Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Passiflora_20edulis_20[genbank_20GCA_5F002156105.1_202017-05-22] 234,012 sequences; 165,656,733 total letters Query= NC_001875.2 Length=131995 Score E Sequences producing significant alignments: (Bits) Value seq76495 141 8e-29 seq128449 131 1e-25 seq143273 113 4e-20 seq215049 102 7e-17 seq18136 93.3 4e-14 seq1027 93.3 4e-14 seq105808 89.7 4e-13 >seq76495 Length=1287 Score = 141 bits (156), Expect = 8e-29 Identities = 159/213 (75%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 20964 AGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCC 21023 || || | ||||| ||||||||||||||| ||||| |||||||||| ||| | | ||| Sbjct 637 AGGACAAGATGCAGAGTGGACTCCTTTTGGATGTTGTAGTCCGCCAAGGTACGCCCATCC 578 Query 21024 TCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCG 21083 |||||||| || || ||| | || | ||||||||||| ||| | |||||||||||| Sbjct 577 TCCAGCTGCTTACCAGCAAAGATCAACCTCTGCTGGTCTGGGGGAATGCCTTCCTTGTCT 518 Query 21084 GCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTC 21143 ||| || |||||| | | | ||||||| | |||| |||| ||||||||| Sbjct 517 TGGATTTTAGCTTTCACATTATCAATAGTATCAGAGCTCTCCACCTCCAAGGTAATGGTT 458 Query 21144 TTGCCGGTTAACGTTTTGACAAATATTTGCATT 21176 || || || | ||| || |||||||| |||||| Sbjct 457 TTCCCAGTCAGCGTCTTAACAAATATCTGCATT 425 >seq128449 Length=764 Score = 131 bits (144), Expect = 1e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || || | |||||||| ||||||||| || |||||||| ||||||||||| || Sbjct 428 CCACCACGGAGACGGAGCACCAAATGCAAAGTAGATTCCTTTTGGATGTTATAGTCAGCA 369 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 ||||| | | ||||| ||||| ||||| ||| |||| || ||||||||||| || Sbjct 368 AGGGTGCGCCCATCCTCTAGCTGCTTGCCAGCAAAAATTAGCCTCTGCTGGTCTGGTGGG 309 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||| ||||| || ||||| ||||| | | | || ||| |||| Sbjct 308 ATGCCCTCCTTATCTTGAATCTTGGCCTTCACATTATCAATGGTGTCAGAACTCTCCACC 249 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 |||| ||| ||||||||||| || | ||||| ||||| |||||||| Sbjct 248 TCCAAGGTGATGGTCTTGCCTGTGAGAGTTTTCACAAAAATTTGCAT 202 Score = 98.7 bits (108), Expect = 8e-16 Identities = 102/134 (76%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || ||||||||||||| || | |||||| |||||||| || || || || || Sbjct 200 CCACCACGGAGCCTGAGCACCAAGTGGAGAGTGGATTCCTTTTGGATATTGTAATCAGCA 141 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 ||||| || | ||||| || || ||||| ||| |||| || |||||||||||| || Sbjct 140 AGGGTACGGCCATCCTCTAGTTGCTTGCCAGCAAAAATGAGCCTCTGCTGGTCCGGTGGG 81 Query 21069 ACGCCTTCCTTGTC 21082 | |||||||| || Sbjct 80 ATTCCTTCCTTATC 67 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || ||||| | ||||||| || | || ||||||||||||||||| ||||| ||| Sbjct 656 CCACCACGCAGGCGAAGCACCAAGTGGAGTGTAGACTCCTTTTGAATGTTGTAGTCGGCC 597 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 | || | || || ||||| ||||| ||| | || || || |||||||| || Sbjct 596 AATGTCCTTCCATCTTCAAGCTGCTTGCCGGCAAATATCAGCCTTTGCTGGTCAGGTGGG 537 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||||||||||| ||||| || || | | ||| || ||| | || | Sbjct 536 ATTCCTTCCTTGTCCTGTATCTTCGCCTTAACATTGTCGATTGTGTCAGAGCTTTCTACT 477 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 |||| || || ||||| ||||| | || || ||||| || ||||| Sbjct 476 TCCAAAGTGATTGTCTTTCCGGTCAGTGTCTTCACAAAAATCTGCAT 430 >seq143273 