Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Passiflora_20edulis_20[genbank_20GCA_5F002156105.1_202017-05-22] 234,012 sequences; 165,656,733 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq228379 185 9e-42 seq143273 104 2e-17 seq128449 104 2e-17 seq76495 100 3e-16 seq215049 95.1 1e-14 seq18136 89.7 5e-13 seq87537 82.4 8e-11 >seq228379 Length=361 Score = 185 bits (204), Expect = 9e-42 Identities = 230/309 (74%), Gaps = 6/309 (2%) Strand=Plus/Plus Query 116590 CGAGAACCCCCGCCGGTTCGTGATTTTCCCCATACAATACCCGGACATGTGGCGCATGTA 116649 ||||||||| ||||||| || ||||| || || ||||| || || ||| ||||| Sbjct 4 CGAGAACCCTGACCGGTTCTGTATGTTCCCGATCCAGTACCCCGAGATTTGGGAAATGTA 63 Query 116650 CAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTGTCCAAGGACACGAG 116709 ||| || || ||||| || |||||||| | |||||||||||| || ||| |||| | Sbjct 64 CAAGAAAGCAGAGGCCTCCTTCTGGACAGCCGAGGAGGTGGATCTCTCCCAGGATCTCCG 123 Query 116710 CGACTGGGA-GCGCTTGAACGACA-ACGAGCGCCATTTCATCAAGCACGTGCTGGCCTTT 116767 ||||||| ||||| ||| || ||||| |||||||| || ||||||||||| Sbjct 124 TCACTGGGAAGCGCT--AACACCAGACGAGAAGCATTTCATTTCTCATGTGCTGGCCTTC 181 Query 116768 TTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGTTTCGCTCAGGAGGTG 116827 ||||||||| |||||| ||||| || || || | || | ||| ||||||| Sbjct 182 TTCGCCGCCTCCGACGGAATCGTTCTTGAAAACCTAGCCGGCAGCTTCATGAAGGAGGTT 241 Query 116828 CAGGTGGCCGAGGCGCGGTGC-TTCTACGGCTTTCAGATCGCCATGGAGAACGTGCACTC 116886 |||||||| ||||||| |||| || || ||||| ||||||||||| |||||| | ||||| Sbjct 242 CAGGTGGCGGAGGCGC-GTGCTTTTTATGGCTTCCAGATCGCCATCGAGAACATCCACTC 300 Query 116887 GGAAATGTA 116895 || ||||| Sbjct 301 CGAGATGTA 309 >seq143273 Length=304 Score = 104 bits (114), Expect = 2e-17 Identities = 149/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 40689 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCAC 40748 |||||| || || || || || || || || |||||||| || | || || ||| | | Sbjct 85 AATGCAGATCTTTGTGAAGACTCTGACTGGTAAAACCATTACGTTGGAGGTTGAAAGCTC 144 Query 40749 CGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 || | | | | | |||| ||||| | ||||| || || || ||| ||||||| Sbjct 145 GGATACTATTGATAATGTGAAGGCCAAAATCCAAGACAAGGAAGGTATTCCCCCGGACCA 204 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 |||| |||| |||| ||| || || ||||| || || | || ||||| ||||| || Sbjct 205 GCAAAGACTGATCTTCGCTGGTAAGCAGCTAGAGGATGGACGTACCCTGGCAGACTATAA 264 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 |||||| |||||| |||| |||||||| || Sbjct 265 CATCCAAAAGGAGTCCACTCTGCATCTTGT 294 >seq128449 Length=764 Score = 104 bits (114), Expect = 2e-17 Identities = 149/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| || || ||||| ||||| ||||| ||||||||| | || || || | Sbjct 202 ATGCAAATTTTTGTGAAAACTCTCACAGGCAAGACCATCACCTTGGAGGTGGAGAGTTCT 261 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | | |||| || |||| || || ||||||||||| | |||||| Sbjct 262 GACACCATTGATAATGTGAAGGCCAAGATTCAAGATAAGGAGGGCATCCCACCAGACCAG 321 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || | || || | || ||||| ||||| || || | ||||||||| ||||| ||| Sbjct 322 CAGAGGCTAATTTTTGCTGGCAAGCAGCTAGAGGATGGGCGCACCCTTGCTGACTATAAC 381 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTG 