Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ocimum_20tenuiflorum_20[genbank_20GCA_5F001278415.1_202015-09-02] 121,993 sequences; 332,616,730 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq81039 89.7 4e-13 >seq81039 Length=11581 Score = 89.7 bits (98), Expect = 4e-13 Identities = 93/122 (76%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 41079 CAGTTTTACGTTTGCAATGGTGAACTGTCATGTCAATTGTATCAAAGATCAGGTGACATG 41138 ||||||||||| |||||||| || || || || |||||||| | || | ||| ||| Sbjct 3481 CAGTTTTACGTAGCAAATGGTGAGCTATCTTGCCAGATGTATCAACGTTCTGCTGATATG 3540 Query 41139 GGACTAGGGGTCCCGTTTAACATAGCGAGTTATGCTCTGCTCACGTATATGATTGCACAC 41198 || || || || || |||||||| || |||||||||||| || | ||||||||||| Sbjct 3541 GGTCTTGGTGTGCCATTTAACATCGCATCTTATGCTCTGCTAACATGCATGATTGCACAT 3600 Query 41199 GT 41200 || Sbjct 3601 GT 3602 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396865066517965