Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ocimum_20tenuiflorum_20[genbank_20GCA_5F001278415.1_202015-09-02] 121,993 sequences; 332,616,730 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq69050 185 7e-41 seq3958 141 7e-28 seq111813 109 4e-18 seq66988 105 5e-17 seq68644 100 2e-15 seq80756 96.9 3e-14 seq55416 93.3 3e-13 seq54199 93.3 3e-13 seq73611 89.7 4e-12 seq1929 89.7 4e-12 seq105507 87.8 1e-11 seq93577 87.8 1e-11 seq77498 86.0 5e-11 >seq69050 Length=7133 Score = 185 bits (204), Expect = 7e-41 Identities = 543/821 (66%), Gaps = 22/821 (3%) Strand=Plus/Minus Query 551781 GCTACTAGTGGAGATTCTCATCTTGGTGGCGAAGATTTTGATAATAGACTGGT--ATCAT 551838 || ||| ||| || |||| ||||| || ||||||||||| || ||| |||| | ||| Sbjct 2735 GCCACTGCTGGTGACACTCACCTTGGAGGTGAAGATTTTGACAACAGAATGGTGAACCAT 2676 Query 551839 GGTGTGTTGAAGATTTTAA-ACGAA--AAAACAAAGTTGATCTATCTACATCTGCCAAAG 551895 | |||| | || ||||| | ||| | || |||| ||| || | || || | | Sbjct 2675 --TTTGTTCAGGAGTTTAAGAGGAAGCACAAGAAAGAC-ATCAATGGAAAT--GCTAGGG 2621 Query 551896 CTCTTCGTCGTCTAAGAACTGCTTGCGAAAGAGCCAAACGAGCTCTTTCATCTGGTACTC 551955 || | | || | || |||||||| || ||||| || | | || |||||| | ||| Sbjct 2620 CTTTAAGGCGGTTGAGGACTGCTTGTGAGAGAGCAAAGAGGACACTCTCATCTACTGCTC 2561 Query 551956 AAACCACTATTGAAGTAGATTCATTATTTGAGGGAATTGATTA-TAATACGCCTATTTCG 552014 ||||||| ||||| | || || | | |||||| |||||| || | | || || | Sbjct 2560 AAACCACCATTGAGATTGACTCTCTCTATGAGGGTGTTGATTTCTACTCCACC-ATCACT 2502 Query 552015 AGGGCCAAATTTGAAGATATTTGTTCT--GATCTCTTTAGAAAAACAATTGAACCAGTAG 552072 | || | |||||| || ||| | || | || || || || |||||||| | Sbjct 2501 CGTGCTAGATTTGAGGAG--TTGAACATGGACTTGTTCAGGAAGTGCATGGAACCAGTTG 2444 Query 552073 AACAAGT-TTTAAGAGATTCAAAGATTGATAAATCCAAAGTACATGAAATTGTGCTTGTT 552131 | |||| ||| || ||| | ||||| || || || | ||||| |||| |||||| Sbjct 2443 AG-AAGTGTTTGAGGGATGCCAAGATGGACAAGAGCACCATCCATGATGTTGTCCTTGTT 2385 Query 552132 GGTGGATCTACAAGAATTCCTAAAATTCGCGAAATGTTAAGTTCTTATTTCAATGGTAAA 552191 ||||| || || |||||||| || | | | | ||| || ||||| || ||| Sbjct 2384 GGTGGTTCCACCAGAATTCCAAAGGTGCAGCAGCTTTTACAAGATTTCTTCAACGGGAAA 2325 Query 552192 AAATTAAATGAAAGTG--TTAATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAG 552249 | | || ||| | |||| || |||||||||||||| |||||||| ||| | |||| Sbjct 2324 GAGCTC--TGCAAGAGCATTAACCCTGATGAGGCTGTTGCATATGGTGCTGCAGTCCAAG 2267 Query 552250 CAGCTATTCTTTCTGGACAAACTGATGAAAAACTACAAAATATTGTACTTGTAGATGTTA 552309 |||| ||| | ||| | | |||| ||| | || || | | ||| ||||||||| Sbjct 2266 CAGCCATTTTGAGTGGTGAGGGTAATGAGAAAGTCCAGGATCTCTTGCTTCTAGATGTTA 2207 Query 552310 CTCCTCTATCTCTTGGTTTAGAAACAGTTGGAGGTATTATGACTAATCTTATCGATAGAA 552369 ||||||| || |||||| | || |||| || ||| | |||||| | ||| || | Sbjct 2206 CTCCTCTCTCCCTTGGTCTGGAGACAGCAGGTGGTGTGATGACTGTGTTGATCCCAAGGA 2147 Query 552370 ATACTACTATTCCTTGTAAAAAATCTCGTGTATTTTCTACGTATTCAGATAATCAAACTG 552429 | ||||| || || || || | || || ||||| || ||||| || || | | Sbjct 