Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ocimum_20tenuiflorum_20[genbank_20GCA_5F001278415.1_202015-09-02]
121,993 sequences; 332,616,730 total letters
Query= NC_026440.1
Length=2243109
Score E
Sequences producing significant alignments: (Bits) Value
seq90120 87.8 3e-11
>seq90120
Length=6362
Score = 87.8 bits (96), Expect = 3e-11
Identities = 166/235 (71%), Gaps = 12/235 (5%)
Strand=Plus/Minus
Query 724911 ATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCC 724970
|||| |||||| || |||||||| |||||| || | | || ||| |||| |||| ||
Sbjct 2036 ATCTTCAAGGTTCTGAAGCAGGTCCACCCC-GA--CATCGGA--ATC-TCCAGCAAGGCC 1983
Query 724971 ATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCG-AGGCCGG 725029
||| |||||||||| || ||||||| || |||| || ||| | | |||| |
Sbjct 1982 ATGGGGATCATGAACAGCTTCATCAACGATATCTTCGAGAA-ATTGGCGCAGGAGGC--G 1926
Query 725030 TCGC--CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCC 725087
|||| || || |||| ||||||| || || | ||||| ||||||||||||
Sbjct 1925 TCGCGTCTCGCTCGCTACAACAAGAAGCCGACTATTACTTCTCGCGAAATCCAGACCGCC 1866
Query 725088 GTGCGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
||| | || | | | ||| || ||||| | ||||||||| || ||||| ||||
Sbjct 1865 GTGAGATTGGTTCTCCCCGGAGAGCTGGCGAAGCACGCCGTTTCTGAGGGAACCA 1811
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7166044750926866
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |