Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Passiflora_20edulis_20[genbank_20GCA_5F002156105.1_202017-05-22] 234,012 sequences; 165,656,733 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq228379 102 1e-16 seq88759 100 4e-16 seq57780 98.7 1e-15 >seq228379 Length=361 Score = 102 bits (112), Expect = 1e-16 Identities = 197/291 (68%), Gaps = 0/291 (0%) Strand=Plus/Minus Query 33867 AGACTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTA 33926 || || ||||| || || || ||||| || ||||| ||||| || || || ||| | Sbjct 315 AGGCTGTACATCTCGGAGTGGATGTTCTCGATGGCGATCTGGAAGCCATAAAAAGCACGC 256 Query 33927 GCCTCGGTAATCTGCACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCA 33986 ||||| | | ||| || || | || | | |||| |||||| || ||||| Sbjct 255 GCCTCCGCCACCTGAACCTCCTTCATGAAGCTGCCGGCTAGGTTTTCAAGAACGATTCCG 196 Query 33987 TCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGT 34046 || ||| || || || |||| ||||| || |||| || |||||||||||||| Sbjct 195 TCGGAGGCGGCGAAGAAGGCCAGCACATGAGAAATGAAATGCTTCTCGTCTGGTGTTAGC 136 Query 34047 TTATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCC 34106 | ||| | | || ||| | || | |||||| || || ||||||| || || ||| Sbjct 135 GCTTCCCAGTGACGGAGATCCTGGGAGAGATCCACCTCCTCGGCTGTCCAGAAGGAGGCC 76 Query 34107 TCTGCCTTTTTATACATATTCCAGATGTCATGATATTGGATTGGGAAAATA 34157 ||||| || || ||||| | ||| || || | || ||||| ||||| ||| Sbjct 75 TCTGCTTTCTTGTACATTTCCCAAATCTCGGGGTACTGGATCGGGAACATA 25 >seq88759 Length=3029 Score = 100 bits (110), Expect = 4e-16 Identities = 141/198 (71%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 63662 AGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATT 63721 |||||| |||||||||| ||||||||||| || || |||||| | ||| | ||||| Sbjct 889 AGTTCCAGCATTAAATAGAGTAGGAGAAGCATGAGTGAACCATCGCTGAGACATTAGATG 830 Query 63722 GTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAA 63781 || || | |||| | || || ||||| || |||||||| || || || | ||| | Sbjct 829 ATATGTTTTAATAACCGAATCAATATCATCTTTGTGAATTCCAACAGCAACCCTCATCAG 770 Query 63782 CATGTGCTGAGGTCTTTCAACAATTTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAA 63841 |||||| |||||||| || |||| ||| | | |||| | |||||| ||| | Sbjct 769 CATGTGTTGAGGTCTCTCTACAACTTTTCCCTGAACCTTCAGTAGGTAGGACCGTTCAAG 710 Query 63842 AGTTTTAAAACCAAAATA 63859 ||||| || ||||| || Sbjct 709 GGTTTTGAACCCAAAGTA 692 >seq57780 Length=6884 Score = 98.7 bits (108), Expect = 1e-15 Identities = 155/222 (70%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 63422 TCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACC 63481 |||||| ||||| | || | ||| ||||||||| | |||| | ||| || | ||| || Sbjct 1210 TCCTCCTTGATCAACATAACGAGCAGTGTTATTAAACACTCGAAGCATGGGGACAATGCC 1151 Query 63482 GTTTGATATACCATTGGTACCGGAGATATAGCCTCCACTGGCACGAATATTACTAATTGA 63541 | ||| | ||||| ||||| ||||| | ||| ||||||| ||||| || || Sbjct 1150 ATGTGAAGTCCCATTTGTACCACCAATATAACTGCCAGTGGCACGGATATTGTGGATGGA 1091 Query 63542 TAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGAT 63601 ||||||||||| || || ||| || | || ||| | || || |||||||| Sbjct 1090 AAGACCTATTCCTCCGGCTGATTTGCTTATAACAGCACATTCCCTCAAAGTATCATAGAT 1031 Query 63602 GCCTTCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCT 63643 ||||| || |||||||| ||||| || |||||||| || Sbjct 1030 TCCTTCAATACTATCATCTTTCATGCACAGGAGAAAACAACT 989 Score = 86.0 bits (94), Expect = 8e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 63650 TTGGTGACGAGTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTC 63709 |||| | ||| |||||| || || || | |||||| | || || || ||||| || Sbjct 881 TTGGGGCTGAGGAGTTCCTGCGTTGAAAAGGGTAGGTGTGGCATGAGTGAACCAGCGTTG 822 Query 63710 AGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGC 63769 || | | | ||| || || | ||| || || || || || ||||| || || || Sbjct 821 AGCCATCAAGTGGTATGTGTCGAGAGCAGATTCGATGTCATCTTTGTGAATACCGACAGC 762 Query 63770 GACACGCATTAACATGTGCTGAGGTCTTTCAACAATTTTGTTGTTTATTTTCAACAAGTA 63829 || | ||||||||||||||| |||||||| | |||| || | |||||| | ||| Sbjct 761 AACCCTCATTAACATGTGCTGGGGTCTTTCTATAATTACCCCGTCAACTTTCAAAAGGTA 702 Query 63830 GGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTC 63876 || | ||||| ||||| || ||||| || | ||| ||| |||| Sbjct 701 AGACCTCTCCAATGTTTTGAACCCAAAGTAATCGTAGTCAAAATCTC 655 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 627975289047360