2146 ACACTACCATCCCGACCAAGAAGGAGCAGGTTTTCTCTACCTACTCAGACAACCAGCCCG 2087 Query 552430 CTGTTACAATTCAAATTTTTGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTTG 552489 ||| || || | | |||||| || |||| || | || || || |||| Sbjct 2086 GTGTCCTTATCCAGGTCTATGAAGGGGAGAGAACGAGGACCAGGGACAACAACTTGCTTG 2027 Query 552490 GTACTTTTAATTTAGAAGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTA 552549 | | ||| | | ||| ||||||||||| || | || || || || ||| ||| Sbjct 2026 GGAAGTTTGAGCTCTCAGGAATTCCTCCTGCACCAAGGGGTGTTCCTCAGATTACAGTGT 1967 Query 552550 CTTTCGATATCGATGCCAATGGAATTTTGAATGTGACTGCT 552590 ||||| || ||||||||||| || ||||||||| ||||| Sbjct 1966 GCTTCGACATTGATGCCAATGGCATATTGAATGTGTCTGCT 1926 Score = 145 bits (160), Expect = 6e-29 Identities = 251/360 (70%), Gaps = 5/360 (1%) Strand=Plus/Minus Query 550181 GATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGCAGATATGAAG 550240 ||||| || | || ||||||||||| || |||||| | || ||| ||||| ||| Sbjct 3200 GATGCCAAGAGATTGATTGGAAGAAGATTCTCTGATTCCTCCGTACAGAGTGATATTAAG 3141 Query 550241 CATTGGCCTTTCCAAATTGTTAATGTTTCTG--GA-AAACCTTATATTGAAGCTACTCAT 550297 ||||||||| | | || || ||| || ||||| | |||| | || | Sbjct 3140 TTGTGGCCTTTCAAGGTCATTTCTGGACCTGCCGAGAAACCCTTGATTGTTGTTAACTAC 3081 Query 550298 GAAGGATCTGTTAAA-CAATTTTCACCAGAACAAATTTCATCTATGGTTTTAATGAAAAT 550356 |||| | | ||| ||||| | |||| | || || ||||||||| | ||||| || Sbjct 3080 -AAGGGTGAGGAAAAGCAATTCGCTGCAGAGGAGATCTCTTCTATGGTTCTTATGAAGAT 3022 Query 550357 GAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAAGTTACGGATGCAGTAATAACTGTACC 550416 || | | ||| || | | ||||| | ||| | | |||| || | ||||| || Sbjct 3021 GAGGGAGATTGCCGAGGCATATCTTGGTTCATCAGTGAAGAATGCTGTGGTGACTGTCCC 2962 Query 550417 AGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATTGCTGGACT 550476 |||||| || ||||| || |||||||||||||| || |||||||| |||||||| || Sbjct 2961 AGCATACTTCAATGATTCTCAACGTCAAGCTACCAAGGATGCTGGTGTCATTGCTGGTCT 2902 Query 550477 TAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGGACTTGATAA 550536 |||||| | ||||| |||||||| || |||||||| || |||| ||||| ||||| || Sbjct 2901 TAATGTAATGCGTATCATCAATGAGCCGACTGCTGCGGCTATTGCTTATGGTCTTGACAA 2842 >seq3958 Length=7975 Score = 141 bits (156), Expect = 7e-28 Identities = 255/371 (69%), Gaps = 4/371 (1%) Strand=Plus/Plus Query 550169 AATACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAG 550228 |||| ||||| |||||||| | || |||||||| |||| | |||| | | ||||| Sbjct 3279 AATA-TATTTCAGATGCTAAGAGGTTGATTGGAAGGCGTTTCACTGATGCATCGGTTCAA 3337 Query 550229 GCAGATATGAAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGA---AAACCTTATATT 550285 ||||| || ||||| ||| | || || || |||| ||||| ||| Sbjct 3338 AGTGATATTAAATTGTGGCCATTCAAGGTTATTGCTGGACCTGGTGACAAACCCATGATT 3397 Query 550286 GAAGCTACTCATGAAGGATCTGTTAAACAATTTTCACCAGAACAAATTTCATCTATGGTT 550345 | | || | | | || | || |||||| || | ||| | || ||||| |||||| Sbjct 3398 