACCAATCAACCTCTCACTGTCGGTAAAAGCAACCCACGATGGGGTGATACGA 2559 Query 518624 TTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACAACTA 518683 ||||||||||||||||| ||||||||||| | ||||||| | ||||| ||||| Sbjct 2558 TTACCTTGATCATTCGCGATAATTTCAACATGTCCATTTTTGTAAACACCAACACATGAG 2499 Query 518684 AAAGTTGTTCCTAAATCAATACCAATA 518710 | ||||| || | ||||| |||||| Sbjct 2498 TAGGTTGTACCAAGGTCAATGCCAATA 2472 >seq41514 Length=12048 Score = 120 bits (132), Expect = 2e-21 Identities = 193/274 (70%), Gaps = 9/274 (3%) Strand=Plus/Plus Query 518015 ACAAGA--CGATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTA 518072 |||||| ||||||| | ||| ||||||||| | ||||| ||| || || | Sbjct 6801 ACAAGATACGATTATTAG---CTT-ACCTCCCAAATGAGTATCTCCATTTGTTGCAAGAA 6856 Query 518073 CTTGGAAAAGTCCATCTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATAT 518132 | | |||| || | |||| | ||| | | | || ||| ||||||||||| | || Sbjct 6857 CCTCAAAAACACCGTTATCAATGGTCAAGATACTGACGTCAAAAGTTCCACCACCAAGAT 6916 Query 518133 CAAAAATAAGTACATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAG 518192 | || | ||| | |||| |||| ||| | ||||| | ||| ||||||| || | Sbjct 6917 CGAAGACAAGAATATTCTTTTCACCACCTT---TCTTATCCAAACCGTACGCAATTGCTG 6973 Query 518193 CAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTT 518252 | ||||||||||||||||||||||||| |||||| | ||||||||| || ||||||| Sbjct 6974 CTGCAGTTGGTTCATTAATAATTCTCACAACATTCAAACCAGCAATCACACCAGCATCTT 7033 Query 518253 TAGTGGCTTGTCTTTGTGAATCGTTAAAATATGC 518286 | || ||||| || || | ||| || || || || Sbjct 7034 TGGTAGCTTGCCTCTGAGCATCATTGAAGTAAGC 7067 Score = 91.5 bits (100), Expect = 1e-12 Identities = 89/115 (77%), Gaps = 0/115 (0%) Strand=Plus/Plus Query 322241 AAACCGTATGCAAGAGCTGCTGCAGTTGGTTCATTAATTATTTTAAGAACATCTAAACCC 322300 |||||||| |||| ||||||||||||||||||||||| ||| | | ||||| ||||| Sbjct 6955 AAACCGTACGCAATTGCTGCTGCAGTTGGTTCATTAATAATTCTCACAACATTCAAACCA 7014 Query 322301 GCAATTTTAGCAGAATCAAGAGTTGCTTGTCTCTGTGCGTCATTAAAATATGCTG 322355 ||||| | ||| ||| || ||||| ||||| || ||||| || || |||| Sbjct 7015 GCAATCACACCAGCATCTTTGGTAGCTTGCCTCTGAGCATCATTGAAGTAAGCTG 7069 Score = 86.0 bits (94), Expect = 5e-11 Identities = 143/207 (69%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 518504 CCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAATTGCAGCTTGATATTTG 518563 ||||| | ||| || | ||||| ||||| || ||| |||| || || | | || Sbjct 7444 CCAATAAGTCGCTTGACGTCAAAGATAGTCCTGTCTGGGTTAACAGCTGCCAGGTTCTTT 7503 Query 518564 GCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGA 518623 || || || ||||||| || | || ||||| | ||| | || || || ||||| Sbjct 7504 GCAGCTTCACCAATCAACCTCTCGGAGTCCGTAAACGCAACCCACGAAGGGGTGATGCGA 7563 Query 518624 TTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACAACTA 518683 ||||||||||| ||||||||||||||||| | ||||| | | ||||| ||||| Sbjct 7564 TTACCTTGATCGTTCGCAATAATTTCAACATGTCCATTCTTGTAAACACCAACACAGGAG 7623 Query 518684 AAAGTTGTTCCTAAATCAATACCAATA 518710 | ||||| || | ||||| || ||| Sbjct 7624 TAGGTTGTACCAAGGTCAATGCCGATA 7650 >seq121499 