Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Passiflora_20edulis_20[genbank_20GCA_5F002156105.1_202017-05-22] 234,012 sequences; 165,656,733 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq128449 100 3e-16 seq76495 95.1 1e-14 seq88758 89.7 5e-13 seq143273 82.4 7e-11 >seq128449 Length=764 Score = 100 bits (110), Expect = 3e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| ||||| || ||||| ||||| || || || ||||| | || || ||| || Sbjct 429 CATGCAGATTTTTGTGAAGACACTGACCGGAAAGACAATCACTTTGGAAGTAGAAAGCTC 488 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 |||| |||| | || || || ||| |||||||||||| | || || ||||| Sbjct 489 TGACACAATCGACAATGTTAAGGCGAAGATACAGGACAAGGAAGGAATCCCACCTGACCA 548 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 ||| | || ||||| || ||||| ||| | ||||| | ||| || ||| || || Sbjct 549 GCAAAGGCTGATATTTGCCGGCAAGCAGCTTGAAGATGGAAGGACATTGGCCGACTACAA 608 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419 ||||||||| || || || || || |||| ||| | ||| | || || Sbjct 609 CATTCAAAAGGAGTCTACACTCCACTTGGTGCTTCGCCTGCGTGGTGG 656 >seq76495 Length=1287 Score = 95.1 bits (104), Expect = 1e-14 Identities = 148/209 (71%), Gaps = 2/209 (1%) Strand=Plus/Plus Query 31194 TGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCG 31253 |||||||||| || |||||||| || || ||||| ||||| | || ||||| |||| Sbjct 199 TGCAAATTTTTGTCAAGACTCTCACGGGAAAAACCATCACTTTGGAGGTTGAGAGCTCCG 258 Query 31254 ACAGTGTCGAAACGGTCAAA-CAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 ||| | || | || || || ||| || ||||||||||||| | || || |||||| Sbjct 259 ACACCATTGACAATGTGAAGGCAAAGA-TACAGGACAAGGAAGGCATCCCACCAGACCAG 317 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||| | | || || ||||| || || | ||||| || |||| | ||| || ||| Sbjct 318 CAGAGGTTGATTTTTGCTGGGAAGCAACTTGAAGATGGTAGGACTCTTGTCGACTACAAC 377 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGT 31401 |||||||| | || | ||||| |||| Sbjct 378 ATTCAAAAGAAGTCATCCCTTCACTTGGT 406 >seq88758 Length=3554 Score = 89.7 bits (98), Expect = 5e-13 Identities = 128/176 (73%), Gaps = 7/176 (4%) Strand=Plus/Minus Query 22492 GTAAATGTTGGATGTGAACGGTTCGAAAGATTCATTGTTTCCCAGTATCTGAGCGGTCGA 22551 ||| |||||||| || | || || ||| | ||||||||||| || ||||| ||| || Sbjct 3153 GTAGATGTTGGAAGTATATGGCTCAAAACACTCATTGTTTCCAAGAATCTGGCTGGTGGA 3094 Query 22552 AGCGGTCGGCATCGGCGCCAACAGTAGCGAGTTTCTCAAGCCGTGCTTTGAAATT-TTAC 22610 || || ||||| || |||| || ||||| ||||||| |||| ||| || ||| || | Sbjct 3093 TGCAGTTGGCATTGGTGCCACAAGAAGCGAATTTCTCACCCCGTTCTTGGATATTGTTTC 3034 Query 22611 TCT-TGAGCATCGACCAGTCCCACAGATCGGACGGCGTCACATTGTCCCACATATC 22665 ||| ||||||| ||| | |||| | || || |||||| |||||||| || Sbjct 3033 TCTAAGAGCATC--CCAATTCCACCTACTTGAAGGAGTCACA---TCCCACATGTC 2983 >seq143273 Length=304 Score = 82.4 bits (90), Expect = 7e-11 Identities = 148/214 (69%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || || || ||||||||||| || ||||| || || | || |||||| || Sbjct 86 ATGCAGATCTTTGTGAAGACTCTGACTGGTAAAACCATTACGTTGGAGGTTGAAAGCTCG 145 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 || | | | || | || || | ||| ||||||||||| | || || |||||| Sbjct 146 GATACTATTGATAATGTGAAGGCCAAAATCCAAGACAAGGAAGGTATTCCCCCGGACCAG 205 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATG-ACTATGAGCGATTATAA 31371 || | || || |||||||| || ||| | || || | | | || || || ||||| Sbjct 206 CAAAGACTGATCTTCGCTGGTAAGCAGCTAGAGGA-TGGACGTACCCTGGCAGACTATAA 264 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTT 31405 ||| ||||| || || ||||| ||||| || ||| Sbjct 265 CATCCAAAAGGAGTCCACTCTGCATCTTGTCCTT 298 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 444462466415040