Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Passiflora_20edulis_20[genbank_20GCA_5F002156105.1_202017-05-22] 234,012 sequences; 165,656,733 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq88759 107 3e-18 seq57780 104 3e-17 seq88758 93.3 6e-14 >seq88759 Length=3029 Score = 107 bits (118), Expect = 3e-18 Identities = 146/204 (72%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 66216 CCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCA 66275 ||||| ||||| | |||| || || | |||| | || | |||||||||| ||| ||| Sbjct 1240 CCTCCTTGATCCACATATCGTGCTGTATCATTAAACACACGTAACATTGGAACAATTCCA 1181 Query 66276 TTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTTGCACGAATATTACTAATTGAT 66335 |||||||| |||||||| || ||||| || ||| | ||||| |||||| || || Sbjct 1180 TTGGATGTTCCATTGGTTCCACGAATATAACTGCCAGTAGCACGGATATTATGAACAGAA 1121 Query 66336 AGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATG 66395 | ||| ||||| || || ||| ||| | || || || || |||||||| || Sbjct 1120 ACACCAATTCCTCCAGCAGATTTGCTGATAACAGCACACTCCTTCAAGGTATCATATATT 1061 Query 66396 CCCTCTATACTATCATCCATCATG 66419 || || ||||||||||| ||||| Sbjct 1060 CCTTCAATACTATCATCTTTCATG 1037 Score = 93.3 bits (102), Expect = 6e-14 Identities = 105/141 (74%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 66455 AGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATT 66514 |||||| |||||||||| ||||||||||| || || |||||| | ||| | ||||| Sbjct 889 AGTTCCAGCATTAAATAGAGTAGGAGAAGCATGAGTGAACCATCGCTGAGACATTAGATG 830 Query 66515 GTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAA 66574 || || | |||| | || || ||||| || |||||||| || || || | ||| | Sbjct 829 ATATGTTTTAATAACCGAATCAATATCATCTTTGTGAATTCCAACAGCAACCCTCATCAG 770 Query 66575 CATGTGCTGAGGTCTTTCAAC 66595 |||||| |||||||| || || Sbjct 769 CATGTGTTGAGGTCTCTCTAC 749 >seq57780 Length=6884 Score = 104 bits (114), Expect = 3e-17 Identities = 156/222 (70%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 66215 TCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACC 66274 |||||| ||||| | || | ||| ||||||||| | |||| | ||| || | ||| || Sbjct 1210 TCCTCCTTGATCAACATAACGAGCAGTGTTATTAAACACTCGAAGCATGGGGACAATGCC 1151 Query 66275 ATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTTGCACGAATATTACTAATTGA 66334 || || || ||||| || || ||||| || ||| | ||||| ||||| || || Sbjct 1150 ATGTGAAGTCCCATTTGTACCACCAATATAACTGCCAGTGGCACGGATATTGTGGATGGA 1091 Query 66335 TAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGAT 66394 ||||||||||| || || ||| || | || ||| | || ||||||||||| Sbjct 1090 AAGACCTATTCCTCCGGCTGATTTGCTTATAACAGCACATTCCCTCAAAGTATCATAGAT 1031 Query 66395 GCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCT 66436 || || ||||||||||| ||||| || |||||||| || Sbjct 1030 TCCTTCAATACTATCATCTTTCATGCACAGGAGAAAACAACT 989 Score = 84.2 bits (92), Expect = 3e-11 Identities = 127/171 (74%), Gaps = 10/171 (6%) Strand=Plus/Minus Query 65959 TTTCGTATAGTGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGT-CCAATCCAGGA 66017 |||| || || ||||||| | || |||| || ||||| || | | |||| |||||| Sbjct 1727 TTTCATAGAGCGTATACAGTTTGTCAAACTGTTCACCCCAG-CAGTCTGCCAAACCAGGA 1669 Query 66018 CATTCATCCGGACACATCAACGACCACTCTCCGTCATC-CTTC--ACTCGTTTCATAAAG 66074 |||| || || | ||| ||||| ||||| |||| |||| |||| || ||||||| Sbjct 1668 GCATCATTGGGGCAAAACAAAGACCA-TCTCC--CATCACTTCGAACTCTTTCCATAAAG 1612 Query 66075 AGATCAGGAATCCAAAGAGCTATA-AATAAATCTCTGGTTCTATGTTCCTC 66124 ||||| |||||||||||||| ||| |||||||| | | | |||||| || Sbjct 1611 AGATCGGGAATCCAAAGAGC-ATAGAATAAATCCCGAGCCCGATGTTCTTC 1562 >seq88758 Length=3554 Score = 93.3 bits (102), Expect = 6e-14 Identities = 143/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 66216 CCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCA 66275 ||||| ||||| | || | || |||| ||| | || | |||||||||| ||| ||| Sbjct 1351 CCTCCTTGATCAACATAACGTGCTGTGTCATTGAACACACGTAACATTGGAACAATGCCA 1292 Query 66276 TTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTTGCACGAATATTACTAATTGAT 66335 |||||||| || || || || ||||| || || | ||||| |||||| || ||| Sbjct 1291 TTGGATGTTCCGTTAGTTCCACGAATATAACTGCCCGTGGCACGGATATTATGAACTGAA 1232 Query 66336 AGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATG 66395 | ||| ||||| || || ||| ||| | || || || || |||||||| || Sbjct 1231 ACACCAATTCCTCCAGCTGATTTGCTGATAACGGCACACTCCTTCAAGGTATCATATATA 1172 Query 66396 CCCTCTATACTATCATCCATCATG 66419 || || ||||||||||| ||||| Sbjct 1171 CCATCGATACTATCATCTTTCATG 1148 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 656247545834080