Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ocimum_20tenuiflorum_20[genbank_20GCA_5F001278415.1_202015-09-02] 121,993 sequences; 332,616,730 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq69050 255 4e-62 seq3958 248 6e-60 seq73611 154 1e-31 seq1929 127 2e-23 seq41514 120 2e-21 seq121499 107 1e-17 seq54199 100 2e-15 seq75701 95.1 9e-14 seq105507 93.3 3e-13 seq76578 86.0 5e-11 >seq69050 Length=7133 Score = 255 bits (282), Expect = 4e-62 Identities = 559/825 (68%), Gaps = 22/825 (3%) Strand=Plus/Plus Query 281663 GTCATAATACCACCAGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACA 281722 ||||| | |||||| ||||| || | |||||| || |||||||| ||||| | || | Sbjct 2164 GTCATCACACCACCTGCTGTCTCCAGACCAAGGGAGAGAGGAGTAACATCTAGAAGCAAG 2223 Query 281723 ATATTTTGAAGTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCA 281782 | || || | ||| |||| | | |||| | ||| |||||||| | ||||||||| Sbjct 2224 AGATCCTGGACTTTCTCATTACCCTCACCACTCAAAATGGCTGCTTGGACTGCAGCACCA 2283 Query 281783 TATGCAACAGCTTCATCAGGATTAA--CAGTTTCATTTAGTTTTTTACCATTGAAAAAAT 281840 ||||||||||| |||||||| |||| | || || || | ||| || ||||| |||| Sbjct 2284 TATGCAACAGCCTCATCAGGGTTAATGCTCTTGCAG--AGCTCTTTCCCGTTGAAGAAAT 2341 Query 281841 -TTGAAAGAAGTTGTCTTACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCA 281899 ||| || ||| || ||||| ||||| | | || || ||||| | |||| ||| Sbjct 2342 CTTGTAA-AAGCTGCTGCACCTTTGGAATTCTGGTGGAACCACCAACAAGGACAACATCA 2400 Query 281900 TGCACCTGTGAT-TTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACC 281958 || | ||| | || |||| || | |||| ||| || ||||| ||||| | | Sbjct 2401 TGGATG-GTGCTCTTGTCCATCTTGGCATCCCTCAAACACTTCTCAACTGGTTCCATGCA 2459 Query 281959 AGCTCTAAACAAGTC--TGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATTA 282016 || |||||||| || ||| || || ||| |||| | ||| | ||| | Sbjct 2460 CTTCCTGAACAAGTCCATGTTCAAC--TCCTCAAATCTAGCACGAGTGATGGTGGAGTAG 2517 Query 282017 TAATCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGT 282076 |||||| || || | | ||| |||| ||||| || ||||||| | ||| || ||| Sbjct 2518 AAATCAACACCCTCATAGAGAGAGTCAATCTCAATGGTGGTTTGAGCAGTAGATGAGAGT 2577 Query 282077 GCACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGATTGATTC 282136 | | || || | ||||| || ||||| | | | ||| || | || | ||| Sbjct 2578 GTCCTCTTTGCTCTCTCACAAGCAGTCCTCAACCGCCTTAAAGCCCTAGCATTTCCATTG 2637 Query 282137 AAATCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATGTTACAAGA--CGATTAT 282194 | ||| | || | || ||||| || || | |||| | ||| | || | | || | Sbjct 2638 ATGTCTTTCTTGTGCTTCCTCTTAAACTCCTGAACAAA--ATGGTTCACCATTCTGTTGT 2695 Query 282195 CAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCAT 282254 |||||||||||||||| | | ||| | || | || || | || | || | || | Sbjct 2696 CAAAATCTTCACCTCCAAGGTGAGTGTCACCAGCAGTGGCCTTCACCTCAAAGATCCCTT 2755 Query 282255 CTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTACAT 282314 | |||| | || ||||| ||||||| ||| |||||||| | ||||||||| || |||| Sbjct 2756 