GTTGTTAATTACAAGGGTGAAGAGAAGCAATTTGCAGCTGAAGAGATCTCATCAATGGTT 3457 Query 550346 TTAATGAAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAAGTTACGGATGCAGTA 550405 || ||||| |||| ||| || || | ||||| | ||||| | |||| || Sbjct 3458 TTGATGAAGATGAGGGAAATCGCAGAGGCATACCTTGGTTCTGCAGTTAAGAATGCTGTT 3517 Query 550406 ATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGT 550465 | ||||| ||||| ||||| ||||| || || |||||||| || || |||||||| Sbjct 3518 GTTACTGTTCCAGCTTATTTCAATGATTCTCAGCGTCAAGCCACCAAGGATGCTGGTGTG 3577 Query 550466 ATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATAT 550525 |||||||| || ||||| | || || |||||||| || |||||||||||| |||| ||| Sbjct 3578 ATTGCTGGTCTCAATGTGATGCGAATCATCAATGAGCCCACTGCTGCTGCAATTGCTTAT 3637 Query 550526 GGACTTGATAA 550536 || || || || Sbjct 3638 GGTCTAGACAA 3648 Score = 134 bits (148), Expect = 1e-25 Identities = 523/804 (65%), Gaps = 20/804 (2%) Strand=Plus/Plus Query 551797 CTCATCTTGGTGGCGAAGATTTTGATAATAGACTGGT--ATCATGGTGTGTTGAAGATTT 551854 |||| |||||||| ||||||||||| || ||| |||| | || | |||| | || || Sbjct 3771 CTCACCTTGGTGGTGAAGATTTTGACAACAGAATGGTCAACCAC--TTTGTTCAGGAATT 3828 Query 551855 TAA-ACGAA--AAAACAAAGTTGATCTATCTACATCTGCCAAAGCTCTTCGTCGTCTAAG 551911 ||| | ||| | || |||| || || | || | ||| || || | | | || Sbjct 3829 TAAGAGGAAGCACAAGAAAGAC-AT-TAGCGGCAACC-CCAGGGCCCTGAGAAGGTTGAG 3885 Query 551912 AACTGCTTGCGAAAGAGCCAAACGAGCTCTTTCATCTGGTACTCAAACCACTATTGAAGT 551971 || ||||| || || || || || | || || || | | || ||||| ||||| | Sbjct 3886 GACAGCTTGTGAGAGGGCGAAGAGAACACTCTCTTCCACTGCCCAGACCACAATTGAGAT 3945 Query 551972 AGATTCATTATTTGAGGGAATTGATTATAATACGCCTATTTCGAGGGCCAAATTTGAAGA 552031 ||||| | | |||||| ||||||| | | | || || | | || | |||||| || Sbjct 3946 TGATTCTCTGTATGAGGGTATTGATTTTTACGCCCCCATCACTCGTGCTAGATTTGAGGA 4005 Query 552032 TATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCAGTAGAACAAGTT-TTAAGAGATT 552090 | || | || || || || || || || || |||| || || ||| Sbjct 4006 GCTCAACATGGACTTGTTCAGGAAGTGTATGGAGCCTGTTGAG-AAGTGCTTGAGGGATG 4064 Query 552091 CAAAGATTGATAAATCCAAAGTACATGAAATTGTGCTTGTTGGTGGATCTACAAGAATTC 552150 | ||||| || || | || || || |||| ||||||||||| || || ||||||| Sbjct 4065 CCAAGATGGACAAGAGCTCTGTCCACGATGTTGTCCTTGTTGGTGGTTCCACCAGAATTC 4124 Query 552151 CTAAAATTCGCGAAATGTTA-AGTTCTTATTTCAATGGTAAAAAATTAAATGAAAGTG-- 552207 | ||| ||| | |||| || ||| || ||| || || | | || ||| | Sbjct 4125 CCAAAGTTCAGCAGTTGTTGCAGGACTTCTT-CAACGGGAAGGAGCTG--TGCAAGAGCA 4181 Query 552208 TTAATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATTCTTTCTGGAC 552267 | || ||||||||||||||||| |||||||| || ||||||| || ||| | ||| Sbjct 4182 TCAACCCAGATGAGGCTGTTGCTTATGGTGCAGCCGTTCAAGCTGCCATTTTGAGTGGTG 4241 Query 552268 AAACTGATGAAAAACTACAAAATATTGTACTTGTAGATGTTACTCCTCTATCTCTTGGTT 552327 | | | || || | || || | | ||| | ||||| ||||| || ||||| |||| Sbjct 4242 AGGGTAACGAGAAGGTCCAGGATTTGTTGCTTCTTGATGTCACTCCGCTCTCTCTGGGTT 4301 Query 