Length=2214 Score = 107 bits (118), Expect = 1e-17 Identities = 136/187 (73%), Gaps = 0/187 (0%) Strand=Plus/Plus Query 518174 AGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCA 518233 |||||||| | | ||||| || || ||||||||||||||||| |||| ||| || Sbjct 1539 AGACCATAAGAGAGTGCAGCGGCGGTAGGTTCATTAATAATTCTTTGCACATCAAGCCCT 1598 Query 518234 GCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACA 518293 || ||| | || ||||| || ||||||||||| || | ||| |||||||| || || ||| Sbjct 1599 GCTATTTTCCCAGCATCCTTGGTGGCTTGTCTCTGCGCATCATTAAAATAAGCTGGGACA 1658 Query 518294 GTAATAACGGCATCAGTTACTTCTTTACCAATATAAGCGCTTGCCGTTTGTTTCATTTTA 518353 || ||||| || | |||| || |||| || || || |||| |||||| ||| Sbjct 1659 GTGATAACAGCCTTGTTTACGGACTTCCCAAGGTAGGCTTCCGCAGTTTCTTTCATCTTA 1718 Query 518354 CTTAAAA 518360 | |||| Sbjct 1719 GTCAAAA 1725 Score = 86.0 bits (94), Expect = 5e-11 Identities = 94/125 (75%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 322253 AGAGCTGCTGCAGTTGGTTCATTAATTATTTTAAGAACATCTAAACCCGCAATTTTAGCA 322312 || || || || || ||||||||||| ||| | | ||||| | || || ||||| || Sbjct 1551 AGTGCAGCGGCGGTAGGTTCATTAATAATTCTTTGCACATCAAGCCCTGCTATTTTCCCA 1610 Query 322313 GAATCAAGAGTTGCTTGTCTCTGTGCGTCATTAAAATATGCTGGTACAGTAATAACTGCT 322372 | ||| || ||||||||||| || ||||||||||| ||||| ||||| ||||| || Sbjct 1611 GCATCCTTGGTGGCTTGTCTCTGCGCATCATTAAAATAAGCTGGGACAGTGATAACAGCC 1670 Query 322373 TTATT 322377 || || Sbjct 1671 TTGTT 1675 >seq54199 Length=13578 Score = 104 bits (114), Expect = 2e-16 Identities = 146/205 (71%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 518189 GCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCA 518248 ||||| |||||||| ||||||||||| || ||| | ||| || || ||| | || ||| Sbjct 10135 GCAGCTGCAGTTGGCTCATTAATAATCCTTTGAACGTCAAGTCCTGCTATTTTCCCAGCA 10076 Query 518249 TCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCA 518308 || || |||||||||| || | ||| |||||||| || || ||||| ||||| || | Sbjct 10075 TCCTTGGTGGCTTGTCGCTGCGCATCATTAAAATAAGCTGGGACAGTGATAACTGCCTTG 10016 Query 518309 GTTACTTCTTTACCAATATAAGCGCTTGCCGTTTGTTTCATTTTACTTAAAATCATTGAT 518368 |||| ||| |||| || || || |||| ||||| ||| | |||| | | Sbjct 10015 TTTACAGATTTCCCAAGGTAGGCTTCAGCAGTTTCCTTCATCTTAGTCAAAACAAAAGCG 9956 Query 518369 GAAATTTGTTCTGGGGAATATTGCT 518393 |||||| ||||||||| |||| Sbjct 9955 CCAATTTGACTTGGGGAATACTGCT 9931 Score = 93.3 bits (102), Expect = 3e-13 Identities = 101/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 322253 AGAGCTGCTGCAGTTGGTTCATTAATTATTTTAAGAACATCTAAACCCGCAATTTTAGCA 322312 || || ||||||||||| |||||||| || | |||| || | || || ||||| || Sbjct 10138 AGTGCAGCTGCAGTTGGCTCATTAATAATCCTTTGAACGTCAAGTCCTGCTATTTTCCCA 10079 Query 322313 GAATCAAGAGTTGCTTGTCTCTGTGCGTCATTAAAATATGCTGGTACAGTAATAACTGCT 322372 | ||| || ||||||| ||| || ||||||||||| ||||| ||||| |||||||| Sbjct 10078 GCATCCTTGGTGGCTTGTCGCTGCGCATCATTAAAATAAGCTGGGACAGTGATAACTGCC 10019 Query 322373 TTATTAATAGGTTT 322386 || || | || ||| Sbjct 10018 TTGTTTACAGATTT 10005 >seq75701 Length=1378 