CCTCAATGGTCAGAAGAGAAACATCAAAGGTGCCACCACCAAGATCAAAAATCAGGACAT 2815 Query 282315 TCATTTCTTTGTCT-TGGT-----TTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTG 282368 || |||| | |||| | || ||||||||||| |||| ||| |||||||| | Sbjct 2816 TCTTTTCACCAACACTGGTAGCCTTCTTGTCAAGACCATAAGCAATAGCCGCAGCAGTCG 2875 Query 282369 GTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTT 282428 | ||||| || || | || ||||||||||||||||| || ||||| || || |||| Sbjct 2876 GCTCATTGATGATACGCATTACATTAAGACCAGCAATGACACCAGCATCCTTGGTAGCTT 2935 Query 282429 GTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCAT 282473 | | ||| ||||| || || ||||| || ||||| | || |||| Sbjct 2936 GACGTTGAGAATCATTGAAGTATGCTGGGACAGTCACCACAGCAT 2980 >seq3958 Length=7975 Score = 248 bits (274), Expect = 6e-60 Identities = 840/1293 (65%), Gaps = 24/1293 (2%) Strand=Plus/Minus Query 281426 GCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACC 281485 |||| ||||| | ||||||||||| || | ||||| || ||| ||||| || Sbjct 4563 GCAGAAACATTCAATATACCATTGGCGTCGATGTCAAAGCACACCGTAATCTGAGGAACT 4504 Query 281486 CCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTA 281545 || || |||||||||| || || | | ||| |||| || || || || | Sbjct 4503 CCCCTAGGAGCAGGTGGAATGCCAGAGAGCTCAAACTTTCCGAGCAAGTTGTTGTCCCTT 4444 Query 281546 GTGAATTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAA 281605 || | ||| ||||||||| ||| || || || ||| || || || |||||| Sbjct 4443 GTCCTTGTTCTTTCACCCTCATAAACCTGAATCAACACGCCAGGCTGGTTGTCCGAATAA 4384 Query 281606 GTTGTAAATACTCTGGATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTC 281665 || | || ||| || || |||||| |||||||| ||| || | ||| Sbjct 4383 GTCGAGAAGACTTGCTCCTTCTTGGTAGGAATGGTTGTGTTCCTAGGGATCAACACAGTC 4324 Query 281666 ATAATACCACCAGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATA 281725 || | ||||| || ||||| ||||| ||||| || ||||||||||||| || | | | Sbjct 4323 ATGACCCCACCTGCAGTTTCCAAACCCAGAGAGAGCGGAGTGACATCAAGAAGCAACAAA 4264 Query 281726 TTTTGAAGTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATAT 281785 | || | || || | | | |||| | ||| || ||||||| || |||||||| Sbjct 4263 TCCTGGACCTTCTCGTTACCCTCACCACTCAAAATGGCAGCTTGAACGGCTGCACCATAA 4204 Query 281786 GCAACAGCTTCATCAGGATTAA--CAGTTTCATTTAGTTTTTTACCATTGAAAAAATT-T 281842 |||||||| ||||| || || | | || || || | || || ||||| || | | Sbjct 4203 GCAACAGCCTCATCTGGGTTGATGCTCTTGCAC--AGCTCCTTCCCGTTGAAGAAGTCCT 4146 Query 281843 GAAAGAAGTTGTCTTACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGC 281902 | || || | | || || ||||| | | || || ||||| | |||| || || Sbjct 4145 GCAACAACTGCTGA-ACTTTGGGAATTCTGGTGGAACCACCAACAAGGACAACATCGTGG 4087 Query 281903 ACCTGTGAT-TTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCAGC 281961 || | | | || |||| || | |||| || || ||||| || || | || Sbjct 4086 ACA-GAGCTCTTGTCCATCTTGGCATCCCTCAAGCACTTCTCAACAGGCTCCATACACTT 4028 Query 281962 TCTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATTATAATC 282021 || |||||||| || || || ||| |||| | ||| | | | | | | |||| Sbjct 4027 