552328 TAGAAACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAATACTACTATTCCTTGTA 552387 | ||||| | || || | |||||| | ||| ||| || || || |||||| | Sbjct 4302 TGGAAACTGCAGGTGGGGTCATGACTGTGTTGATCCCTAGGAACACAACCATTCCTACCA 4361 Query 552388 AAAAATCTCGTGTATTTTCTACGTATTCAGATAATCAAACTGCTGTTACAATTCAAATTT 552447 | || | || || || || ||||| || || || ||| || ||||| ||| Sbjct 4362 AGAAGGAGCAAGTCTTCTCGACTTATTCGGACAACCAGCCTGGCGTGTTGATTCAGGTTT 4421 Query 552448 TTGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTTGGTACTTTTAATTTAGAAG 552507 ||| || ||||||| | || | || || || || || | ||| | | | Sbjct 4422 ATGAGGGTGAAAGAACAAGGACAAGGGACAACAACTTGCTCGGAAAGTTTGAGCTCTCTG 4481 Query 552508 GTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGT-TACTTTCGATATCGATGCC 552566 | ||||| ||||||||| | ||||| || || ||| || | |||| || ||||| ||| Sbjct 4482 GCATTCCACCTGCTCCTAGGGGAGTTCCTCAGATTACGGTGTGCTTT-GACATCGACGCC 4540 Query 552567 AATGGAATTTTGAATGTGACTGCT 552590 ||||| || |||||||| ||||| Sbjct 4541 AATGGTATATTGAATGTTTCTGCT 4564 >seq111813 Length=4153 Score = 109 bits (120), Expect = 4e-18 Identities = 155/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 563257 AGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTT 563316 |||| ||| |||||||| || || |||||| ||||||||||| || || ||||| Sbjct 1773 AGACAGAGGACAAGATGGAGAGTGGATTCTTTTTGGATATTGTAATCCGCAAGGGTTCTG 1832 Query 563317 GAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCT 563376 ||| || || || ||||| || || || | || ||||| ||||||||||||||||| Sbjct 1833 CCATCATCGAGCTGCTTTCCAGCGAAGATCAACCTCTGCTGGTCAGGAGGAATTCCTTCC 1892 Query 563377 TTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACATTCGAGAGTA 563436 || |||||||| || || || ||||| || || | | | ||||| || Sbjct 1893 TTGTCTTGAATCTTAGCCTTGACGTTGTCAATGGTGTCGGAGCTCTCAACCTCGAGGGTG 1952 Query 563437 ACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 | || || |||||||| || ||||| || |||||||| Sbjct 1953 ATTGTCTTTCCAGTAAGTGTCTTAACAAAGATTTGCAT 1990 Score = 105 bits (116), Expect = 5e-17 Identities = 158/221 (71%), Gaps = 5/221 (2%) Strand=Plus/Plus Query 563257 AGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGC-TAGAGTTCT 563315 ||||| || || ||||||||||| ||| || ||| ||||||| || ||| ||||| Sbjct 1338 AGACGCAGCACGAGATGAAGGGTGGATTCCTTTTGAATGCTGTAATCTGCCTAGTGTTCT 1397 Query 563316 TGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTC 563375 |||||| ||||| || || ||||| | || || |||||| || || || || ||||| Sbjct 1398 GCCATCTTCCAGTTGCTTCCCAGCAAAGAAAAATCGTTGCTGCTCGGGGGGGATCCCTTC 1457 Query 563376 TTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACA--TTCGAGA 563433 |||||||| ||||| || || || || || || || | | || ||| || Sbjct 1458 TTTATCTTAGATTTTGGCCTTGACGTTGTCGATAGTGTC--TGAGCTTTCAACTTCAAGG 1515 Query 563434 GTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 || | || || |||| ||||||||| |||||||| ||||| Sbjct 1516 GTTATCGTCTTGCCAGCAAGAGTTTTCACGAAAATCTGCAT 