Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Passiflora_20edulis_20[genbank_20GCA_5F002156105.1_202017-05-22] 234,012 sequences; 165,656,733 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq57780 104 3e-17 seq88759 102 1e-16 seq88758 93.3 6e-14 >seq57780 Length=6884 Score = 104 bits (114), Expect = 3e-17 Identities = 156/222 (70%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 80094 TCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACC 80153 |||||| ||||| | || | ||| ||||||||| | |||| | ||| || | ||| || Sbjct 1210 TCCTCCTTGATCAACATAACGAGCAGTGTTATTAAACACTCGAAGCATGGGGACAATGCC 1151 Query 80154 ATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGA 80213 || || || ||||| || || ||||| || ||| ||||||| ||||| || || Sbjct 1150 ATGTGAAGTCCCATTTGTACCACCAATATAACTGCCAGTGGCACGGATATTGTGGATGGA 1091 Query 80214 TAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGAT 80273 ||||||||||| || || ||| || | || ||| | || ||||||||||| Sbjct 1090 AAGACCTATTCCTCCGGCTGATTTGCTTATAACAGCACATTCCCTCAAAGTATCATAGAT 1031 Query 80274 GCCCTCTATGCTATCATCAATCATGTTAAGTAGAAAACAGCT 80315 || || || |||||||| ||||| || |||||||| || Sbjct 1030 TCCTTCAATACTATCATCTTTCATGCACAGGAGAAAACAACT 989 Score = 84.2 bits (92), Expect = 3e-11 Identities = 150/218 (69%), Gaps = 6/218 (3%) Strand=Plus/Minus Query 80334 AGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATT 80393 |||||| || || || | |||||| | || || || ||||| || || || | | Sbjct 869 AGTTCCTGCGTTGAAAAGGGTAGGTGTGGCATGAGTGAACCAGCGTTGAGCCATCAAGTG 810 Query 80394 GTACGTCTCAATAGCTGATTCTATATCCCATTGATGAATTCCTACCGCGACACGCATTAA 80453 ||| || || | ||| ||||| || || || ||||| || || || || | |||||| Sbjct 809 GTATGTGTCGAGAGCAGATTCGATGTCATCTTTGTGAATACCGACAGCAACCCTCATTAA 750 Query 80454 CATGTGCTGAGGTCTTTC---AACGATCTTGTTATTTATTTTCAACAAGTAAGATTTTTC 80510 ||||||||| |||||||| || | | || | | |||||| | |||||| | || Sbjct 749 CATGTGCTGGGGTCTTTCTATAATTACCCCGTCA---ACTTTCAAAAGGTAAGACCTCTC 693 Query 80511 CAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTC 80548 ||| ||||| || ||||| || | ||| ||| |||| Sbjct 692 CAATGTTTTGAACCCAAAGTAATCGTAGTCAAAATCTC 655 >seq88759 Length=3029 Score = 102 bits (112), Expect = 1e-16 Identities = 145/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 80095 CCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCA 80154 ||||| ||||| | |||| || || | |||| | || | |||||||||| ||| ||| Sbjct 1240 CCTCCTTGATCCACATATCGTGCTGTATCATTAAACACACGTAACATTGGAACAATTCCA 1181 Query 80155 TTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGAT 80214 |||||||| |||||||| || ||||| || ||| | ||||| |||||| || || Sbjct 1180 TTGGATGTTCCATTGGTTCCACGAATATAACTGCCAGTAGCACGGATATTATGAACAGAA 1121 Query 80215 AGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATG 80274 | ||| ||||| || || ||| ||| | || || || || |||||||| || Sbjct 1120 ACACCAATTCCTCCAGCAGATTTGCTGATAACAGCACACTCCTTCAAGGTATCATATATT 1061 Query 80275 CCCTCTATGCTATCATCAATCATG 80298 || || || |||||||| ||||| Sbjct 1060 CCTTCAATACTATCATCTTTCATG 1037 Score = 96.9 bits (106), Expect = 5e-15 Identities = 106/141 (75%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 80334 AGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATT 80393 |||||| |||||||||| ||||||||||| || || |||||| | ||||| ||||| Sbjct 889 AGTTCCAGCATTAAATAGAGTAGGAGAAGCATGAGTGAACCATCGCTGAGACATTAGATG 830 Query 80394 GTACGTCTCAATAGCTGATTCTATATCCCATTGATGAATTCCTACCGCGACACGCATTAA 80453 || || | |||| | || || ||||| || |||||||| || || || | ||| | Sbjct 829 ATATGTTTTAATAACCGAATCAATATCATCTTTGTGAATTCCAACAGCAACCCTCATCAG 770 Query 80454 CATGTGCTGAGGTCTTTCAAC 80474 |||||| |||||||| || || Sbjct 769 CATGTGTTGAGGTCTCTCTAC 749 >seq88758 Length=3554 Score = 93.3 bits (102), Expect = 6e-14 Identities = 143/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 80095 CCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCA 80154 ||||| ||||| | || | || |||| ||| | || | |||||||||| ||| ||| Sbjct 1351 CCTCCTTGATCAACATAACGTGCTGTGTCATTGAACACACGTAACATTGGAACAATGCCA 1292 Query 80155 TTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGAT 80214 |||||||| || || || || ||||| || || ||||||| |||||| || ||| Sbjct 1291 TTGGATGTTCCGTTAGTTCCACGAATATAACTGCCCGTGGCACGGATATTATGAACTGAA 1232 Query 80215 AGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATG 80274 | ||| ||||| || || ||| ||| | || || || || |||||||| || Sbjct 1231 ACACCAATTCCTCCAGCTGATTTGCTGATAACGGCACACTCCTTCAAGGTATCATATATA 1172 Query 80275 CCCTCTATGCTATCATCAATCATG 80298 || || || |||||||| ||||| Sbjct 1171 CCATCGATACTATCATCTTTCATG 1148 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 716167756019680