CCTGAACAAGTCCATGTTGAGCTCCTCAAATCTAGCACGAGTGATGGGGGCGTAAAAATC 3968 Query 282022 AATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACG 282081 ||| || || ||| |||||||| ||||| || || || | | ||||| |||| | Sbjct 3967 AATACCCTCATACAGAGAATCAATCTCAATTGTGGTCTGGGCAGTGGAAGAGAGTGTTCT 3908 Query 282082 TTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGATTGATTCAAATC 282141 || || | ||||| |||||||| | |||| | ||| | | | ||| | ||| Sbjct 3907 CTTCGCCCTCTCACAAGCTGTCCTCAACCTTCTCAGGGCCCTGG--GGTTGCCGCTAATG 3850 Query 282142 TGTTTTATAT--TTTCTCTTGAAATCTTCAACACACCATGTTACAAGACGATTATCAAAA 282199 | ||| | | || ||||| || || | |||| | | || | | || |||||| Sbjct 3849 TCTTTCTTGTGCTTCCTCTTAAATTCCTGAACAAAGTGGTTGACCATTCTGTTGTCAAAA 3790 Query 282200 TCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCA 282259 |||||||| || | | ||| | |||| || || | |||| || | || || ||| Sbjct 3789 TCTTCACCACCAAGGTGAGTGTCACCTGCTGTTGCCTTCACTTCAAAGATACCCTCCTCA 3730 Query 282260 AGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATT 282319 | | | || | |||||| ||| ||||| || | ||||||||| || || ||| | Sbjct 3729 ATCGTGAGCAGGGAGACATCAAAGGTACCACCTCCAAGATCAAAAATTAGAACGTTCTTC 3670 Query 282320 TCTTTGTC-----TTGGTTT-TTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCA 282373 ||| | | ||| ||| || || |||||||| |||| ||||||||||| || ||| Sbjct 3669 TCTCCGACACTGGTTGCTTTCTTGTCTAGACCATAAGCAATTGCAGCAGCAGTGGGCTCA 3610 Query 282374 TTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTT 282433 || || |||| || ||||| ||||||||||| || ||||| || |||||||| | Sbjct 3609 TTGATGATTCGCATCACATTGAGACCAGCAATCACACCAGCATCCTTGGTGGCTTGACGC 3550 Query 282434 TGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCTGTTACTTCTTTTCCAATA 282493 || ||||| || ||||| || |||||||||| ||| |||| | ||| | |||| Sbjct 3549 TGAGAATCATTGAAATAAGCTGGAACAGTAACAACAGCATTCTTAACTGCAGAACCAAGG 3490 Query 282494 TAAGCGCTTGCTGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGAGAA 282553 || || ||| ||| |||| || | |||| ||||||||| || | ||| | | | Sbjct 3489 TATGCCTCTGCGATTTCCCTCATCTTCATCAAAACCATTGATGAGATCTCTTCAGCTGCA 3430 Query 282554 TATTGCTTGGATTCA-TTTTGATATGATACTTCAAAATATGGTTTATTACCA---ACATT 282609 ||||||| |||| ||| || | || ||| ||||| | |||| || Sbjct 3429 AATTGCTTCTCTTCACCCTTGTAATTA-ACAACAATCATGGGTTTGTCACCAGGTCCAGC 3371 Query 282610 AATAACTTTAAATGGCCAATATTTCATATCTGATTGAACACTTTGGTCATTAAAATCTCT 282669 |||||| || |||||||| |||| ||||| |||||| | ||| | ||| || Sbjct 3370 AATAACCTTGAATGGCCACAATTTAATATCACTTTGAACCGATGCATCAGTGAAACGCCT 3311 Query 282670 ACCAATTAATCGTTTTGCATCAAAAATAGTATT 282702 ||||| || | || ||||| ||||| |||| Sbjct 3310 TCCAATCAACCTCTTAGCATCTGAAATA-TATT 3279 >seq73611 Length=1621 Score = 154 bits (170), Expect = 1e-31 Identities = 330/490 (67%), Gaps = 10/490 (2%) Strand=Plus/Plus Query 281981 AGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATTATAATCAATTCCTTCGAACAAAGAA 282040 ||||| || ||| |||| | ||||| ||| || | ||||| || |||||||| ||| Sbjct 10 AGTTCCTCAAATCTAGCACGAGTAATAGTCGAATAGAAGTCAATCCCCTCGAACAACGAA 