Score = 95.1 bits (104), Expect = 9e-14 Identities = 176/258 (68%), Gaps = 3/258 (1%) Strand=Plus/Plus Query 518029 AAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATC 518088 |||||||| ||||||||| | ||| | ||| || || || | |||| |||| Sbjct 4 AAAATCTTTACCTCCCAAATGAGTGTCTCCATTTGTTGCAAGAACCTCAAAAACACCATT 63 Query 518089 TTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATT 518148 || | | ||| | | | |||||| ||||||||||||| ||||| | || | || Sbjct 64 ATCGATGGTCAAGATACTGACATCAAATGTTCCACCACCCAGGTCAAACACCAGAATGTT 123 Query 518149 CATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATT 518208 | | || ||| | || || || || || |||| || || |||||||||||||| Sbjct 124 CTTCTCACCCCCTT---TCTTGTCCAGCCCGTAAGCAATTGCCGCGGCAGTTGGTTCATT 180 Query 518209 AATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTG 518268 ||||| |||| ||||| || ||||| || || |||||||| || || || ||||| Sbjct 181 GATAATCCTCACCACATTCAGCCCAGCGATAACACCAGCATCTTTGGTAGCCTGCCTTTG 240 Query 518269 TGAATCGTTAAAATATGC 518286 | ||| || || || || Sbjct 241 AGCATCATTGAAGTAAGC 258 >seq105507 Length=407 Score = 93.3 bits (102), Expect = 3e-13 Identities = 146/206 (71%), Gaps = 6/206 (3%) Strand=Plus/Plus Query 518108 ACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTCTTGGTTT 518167 |||||| || ||||| || | ||||||| || | | | ||| ||| ||| || Sbjct 160 ACATCAAAAGTGCCACCTCCAAGGTCAAAAACCAGAATAGT---TTCGTTG-CTT--TTC 213 Query 518168 TTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTA 518227 || |||| |||||| || || | |||||||| || ||||| ||||| | | ||| | Sbjct 214 TTTTCAAAACCATAAGCCAACGACGCAGCAGTGGGCTCATTTATAATACGGAGAACCTCT 273 Query 518228 AGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCA 518287 | ||||||||| | || ||||| || || || |||||| ||||| || || |||||| Sbjct 274 AAACCAGCAATACGACCAGCATCCTTTGTTGCAGTTCTTTGAGAATCATTGAAGTATGCA 333 Query 518288 GGAACAGTAATAACGGCATCAGTTAC 518313 ||||| |||| || || | ||| || Sbjct 334 GGAACCGTAACTACTGCTTTAGTAAC 359 >seq34248 Length=10600 Score = 86.0 bits (94), Expect = 5e-11 Identities = 164/239 (69%), Gaps = 6/239 (3%) Strand=Plus/Plus Query 518074 TTGGAAAAGTCCATCTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATC 518133 || ||||| || || |||| | | |||| ||||||| || |||||||| | || Sbjct 607 TTCGAAAATGCCCTCATCAATTGTGAGCAGAGATACATCAAACGTACCACCACCAAGGTC 666 Query 518134 AAAAATAAGTACATTCATTT---CTTTG-TCTTGG--TTTTTATCAAGACCATACGCAAA 518187 ||||| || |||||| ||| | | || | ||||||| |||||||| |||| Sbjct 667 GAAAATCAGCACATTCTTTTTCCCAGAGCTCATAAATTTTTTATGGAGACCATAGGCAAT 726 Query 518188 AGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGC 518247 ||||||||||| || || | || || ||| ||| ||||| || | ||| || || Sbjct 727 GGCAGCAGCAGTAGGCTCGCTGATGATCTTCATAACGTTAAGGCCGGAAATCACGCCCGC 786 Query 518248 ATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCAT 518306 ||| || || ||||||| || || | | ||||| ||||| || || || || |||| Sbjct 787 ATCCTTGGTTGCTTGTCGCTGAGAGTTACTGAAATAAGCAGGCACGGTGATCACAGCAT 845 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3774768705495058