1556 >seq66988 Length=1372 Score = 105 bits (116), Expect = 5e-17 Identities = 157/220 (71%), Gaps = 2/220 (1%) Strand=Plus/Plus Query 563256 GAGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCT 563315 |||||| || || |||||||| || ||| || |||||||||||| || || |||| Sbjct 150 GAGACGAAGAACGAGATGAAGAGTCGATTCCTTCTGAATATTGTAATCCGCAAGGGTTCG 209 Query 563316 TGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTC 563375 | ||||| || || |||||||| || || || | |||||||| || ||||||||||| Sbjct 210 TCCGTCTTCGAGCTGCTTTCCGGCGAAGATCAGGCGCTGCTGATCGGGCGGAATTCCTTC 269 Query 563376 TTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAG-TGTGAGTACATTCGAGAG 563434 |||||||| || || || || || || ||||||| | || ||||||| Sbjct 270 CTTATCTTGGATCTTCGCCTTGACGTTGTCGATGGTATCAGAACTCTCGAC-CTCGAGAG 328 Query 563435 TAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 | | || || || || || ||||| ||||| || ||||| Sbjct 329 TGATCGTCTTTCCGGTTAGGGTTTTCACGAAGATCTGCAT 368 >seq68644 Length=4185 Score = 100 bits (110), Expect = 2e-15 Identities = 264/398 (66%), Gaps = 15/398 (4%) Strand=Plus/Plus Query 368600 GAAGTAGGTTTTGGGGAACTCCAATTCCAGTATGGAAATCTGATGATGGTGAAGAAATTG 368659 |||||||||||||||| || || |||| |||||| ||| || ||| |||| || Sbjct 1551 GAAGTAGGTTTTGGGGGACCCCTCTTCCTATATGGATCAGTGAAGACGGTCAAGAGATCA 1610 Query 368660 TTTGTATAGGTTCAATTAAAGAATTGCAAGAATTATCTGGTGTGCAAAATATTAGTGATT 368719 || || | ||| || || || || || || | ||||||| | || | | || | Sbjct 1611 TTGTCATGGATTCCGTTGAAAAACTGGAAAAACTTTCTGGTGAG---AAGGTGACCGACT 1667 Query 368720 TACATATTGATAAAATTGATCACATTAAAATTCCATCAAAGAAAGGAAAAGG-TTTATTG 368778 | ||| | ||||||||||||| |||| || || |||| ||| || ||| || Sbjct 1668 TGCATCGTCATAAAATTGATCATATTACTATCCCTTCAAGTCGAGGCCCAGAATTTGGTG 1727 Query 368779 T-CT----CGAGTTGAAGGAGTTTTGGATTGCTGGTTTGAATCAGGTTCTATGCCTTATG 368833 | || ||||| || | || || ||||||||||| || || || |||||||| | Sbjct 1728 TTCTTCGCCGAGTGGAGGATGTGTTTGATTGCTGGTTCGAGAGTGGGTCCATGCCTTACG 1787 Query 368834 GTCAAATACATTATCCATTTGATAACGCAAAATACTTTGATAATGATAAAGATTATGTGG 368893 | | || |||||||||||||| || | || ||||| || || || ||| Sbjct 1788 CTTATATCCATTATCCATTTGAGAATGTGGAACTATTTGAGAACAAT-----TTCCCTGG 1842 Query 368894 CTGATTTTGTAACAGAATCAATTGATCAAACACGTGGTTGGTTTTATACCCTATTAGTAT 368953 | ||||||| | || | |||||||| ||||| ||||| ||||| || | || Sbjct 1843 -TCATTTTGTGGCTGAGGGTCTGGATCAAACTCGTGGATGGTTCTATACTCTCATGGTTC 1901 Query 368954 TATCCACAGCTATTTTCGATAAACCGGCTTTTAAAAAT 368991 | || || || |||| | || || ||||| | |||| Sbjct 1902 TTTCAACTGCACTTTTTGGAAAGCCTGCTTTCAGAAAT 1939 >seq80756 Length=2294 Score = 96.9 bits (106), Expect = 3e-14 Identities = 89/113 (79%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 550400 GCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCT 550459 ||||| |||| |||||||| || ||||||||||| || | || || || |||||| Sbjct 1236 GCAGTTGTAACAGTACCAGCCTACTTTAATGACTCGCAGAGAACTGCAACGAAGGATGCT 1177 Query 550460 GGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGC 550512 || ||||| ||||| | |||||||||| ||||| ||||||||||| ||||| Sbjct 1176 GGTCGTATCGCTGGCTTGGATGTTCTTCGCATTATTAATGAACCTACAGCTGC 1124 >seq55416 Length=9261 Score = 93.3 bits (102), Expect = 3e-13 Identities = 92/119 (77%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 563266 ACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCTTCA 563325 ||||| ||||| || |||||| ||||||||||| || | ||||| |||||| Sbjct 3928 ACAAGGTGAAGTGTTGATTCTTTCTGGATATTGTAATCTGCCAAGGTTCTACCATCTTCC 3987 Query 563326 AGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTG 563384 | |||||| |||||||| || || || |||||||||||||| || |||||||| || || Sbjct 3988 AATTGTTTACCGGCAAATATTAGCCTCTGCTGATCAGGAGGTATGCCTTCTTTGTCCTG 4046 >seq54199 Length=13578 Score = 93.3 bits (102), Expect = 3e-13 Identities = 99/131 (76%), Gaps = 0/131 (0%) Strand=Plus/Plus Query 550400 GCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCT 550459 ||||| || ||||| ||||| ||||||||||| | || || ||||| || || |||||| Sbjct 10020 GCAGTTATCACTGTCCCAGCTTATTTTAATGATGCGCAGCGACAAGCCACCAAGGATGCT 10079 Query 550460 GGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTT 550519 || || || |||||| | |||| | ||||| ||||| || ||||| |||||||| Sbjct 10080 GGGAAAATAGCAGGACTTGACGTTCAAAGGATTATTAATGAGCCAACTGCAGCTGCACTC 10139 Query 550520 GCATATGGACT 550530 | ||||| || Sbjct 10140 TCTTATGGCCT 10150 >seq73611 Length=1621 Score = 89.7 bits (98), Expect = 4e-12 Identities = 97/129 (75%), Gaps = 0/129 (0%) Strand=Plus/Minus Query 550409 ACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATT 550468 || || || || || ||||||||||| || | || || ||||| ||||| ||| |||| Sbjct 497 ACGGTTCCTGCTTACTTTAATGACTCTCAGAGACAGGCGACTAAGGATGCCGGAGTTATT 438 Query 550469 GCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGGA 550528 | || |||||||| | | ||||| ||||| || ||||| ||||| |||| ||||| Sbjct 437 TCCGGCCTTAATGTCATGAGGATTATTAATGAGCCGACTGCAGCTGCTATTGCCTATGGT 378 Query 550529 CTTGATAAA 550537 || |||||| Sbjct 377 CTGGATAAA 369 Score = 87.8 bits (96), Expect = 1e-11 Identities = 135/191 (71%), Gaps = 4/191 (2%) Strand=Plus/Minus Query 549991 AGCTATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAA 550050 ||| || ||||| ||||| || || || ||| || || || || ||||| | | Sbjct 1371 AGCGATCGGTATCGATTTGGGGACGACTTATTCGTGCGTGGGGGTGTGGCAGCACGACCG 1312 Query 550051 AGTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCAC 550110 ||||| ||||| ||||||||||| || ||| |||| ||||| || ||||| | ||||| Sbjct 1311 CGTTGAGATTATAGCCAATGATCAGGGCAACCGAACGACTCCGTCATATGTGGCGTTCAC 1252 Query 550111 GGAAACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAG--CCACTGGTAATCCTACC 550168 || || || | | | ||||||| || || || |||||| || || |||||| | Sbjct 1251 CGACACCGAGCGTCTTATTGGTGACGCCGCGAAGAATCAAGTAGCAATG--AATCCTGTC 1194 Query 550169 AATACTATTTT 550179 || ||| |||| Sbjct 1193 AACACTGTTTT 1183 >seq1929 Length=7568 Score = 