69 Query 282041 TCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACGTTTAGCACGTTCACATGCT 282100 |||| |||||| || || |||| | || || || | | || || | ||||||||| Sbjct 70 TCAATTTCAATGGTTGTCTGAGCAGTGGATGACAGGGTCCTCTTCGCCCTTTCACATGCA 129 Query 282101 GTCCTTAGTCTTCGTAAGGCTTTTGCTGATTG--ATTCAAATCTGTTTTATATTTTCTCT 282158 ||||| | ||| | | ||| | | | || | | | || | || | || | || Sbjct 130 GTCCTCAATCTCCTGAGAGCTCTGG--GGTTCCCACTGATGTCCTTCTTGTGCTTCCGCT 187 Query 282159 TGAAATCTTCAACACACCATGTTACAAGACGATTATCAAAATCTTCACCTCCCAATTTAG 282218 |||| |||| || | | || | | || || || || || ||||| | | || Sbjct 188 TGAACTCTTGCACGAAGTGATTCACCAACCTGTTGTCGAAGTCCTCCCCTCCTAGGTGAG 247 Query 282219 TATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAGAGACAAAAGAGTAACAT 282278 | | || | ||||| | |||| || | || || |||| | | ||| | |||| Sbjct 248 TGTCACCAGCGGTAGCCTTCACTTCAAATATGCCCTCCTCAATCGTGAGAAGGGACACAT 307 Query 282279 CATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGT--CTTGG----T 282332 || || || ||||| | ||| |||||||| |||||| |||| || | | Sbjct 308 CAAATGTACCTCCACCAAGATCGAAAATAAGGACATTCTTTTCCCCAGAGCTAGTAGCCT 367 Query 282333 TTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACAT 282392 ||||||| |||||||| |||| |||||| ||||| || ||||||||||| |||| |||| Sbjct 368 TTTTATCCAGACCATAGGCAATAGCAGCTGCAGTCGGCTCATTAATAATCCTCATGACAT 427 Query 282393 TAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATG 282452 |||| || | ||| ||| ||||| ||||| || ||||| || || || ||||| || | Sbjct 428 TAAGGCCGGAAATAACTCCGGCATCCTTAGTCGCCTGTCTCTGAGAGTCATTAAAGTAAG 487 Query 282453 CAGGAACAGT 282462 ||||||| || Sbjct 488 CAGGAACCGT 497 >seq1929 Length=7568 Score = 127 bits (140), Expect = 2e-23 Identities = 149/201 (74%), Gaps = 3/201 (1%) Strand=Plus/Minus Query 282257 TCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTC 282316 |||| | ||| | | | |||||| ||||||||||| | |||||| | ||| | |||| Sbjct 3249 TCAATGGTCAAGATACTGACATCAAAAGTTCCACCACCAAGATCAAAGACAAGAATATTC 3190 Query 282317 ATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTA 282376 |||| | ||| | ||||| | ||||| |||| || || ||||||||||||||| Sbjct 3189 TTTTCACCGCCTT---TCTTATCCAACCCATAAGCAATTGCTGCTGCAGTTGGTTCATTA 3133 Query 282377 ATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGT 282436 ||||||| || |||||| | |||||||||| ||| |||||||| || || || || || Sbjct 3132 ATAATTCGCACAACATTCAAACCAGCAATTACTCCAGCATCTTTGGTAGCCTGCCTCTGA 3073 Query 282437 GAATCGTTAAAATATGCAGGA 282457 | ||| || || || || ||| Sbjct 3072 GCATCATTGAAGTAAGCTGGA 3052 Score = 95.1 bits (104), Expect = 9e-14 Identities = 145/207 (70%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 282671 CCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAACTGCAGCTTGATATTTG 282730 ||||| | || || ||||||| || || | ||||||||| || || | | || Sbjct 2678 CCAATAAGTCTCTTGACATCAAAGATGGTCCTATCTGGATTAACAGCTGCCAGGTTCTTT 2619 Query 282731 GCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGA 282790 || || || ||||||| || | || ||||| | ||| | ||||| || | ||| Sbjct 2618 GCAGCTTCACCAATCAACCTCTCACTGTCGGTAAAAGCAACCCACGATGGGGTGATACGA 2559 Query 282791 TTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACAACTA 282850 ||||||||||||||||| ||||||||||| | ||||||| | ||||| ||||| Sbjct 2558 TTACCTTGATCATTCGCGATAATTTCAACATGTCCATTTTTGTAAACACCAACACATGAG 2499 Query 282851 AAAGTTGTTCCTAAATCAATACCAATA 282877 | ||||| || | ||||| |||||| Sbjct 2498 TAGGTTGTACCAAGGTCAATGCCAATA 2472 >seq41514 Length=12048 Score = 120 bits (132), Expect = 2e-21 Identities = 193/274 (70%), Gaps = 9/274 (3%) Strand=Plus/Plus Query 282182 ACAAGA--CGATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTA 282239 |||||| ||||||| | ||| ||||||||| | ||||| ||| || || | Sbjct 6801 ACAAGATACGATTATTAG---CTT-ACCTCCCAAATGAGTATCTCCATTTGTTGCAAGAA 6856 Query 282240 CTTGGAAAAGTCCATCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATAT 282299 | | |||| || | |||| | ||| | | | || ||| ||||||||||| | || Sbjct 6857 CCTCAAAAACACCGTTATCAATGGTCAAGATACTGACGTCAAAAGTTCCACCACCAAGAT 6916 Query 282300 CAAAAATAAGTACATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAG 282359 | || | ||| | |||| |||| ||| | ||||| | ||| ||||||| || | Sbjct 6917 CGAAGACAAGAATATTCTTTTCACCACCTT---TCTTATCCAAACCGTACGCAATTGCTG 6973 Query 282360 CAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTT 282419 | ||||||||||||||||||||||||| |||||| | ||||||||| || ||||||| Sbjct 6974 CTGCAGTTGGTTCATTAATAATTCTCACAACATTCAAACCAGCAATCACACCAGCATCTT 7033 Query 282420 TAGTGGCTTGTCTTTGTGAATCGTTAAAATATGC 282453 | || ||||| || || | ||| || || || || Sbjct 7034 TGGTAGCTTGCCTCTGAGCATCATTGAAGTAAGC 7067 Score = 91.5 bits (100), Expect = 1e-12 Identities = 89/115 (77%), Gaps = 0/115 (0%) Strand=Plus/Plus Query 86116 AAACCGTATGCAAGAGCTGCTGCAGTTGGTTCATTAATTATTTTAAGAACATCTAAACCC 86175 |||||||| |||| ||||||||||||||||||||||| ||| | | ||||| ||||| Sbjct 6955 AAACCGTACGCAATTGCTGCTGCAGTTGGTTCATTAATAATTCTCACAACATTCAAACCA 7014 Query 86176 GCAATTTTAGCAGAATCAAGAGTTGCTTGTCTCTGTGCGTCATTAAAATATGCTG 86230 ||||| | ||| ||| || ||||| ||||| || ||||| || || |||| Sbjct 7015 GCAATCACACCAGCATCTTTGGTAGCTTGCCTCTGAGCATCATTGAAGTAAGCTG 7069 Score = 89.7 bits (98), Expect = 4e-12 Identities = 144/207 (70%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 282671 CCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAACTGCAGCTTGATATTTG 282730 ||||| | ||| || | ||||| ||||| || ||| ||||| || || | | || Sbjct 7444 CCAATAAGTCGCTTGACGTCAAAGATAGTCCTGTCTGGGTTAACAGCTGCCAGGTTCTTT 7503 Query 282731 GCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGA 282790 || || || ||||||| || | || ||||| | ||| | || || || ||||| Sbjct 7504 GCAGCTTCACCAATCAACCTCTCGGAGTCCGTAAACGCAACCCACGAAGGGGTGATGCGA 7563 Query 282791 TTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACAACTA 282850 ||||||||||| ||||||||||||||||| | ||||| | | ||||| ||||| Sbjct 7564 TTACCTTGATCGTTCGCAATAATTTCAACATGTCCATTCTTGTAAACACCAACACAGGAG 7623 Query 282851 AAAGTTGTTCCTAAATCAATACCAATA 282877 | ||||| || | ||||| || ||| Sbjct 7624 TAGGTTGTACCAAGGTCAATGCCGATA 7650 >seq121499 Length=2214 Score = 107 bits (118), Expect = 1e-17 Identities = 136/187 (73%), Gaps = 0/187 (0%) Strand=Plus/Plus Query 282341 AGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCA 282400 |||||||| | | ||||| || || ||||||||||||||||| |||| ||| || Sbjct 1539 AGACCATAAGAGAGTGCAGCGGCGGTAGGTTCATTAATAATTCTTTGCACATCAAGCCCT 1598 Query 282401 GCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACA 282460 || ||| | || ||||| || ||||||||||| || | ||| |||||||| || || ||| Sbjct 1599 GCTATTTTCCCAGCATCCTTGGTGGCTTGTCTCTGCGCATCATTAAAATAAGCTGGGACA 1658 Query 282461 GTAATAACGGCATCTGTTACTTCTTTTCCAATATAAGCGCTTGCTGTTTGTTTCATTTTA 282520 || ||||| || | |||| || |||| || || || |||| |||||| ||| Sbjct 1659 GTGATAACAGCCTTGTTTACGGACTTCCCAAGGTAGGCTTCCGCAGTTTCTTTCATCTTA 1718 Query 282521 CTTAAAA 282527 | |||| Sbjct 1719 GTCAAAA 1725 Score = 86.0 bits (94), Expect = 5e-11 Identities = 94/125 (75%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 86128 AGAGCTGCTGCAGTTGGTTCATTAATTATTTTAAGAACATCTAAACCCGCAATTTTAGCA 86187 || || || || || ||||||||||| ||| | | ||||| | || || ||||| || Sbjct 1551 AGTGCAGCGGCGGTAGGTTCATTAATAATTCTTTGCACATCAAGCCCTGCTATTTTCCCA 1610 Query 86188 GAATCAAGAGTTGCTTGTCTCTGTGCGTCATTAAAATATGCTGGTACAGTAATAACTGCT 86247 | ||| || ||||||||||| || ||||||||||| ||||| ||||| ||||| || Sbjct 1611 GCATCCTTGGTGGCTTGTCTCTGCGCATCATTAAAATAAGCTGGGACAGTGATAACAGCC 1670 Query 86248 TTATT 86252 || || Sbjct 1671 TTGTT 1675 >seq54199 Length=13578 Score = 100 bits (110), Expect = 2e-15 Identities = 145/205 (71%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 282356 GCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCA 282415 ||||| |||||||| ||||||||||| || ||| | ||| || || ||| | || ||| Sbjct 10135 GCAGCTGCAGTTGGCTCATTAATAATCCTTTGAACGTCAAGTCCTGCTATTTTCCCAGCA 10076 Query 282416 TCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCT 282475 || || |||||||||| || | ||| |||||||| || || ||||| ||||| || | Sbjct 10075 TCCTTGGTGGCTTGTCGCTGCGCATCATTAAAATAAGCTGGGACAGTGATAACTGCCTTG 10016 Query 282476 GTTACTTCTTTTCCAATATAAGCGCTTGCTGTTTGTTTCATTTTACTTAAAATCATTGAT 282535 |||| ||| |||| || || || |||| ||||| ||| | |||| | | Sbjct 10015 TTTACAGATTTCCCAAGGTAGGCTTCAGCAGTTTCCTTCATCTTAGTCAAAACAAAAGCG 9956 Query 282536 GAAATTTGTTCTGGAGAATATTGCT 282560 |||||| ||| ||||| |||| Sbjct 9955 CCAATTTGACTTGGGGAATACTGCT 9931 Score = 93.3 bits (102), Expect = 3e-13 Identities = 101/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 86128 AGAGCTGCTGCAGTTGGTTCATTAATTATTTTAAGAACATCTAAACCCGCAATTTTAGCA 86187 || || ||||||||||| |||||||| || | |||| || | || || ||||| || Sbjct 10138 AGTGCAGCTGCAGTTGGCTCATTAATAATCCTTTGAACGTCAAGTCCTGCTATTTTCCCA 10079 Query 86188 GAATCAAGAGTTGCTTGTCTCTGTGCGTCATTAAAATATGCTGGTACAGTAATAACTGCT 86247 | ||| || ||||||| ||| || ||||||||||| ||||| ||||| |||||||| Sbjct 10078 GCATCCTTGGTGGCTTGTCGCTGCGCATCATTAAAATAAGCTGGGACAGTGATAACTGCC 