Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Passiflora_20edulis_20[genbank_20GCA_5F002156105.1_202017-05-22] 234,012 sequences; 165,656,733 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq88759 98.7 1e-15 seq57780 98.7 1e-15 seq228379 93.3 5e-14 seq88758 89.7 6e-13 >seq88759 Length=3029 Score = 98.7 bits (108), Expect = 1e-15 Identities = 144/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 54185 CCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCA 54244 ||||| ||||| | |||| || || | |||| | || | |||||||||| ||| ||| Sbjct 1240 CCTCCTTGATCCACATATCGTGCTGTATCATTAAACACACGTAACATTGGAACAATTCCA 1181 Query 54245 TTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGAT 54304 ||||||| |||||||| || ||||| || ||| | ||||| |||||| || || Sbjct 1180 TTGGATGTTCCATTGGTTCCACGAATATAACTGCCAGTAGCACGGATATTATGAACAGAA 1121 Query 54305 AGACCTATCCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATG 54364 | ||| || || || || ||| ||| | || || || || |||||||| || Sbjct 1120 ACACCAATTCCTCCAGCAGATTTGCTGATAACAGCACACTCCTTCAAGGTATCATATATT 1061 Query 54365 CCCTCTATACTATCATCCATCATG 54388 || || ||||||||||| ||||| Sbjct 1060 CCTTCAATACTATCATCTTTCATG 1037 Score = 91.5 bits (100), Expect = 2e-13 Identities = 139/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 54424 AGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATT 54483 |||||| |||||||||| ||||||||||| || || |||||| | ||| | ||||| Sbjct 889 AGTTCCAGCATTAAATAGAGTAGGAGAAGCATGAGTGAACCATCGCTGAGACATTAGATG 830 Query 54484 GTACGTCTCGATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAA 54543 || || | ||| | || || ||||| || |||||||| || || || | ||| | Sbjct 829 ATATGTTTTAATAACCGAATCAATATCATCTTTGTGAATTCCAACAGCAACCCTCATCAG 770 Query 54544 CATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAGCAAGTAGGATTTTTCCAA 54603 |||||| |||||||| || || | || | | ||||| | |||||| ||| | Sbjct 769 CATGTGTTGAGGTCTCTCTACAACTTTTCCCTGAACCTTCAGTAGGTAGGACCGTTCAAG 710 Query 54604 AGTTTTAAAACCAAAATA 54621 ||||| || ||||| || Sbjct 709 GGTTTTGAACCCAAAGTA 692 >seq57780 Length=6884 Score = 98.7 bits (108), Expect = 1e-15 Identities = 155/222 (70%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 54184 TCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACC 54243 |||||| ||||| | || | ||| ||||||||| | |||| | ||| || | ||| || Sbjct 1210 TCCTCCTTGATCAACATAACGAGCAGTGTTATTAAACACTCGAAGCATGGGGACAATGCC 1151 Query 54244 ATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGA 54303 || || | ||||| || || ||||| || ||| ||||||| ||||| || || Sbjct 1150 ATGTGAAGTCCCATTTGTACCACCAATATAACTGCCAGTGGCACGGATATTGTGGATGGA 1091 Query 54304 TAGACCTATCCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGAT 54363 |||||||| || || || ||| || | || ||| | || ||||||||||| Sbjct 1090 AAGACCTATTCCTCCGGCTGATTTGCTTATAACAGCACATTCCCTCAAAGTATCATAGAT 1031 Query 54364 GCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCT 54405 || || ||||||||||| ||||| || |||||||| || Sbjct 1030 TCCTTCAATACTATCATCTTTCATGCACAGGAGAAAACAACT 989 Score = 84.2 bits (92), Expect = 3e-11 Identities = 127/171 (74%), Gaps = 10/171 (6%) Strand=Plus/Minus Query 53928 TTTCGTATAGTGTATACAATCGTTCAAACTCGTCTCCCCAAACATTGT-CCAATCCAGGA 53986 |||| || || ||||||| | ||||||| || ||||| || | | |||| |||||| Sbjct 1727 TTTCATAGAGCGTATACAGTTTGTCAAACTGTTCACCCCAG-CAGTCTGCCAAACCAGGA 1669 Query 53987 CATTCATCCGGACACATCAACGACCACTCTCCGTCATC-CTTC--ACTCGTTTCATAAAG 54043 |||| || || | ||| ||||| ||||| |||| |||| |||| || ||||||| Sbjct 1668 GCATCATTGGGGCAAAACAAAGACCA-TCTCC--CATCACTTCGAACTCTTTCCATAAAG 1612 Query 54044 AGATCAGGAATCCAAAGAGCTATA-AATAGATCTCTGGTTCTATGTTCCTC 54093 ||||| |||||||||||||| ||| |||| ||| | | | |||||| || Sbjct 1611 AGATCGGGAATCCAAAGAGC-ATAGAATAAATCCCGAGCCCGATGTTCTTC 1562 >seq228379 Length=361 Score = 93.3 bits (102), Expect = 5e-14 Identities = 195/291 (67%), Gaps = 0/291 (0%) Strand=Plus/Minus Query 24420 AGACTATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTA 24479 || || ||||| || || || ||||| || ||||| || || || || || ||| | Sbjct 315 AGGCTGTACATCTCGGAGTGGATGTTCTCGATGGCGATCTGGAAGCCATAAAAAGCACGC 256 Query 24480 GCCTCGGTAATCTGTACTTCTATACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCG 24539 ||||| | | ||| || || | || | | |||| |||||| || |||||| Sbjct 255 GCCTCCGCCACCTGAACCTCCTTCATGAAGCTGCCGGCTAGGTTTTCAAGAACGATTCCG 196 Query 24540 TCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGT 24599 || ||| || || || |||| ||||| || |||| || |||||||||||||| Sbjct 195 TCGGAGGCGGCGAAGAAGGCCAGCACATGAGAAATGAAATGCTTCTCGTCTGGTGTTAGC 136 Query 24600 TTATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCC 24659 | ||| | | || ||| | || | |||||| || || ||||||| || || ||| Sbjct 135 GCTTCCCAGTGACGGAGATCCTGGGAGAGATCCACCTCCTCGGCTGTCCAGAAGGAGGCC 76 Query 24660 TCTGCCTTTTTATACATATTCCAGATGTCATGATATTGAATTGGAAAAATA 24710 ||||| || || ||||| | ||| || || | || || || || || ||| Sbjct 75 TCTGCTTTCTTGTACATTTCCCAAATCTCGGGGTACTGGATCGGGAACATA 25 >seq88758 Length=3554 Score = 89.7 bits (98), Expect = 6e-13 Identities = 142/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 54185 CCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCA 54244 ||||| ||||| | || | || |||| ||| | || | |||||||||| ||| ||| Sbjct 1351 CCTCCTTGATCAACATAACGTGCTGTGTCATTGAACACACGTAACATTGGAACAATGCCA 1292 Query 54245 TTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGAT 54304 ||||||| || || || || ||||| || || ||||||| |||||| || ||| Sbjct 1291 TTGGATGTTCCGTTAGTTCCACGAATATAACTGCCCGTGGCACGGATATTATGAACTGAA 1232 Query 54305 AGACCTATCCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATG 54364 | ||| || || || || ||| ||| | || || || || |||||||| || Sbjct 1231 ACACCAATTCCTCCAGCTGATTTGCTGATAACGGCACACTCCTTCAAGGTATCATATATA 1172 Query 54365 CCCTCTATACTATCATCCATCATG 54388 || || ||||||||||| ||||| Sbjct 1171 CCATCGATACTATCATCTTTCATG 1148 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 591984875261760