Length=304 Score = 113 bits (124), Expect = 4e-20 Identities = 155/215 (72%), Gaps = 4/215 (2%) Strand=Plus/Minus Query 20964 AGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCC 21023 || || | ||||| ||||||||||||||| ||||||||||| |||||||| | | ||| Sbjct 297 AGGACAAGATGCAGAGTGGACTCCTTTTGGATGTTATAGTCTGCCAGGGTACGTCCATCC 238 Query 21024 TCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCG 21083 || ||||| || || || | || ||||| ||||||||| ||| | ||||||||||| Sbjct 237 TCTAGCTGCTTACCAGCGAAGATCAGTCTTTGCTGGTCCGGGGGAATACCTTCCTTGTCT 178 Query 21084 GCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGC--TCCGTTTCCACGGTAATGG 21141 ||| || ||||| | | | ||||| ||| || || |||| ||||||| Sbjct 177 TGGATTTTGGCCTTCACATTATCAATAGTAT--CCGAGCTTTCAACCTCCAACGTAATGG 120 Query 21142 TCTTGCCGGTTAACGTTTTGACAAATATTTGCATT 21176 | || || || | || || ||||| || |||||| Sbjct 119 TTTTACCAGTCAGAGTCTTCACAAAGATCTGCATT 85 >seq215049 Length=488 Score = 102 bits (112), Expect = 7e-17 Identities = 103/134 (77%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || ||||| || | ||||||| || | |||||||||||| || ||||| ||||| ||| Sbjct 327 CCACCTCGGAGTCGAAGCACCAAGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGCC 386 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 | ||| | ||||||||||||| || || || | || || |||||||||||| ||| Sbjct 387 AAGGTCCTGCCGTCCTCCAGCTGCTTTCCGGCGAAGATCAGCCTCTGCTGGTCCGGGGGA 446 Query 21069 ACGCCTTCCTTGTC 21082 | ||||||||||| Sbjct 447 ATTCCTTCCTTGTC 460 >seq18136 Length=774 Score = 93.3 bits (102), Expect = 4e-14 Identities = 102/136 (75%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 20947 TTCCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCG 21006 |||| || | ||||| | |||| ||| | || ||||| || || ||||| ||||| | Sbjct 659 TTCCTCCCCTAAGCCTCAAAACCAGATGAAGTGTTGACTCTTTCTGGATGTTGTAGTCAG 600 Query 21007 CCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGG 21066 | || ||| || | ||||||||||| ||||| || |||| |||||||||||||| | Sbjct 599 CGAGAGTTCGGCCATCCTCCAGCTGCTTGCCGGCGAAAATCAGTCTCTGCTGGTCTGGAG 540 Query 21067 GCACGCCTTCCTTGTC 21082 | | ||||||||||| Sbjct 539 GGATTCCTTCCTTGTC 524 >seq1027 Length=13177 Score = 93.3 bits (102), Expect = 4e-14 Identities = 102/136 (75%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 20947 TTCCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCG 21006 |||| || | |||||| | |||| ||| | || |||||||| || ||||||||||| | Sbjct 4811 TTCCTCCCCTCAGCCTCAAAACCAGATGAAGTGTAGACTCCTTCTGGATGTTATAGTCAG 4870 Query 21007 CCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGG 21066 | |||||| || | ||||||| || ||||| || |||| | |||||| |||||| | Sbjct 4871 CAAGGGTTCGGCCATCCTCCAATTGCTTGCCAGCGAAAATCAATCTCTGTTGGTCCGGCG 4930 Query 21067 GCACGCCTTCCTTGTC 21082 | | |||||||| || Sbjct 4931 GGATACCTTCCTTATC 4946 >seq105808 Length=219 Score = 89.7 bits (98), Expect = 4e-13 Identities = 88/114 (77%), Gaps = 0/114 (0%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || || | |||||||| ||| | ||||||||||| |||||||||||||| || Sbjct 106 CCACCACGGAGACGGAGCACCAAATGGAGGGTGGACTCCTTCTGAATGTTATAGTCAGCA 165 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCC 21062 ||||| || | ||||| ||||| || || ||| | || | || ||||||||| Sbjct 166 AGGGTGCGGCCATCCTCTAGCTGCTTTCCGGCAAAGATCAACCTTTGCTGGTCC 219 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421054907788592