10019 Query 86248 TTATTAATAGGTTT 86261 || || | || ||| Sbjct 10018 TTGTTTACAGATTT 10005 >seq75701 Length=1378 Score = 95.1 bits (104), Expect = 9e-14 Identities = 176/258 (68%), Gaps = 3/258 (1%) Strand=Plus/Plus Query 282196 AAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATC 282255 |||||||| ||||||||| | ||| | ||| || || || | |||| |||| Sbjct 4 AAAATCTTTACCTCCCAAATGAGTGTCTCCATTTGTTGCAAGAACCTCAAAAACACCATT 63 Query 282256 TTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATT 282315 || | | ||| | | | |||||| ||||||||||||| ||||| | || | || Sbjct 64 ATCGATGGTCAAGATACTGACATCAAATGTTCCACCACCCAGGTCAAACACCAGAATGTT 123 Query 282316 CATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATT 282375 | | || ||| | || || || || || |||| || || |||||||||||||| Sbjct 124 CTTCTCACCCCCTT---TCTTGTCCAGCCCGTAAGCAATTGCCGCGGCAGTTGGTTCATT 180 Query 282376 AATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTG 282435 ||||| |||| ||||| || ||||| || || |||||||| || || || ||||| Sbjct 181 GATAATCCTCACCACATTCAGCCCAGCGATAACACCAGCATCTTTGGTAGCCTGCCTTTG 240 Query 282436 TGAATCGTTAAAATATGC 282453 | ||| || || || || Sbjct 241 AGCATCATTGAAGTAAGC 258 >seq105507 Length=407 Score = 93.3 bits (102), Expect = 3e-13 Identities = 137/191 (72%), Gaps = 6/191 (3%) Strand=Plus/Plus Query 282274 AACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTCTTGGTT 282333 ||||||| || ||||| || | ||||||| || | | | ||| ||| ||| || Sbjct 159 AACATCAAAAGTGCCACCTCCAAGGTCAAAAACCAGAATAGT---TTCGTTG-CTT--TT 212 Query 282334 TTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATT 282393 || |||| |||||| || || | |||||||| || ||||| ||||| | | ||| | Sbjct 213 CTTTTCAAAACCATAAGCCAACGACGCAGCAGTGGGCTCATTTATAATACGGAGAACCTC 272 Query 282394 AAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGC 282453 | ||||||||| | || ||||| || || || |||||| ||||| || || ||||| Sbjct 273 TAAACCAGCAATACGACCAGCATCCTTTGTTGCAGTTCTTTGAGAATCATTGAAGTATGC 332 Query 282454 AGGAACAGTAA 282464 |||||| |||| Sbjct 333 AGGAACCGTAA 343 >seq76578 Length=9864 Score = 86.0 bits (94), Expect = 5e-11 Identities = 137/194 (71%), Gaps = 2/194 (1%) Strand=Plus/Minus Query 435133 GAATTTTTCTTCCAAGTAATGGCTGGTCGTGAAGGTATTATTAATACAGCTATTAAAACT 435192 ||||| |||||||| | |||| |||| | |||||| ||||| |||| || | |||||| Sbjct 1968 GAATTCTTCTTCCATGCCATGGGTGGTAGAGAAGGTCTTATTGATACTGCAGTGAAAACT 1909 Query 435193 GCTGATACTGGTTATATTCAAAGAAAACTTGTCAAGATGCTTGAAGATATTAAACAAGAA 435252 |||| ||||| ||||||||||| | | || ||| | |||||||| | | Sbjct 1908 TCTGAAACTGGATATATTCAAAGGCGATTGGTGAAGGCTATGGAAGATATCATGGTTAAG 1849 Query 435253 TATGATGGTACAGTGAGAAATGCAAATGGTAAACTTATATCA-TGTGTTTATGGTGATAA 435311 |||||||| || || |||||| | || | |||| ||| | | | |||||||| | Sbjct 1848 TATGATGGGACTGTTAGAAATTCCTTAGGCGATGTTAT-TCAGTTTCTATATGGTGAAGA 1790 Query 435312 TGGTATTAATACAG 435325 |||||| || ||| Sbjct 1789 TGGTATGGATGCAG 1776 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3734641059242418