Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Passiflora_20edulis_20[genbank_20GCA_5F002156105.1_202017-05-22] 234,012 sequences; 165,656,733 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq128449 98.7 1e-15 seq143273 96.9 4e-15 seq76495 96.9 4e-15 >seq128449 Length=764 Score = 98.7 bits (108), Expect = 1e-15 Identities = 156/220 (71%), Gaps = 8/220 (4%) Strand=Plus/Minus Query 42968 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 43027 ||| | |||||||||||| || |||||||| || || || ||||| || || ||| | Sbjct 417 ACGGAGCACCAAATGCAAAGTAGATTCCTTTTGGATGTTATAGTCAGCAAGGGTGCGCCC 358 Query 43028 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTT 43087 || ||||||||||| ||||| || || || | ||||||||| | || | || |||||| Sbjct 357 ATCCTCTAGCTGCTTGCCAGCAAAAATTAGCCTCTGCTGGTCTGGTGGGATGCCCTCCTT 298 Query 43088 GTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTC---GCTCGATTCCACATCGACCG 43143 | | ||| | || | || | | | | ||||| ||| ||||| || | | Sbjct 297 AT-CTTGAATCTTGGCCTTCACATTATCAATGGTGTCAGAACTC---TCCACCTCCAAGG 242 Query 43144 TGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 ||||||| ||||| || || || || ||||| |||||||| Sbjct 241 TGATGGTCTTGCCTGTGAGAGTTTTCACAAAAATTTGCAT 202 Score = 82.4 bits (90), Expect = 9e-11 Identities = 95/127 (75%), Gaps = 1/127 (1%) Strand=Plus/Minus Query 42974 CACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATC 43033 |||||| || | ||| |||||||| |||||||||||||| || || || | || || Sbjct 183 CACCAAGTGGAGAGTGGATTCCTTTTGGATATTGTAATCAGCAAGGGTACGGCCATCCTC 124 Query 43034 TAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 43093 ||| ||||| ||||| || ||||| | ||||||||| | || | | ||||| ||| | Sbjct 123 TAGTTGCTTGCCAGCAAAAATGAGCCTCTGCTGGTCCGGTGGGATTCCTTCCTTATCC-T 65 Query 43094 GATTTTT 43100 || |||| Sbjct 64 GAATTTT 58 >seq143273 Length=304 Score = 96.9 bits (106), Expect = 4e-15 Identities = 147/208 (71%), Gaps = 6/208 (3%) Strand=Plus/Minus Query 42980 ATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTG 43039 ||||| ||| ||||||||| || || || || ||||| || || | || |||||||| Sbjct 289 ATGCAGAGTGGACTCCTTTTGGATGTTATAGTCTGCCAGGGTACGTCCATCCTCTAGCTG 230 Query 43040 CTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTT 43099 |||||||||||| || |||| |||||||| | || | | |||||||| |||||| Sbjct 229 CTTACCAGCGAAGATCAGTCTTTGCTGGTCCGGGGGAATACCTTCCTTGTCTTGGATTTT 170 Query 43100 TTGTTTGAGCGTCGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCC 43156 || | | | | || || ||| ||| || || | ||| |||||||| || Sbjct 169 GGCCTTCACATTATCAATAGTATCCGAGCT---TTCAACCTCCAACGTAATGGTTTTACC 113 Query 43157 CGTTAGCGTCTTTACAAAGATTTGCATT 43184 || || ||||| |||||||| |||||| Sbjct 112 AGTCAGAGTCTTCACAAAGATCTGCATT 85 >seq76495 Length=1287 Score = 96.9 bits (106), Expect = 4e-15 Identities = 147/208 (71%), Gaps = 6/208 (3%) Strand=Plus/Minus Query 42980 ATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTG 43039 ||||| ||| ||||||||| || ||||| || |||| || ||| | || || ||||| Sbjct 629 ATGCAGAGTGGACTCCTTTTGGATGTTGTAGTCCGCCAAGGTACGCCCATCCTCCAGCTG 570 Query 43040 CTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTT 43099 ||||||||| || || | | ||||||||| | || | || |||||||| |||||| Sbjct 569 CTTACCAGCAAAGATCAACCTCTGCTGGTCTGGGGGAATGCCTTCCTTGTCTTGGATTTT 510 Query 43100 TTGTTTGAGCGTCGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCC 43156 ||| | | | | || || |||| ||||| || | || |||||||| || Sbjct 509 AGCTTTCACATTATCAATAGTATCAGAGCTC---TCCACCTCCAAGGTAATGGTTTTCCC 453 Query 43157 CGTTAGCGTCTTTACAAAGATTTGCATT 43184 || |||||||| ||||| || |||||| Sbjct 452 AGTCAGCGTCTTAACAAATATCTGCATT 425 Score = 91.5 bits (100), Expect = 2e-13 Identities = 159/230 (69%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 42956 TCCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 43015 |||||| | | |||||||||||| || | | || ||||||||| ||||| || | Sbjct 425 TCCTCCACGCAGACGCAACACCAAGTGAAGGGATGACTTCTTTTGAATGTTGTAGTCGAC 366 Query 43016 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGG 43075 ||||||| | || || || ||||| ||||| || || | | ||||||||| | || Sbjct 365 AAGAGTCCTACCATCTTCAAGTTGCTTCCCAGCAAAAATCAACCTCTGCTGGTCTGGTGG 306 Query 43076 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTC---GCTCGATTC 43132 | || ||||||||| || ||| || | | | | ||||| |||| || Sbjct 305 GATGCCTTCCTTGTCCTGTATCTTTGCCTTCACATTGTCAATGGTGTCGGAGCTC---TC 249 Query 43133 CACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCA 43182 || || | ||||||||||| ||||| || ||||| ||||| ||||||| Sbjct 248 AACCTCCAAAGTGATGGTTTTTCCCGTGAGAGTCTTGACAAAAATTTGCA 199 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570144947747360