89.7 bits (98), Expect = 4e-12 Identities = 93/122 (76%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 550415 CCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATTGCTGGA 550474 ||||| || || ||||| | || | || ||||| |||||||||||| |||||||| Sbjct 3053 CCAGCTTACTTCAATGATGCTCAGAGGCAGGCTACCAAAGATGCTGGAGTAATTGCTGGT 3112 Query 550475 CTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGGACTTGAT 550534 | |||||| | || ||||| |||||||| ||||| || ||| |||| ||||| | ||| Sbjct 3113 TTGAATGTTGTGCGAATTATTAATGAACCAACTGCAGCAGCAATTGCTTATGGGTTGGAT 3172 Query 550535 AA 550536 || Sbjct 3173 AA 3174 >seq105507 Length=407 Score = 87.8 bits (96), Expect = 1e-11 Identities = 107/146 (73%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 550391 GTTACGGATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACT 550450 ||||| | |||||| | || || || ||||| || ||||| || ||| | || || Sbjct 359 GTTACTAAAGCAGTAGTTACGGTTCCTGCATACTTCAATGATTCTCAAAGAACTGCAACA 300 Query 550451 AAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCT 550510 || |||||||| ||||||||||| | | ||||| |||||||| ||||| || |||||| Sbjct 299 AAGGATGCTGGTCGTATTGCTGGTTTAGAGGTTCTCCGTATTATAAATGAGCCCACTGCT 240 Query 550511 GCTGCACTTGCATATGGACTTGATAA 550536 || | | || ||||| |||| || Sbjct 239 GCGTCGTTGGCTTATGGTTTTGAAAA 214 >seq93577 Length=12542 Score = 87.8 bits (96), Expect = 1e-11 Identities = 99/130 (76%), Gaps = 2/130 (2%) Strand=Plus/Minus Query 720789 TCCATCCCTTCCTGCACGACCAATTTCTTGATAATATCCTTCAATATTTTTAGGTGCA-C 720847 |||||| || || ||| ||| |||| ||||||||| ||| | | | || || ||| | Sbjct 6699 TCCATCTCTGCCACAACGCCCACTTTCCTGATAATATGATTCCAAACTCTTTGG-GCAGC 6641 Query 720848 CATAATGTATAACTGCTCTCACATCACTTTTATTTATTCCCATTCCAAAAGCAATCGTCG 720907 ||||||||||||| ||| | |||| ||| | || ||||| ||||||||||| || | Sbjct 6640 CATAATGTATAACAAGTCTTATATCAGGTTTGTCAATCCCCATACCAAAAGCAATAGTTG 6581 Query 720908 CAACCATAAC 720917 |||||||||| Sbjct 6580 CAACCATAAC 6571 >seq77498 Length=521 Score = 86.0 bits (94), Expect = 5e-11 Identities = 143/205 (70%), Gaps = 4/205 (2%) Strand=Plus/Minus Query 551953 CTCAAACCACTATTGAAGTAGATTCATTATTTGAGGGAATTGATTATAATACGCCT--AT 552010 ||||||| || || || | || ||||| | ||| || ||||||| |||||| || Sbjct 464 CTCAAACTACGATCGAGATCGACTCATTGTATGAAGGCATTGATTTC--TACGCCACGAT 407 Query 552011 TTCGAGGGCCAAATTTGAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCAGT 552070 | |||| || | || || || || ||| | || || ||| || || || || Sbjct 406 TACGAGAGCGAGGTTCGAGGAGATGAACATGGATTTATTCAGGAAATGCATGGAGCCGGT 347 Query 552071 AGAACAAGTTTTAAGAGATTCAAAGATTGATAAATCCAAAGTACATGAAATTGTGCTTGT 552130 || || ||| || |||||||||||||| ||| | |||| || || | || ||||| Sbjct 346 TGAGAAATGTTTGAGGGATTCAAAGATTGACAAAAGCCAAGTTCACGACGTAGTTCTTGT 287 Query 552131 TGGTGGATCTACAAGAATTCCTAAA 552155 ||||||||| ||||||||||| ||| Sbjct 286 TGGTGGATCCACAAGAATTCCAAAA 262 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4022844459971570