Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ocimum_20tenuiflorum_20[genbank_20GCA_5F001278415.1_202015-09-02] 121,993 sequences; 332,616,730 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq90120 87.8 3e-11 >seq90120 Length=6362 Score = 87.8 bits (96), Expect = 3e-11 Identities = 166/235 (71%), Gaps = 12/235 (5%) Strand=Plus/Minus Query 724911 ATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCC 724970 |||| |||||| || |||||||| |||||| || | | || ||| |||| |||| || Sbjct 2036 ATCTTCAAGGTTCTGAAGCAGGTCCACCCC-GA--CATCGGA--ATC-TCCAGCAAGGCC 1983 Query 724971 ATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCG-AGGCCGG 725029 ||| |||||||||| || ||||||| || |||| || ||| | | |||| | Sbjct 1982 ATGGGGATCATGAACAGCTTCATCAACGATATCTTCGAGAA-ATTGGCGCAGGAGGC--G 1926 Query 725030 TCGC--CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCC 725087 |||| || || |||| ||||||| || || | ||||| |||||||||||| Sbjct 1925 TCGCGTCTCGCTCGCTACAACAAGAAGCCGACTATTACTTCTCGCGAAATCCAGACCGCC 1866 Query 725088 GTGCGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 ||| | || | | | ||| || ||||| | ||||||||| || ||||| |||| Sbjct 1865 GTGAGATTGGTTCTCCCCGGAGAGCTGGCGAAGCACGCCGTTTCTGAGGGAACCA 1811 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7166044750926866