40899 ||||| ||||| | || ||||| | ||| Sbjct 382 ATCCAAAAGGAATCTACTTTGCATTTGGTG 411 >seq76495 Length=1287 Score = 100 bits (110), Expect = 3e-16 Identities = 148/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 40689 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCAC 40748 |||||| ||||| || || ||||| || || |||||||| ||| | || || || | | Sbjct 425 AATGCAGATATTTGTTAAGACGCTGACTGGGAAAACCATTACCTTGGAGGTGGAGAGCTC 484 Query 40749 CGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 || | | | | | || | ||||| | ||||| || ||||| ||| | ||||| Sbjct 485 TGATACTATTGATAATGTGAAAGCTAAAATCCAAGACAAGGAAGGCATTCCCCCAGACCA 544 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| | | |||| || || || |||||||| || | ||| ||| | |||||||| Sbjct 545 GCAGAGGTTGATCTTTGCTGGTAAGCAGCTGGAGGATGGGCGTACCTTGGCGGACTACAA 604 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 |||||| |||||| |||| |||||||| || Sbjct 605 CATCCAAAAGGAGTCCACTCTGCATCTTGT 634 >seq215049 Length=488 Score = 95.1 bits (104), Expect = 1e-14 Identities = 101/132 (77%), Gaps = 1/132 (1%) Strand=Plus/Minus Query 40761 AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCAT 40820 |||| |||||| || |||| ||||| || || || ||| |||||||||| | || || Sbjct 481 AACG-TCAAGGCCAAGATTCAAGACAAGGAAGGAATTCCCCCGGACCAGCAGAGGCTGAT 423 Query 40821 CTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGA 40880 || ||| || || |||||||| |||| | ||| | ||||||||||||||||||||| Sbjct 422 CTTCGCCGGAAAGCAGCTGGAGGACGGCAGGACCTTGGCCGACTACAACATCCAGAAGGA 363 Query 40881 GGCCACGCTGCA 40892 | |||| || || Sbjct 362 GTCCACTCTCCA 351 >seq18136 Length=774 Score = 89.7 bits (98), Expect = 5e-13 Identities = 100/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 40783 GACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGAC 40842 ||||| || || ||||| | |||||||| |||| || | ||| ||||| |||||||| Sbjct 524 GACAAGGAAGGAATCCCTCCAGACCAGCAGAGACTGATTTTCGCCGGCAAGCAGCTGGAG 583 Query 40843 GACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTG 40902 || | || || ||| ||||||||||||||||| ||| | || || ||||| || ||| Sbjct 584 GATGGCCGAACTCTCGCTGACTACAACATCCAGAAAGAGTCAACACTTCATCTGGTTTTG 643 Query 40903 CGCTTGAGGGGCGG 40916 | | ||||| || Sbjct 644 AGGCTTAGGGGAGG 657 >seq87537 Length=233 Score = 82.4 bits (90), Expect = 8e-11 Identities = 135/195 (69%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 40684 CGAAAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAA 40743 ||| | ||||| || || || ||||| || ||||| || |||||||| | || || || Sbjct 39 CGACAGATGCAGATCTTTGTGAAAACTCTAACGGGAAAGACCATCACTCTAGAGGTGGAG 98 Query 40744 GCCACCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCG 40803 | |||| | | | | | | || | || || | || || || || ||||| || Sbjct 99 AGCTCCGATACCATTGATAATGTTAAAGCCAAGATCCAGGATAAGGAAGGGATCCCGCCG 158 Query 40804 GACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGAC 40863 ||||||||| | || |||| || || || |||||||| || | ||| || || ||| Sbjct 159 GACCAGCAAAGGCTGATCTTTGCAGGGAAGCAGCTGGAAGATGGGCGTACTCTTGCGGAC 218 Query 40864 TACAACATCCAGAAG 40878 || |||||||||||| Sbjct 219 TATAACATCCAGAAG 233 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 513712106557120