Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Passiflora_20edulis_20[genbank_20GCA_5F002156105.1_202017-05-22] 234,012 sequences; 165,656,733 total letters Query= NC_004062.1 Length=119217 Score E Sequences producing significant alignments: (Bits) Value seq128449 89.7 4e-13 seq215049 87.8 1e-12 >seq128449 Length=764 Score = 89.7 bits (98), Expect = 4e-13 Identities = 161/230 (70%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 42882 GCCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGA 42941 ||| |||||||| | | |||||| |||| || ||||||||| | ||||| |||| Sbjct 657 GCCACCACGCAGGCGAAGCACCAAGTGGAGTGTAGACTCCTTTTGAATGTTGTAGTCGGC 598 Query 42942 CAATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGG 43001 |||||| | | | || || | || ||||||||||| |||| | || || || | || Sbjct 597 CAATGTCCTTCCATCTTCAAGCTGCTTGCCGGCAAATATCAGCCTTTGCTGGTCAGGTGG 538 Query 43002 CACACCTTCTTTTTCGCTG-ATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGC-CTCG 43059 | ||||| || || ||| ||| | | || || || | | |||||| ||| || Sbjct 537 GATTCCTTCCTTGTC-CTGTATCTTCGCCTTAACATTGTCGATTGTGTC-AGAGCTTTCT 480 Query 43060 ACGTCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109 || || | || || || |||||||| || || ||||||||||| ||||| Sbjct 479 ACTTCCAAAGTGATTGTCTTTCCGGTCAGTGTCTTCACAAAAATCTGCAT 430 >seq215049 Length=488 Score = 87.8 bits (96), Expect = 1e-12 Identities = 150/218 (69%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 42892 AGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGACAATGTACGT 42951 ||||| | |||||||||| ||| |||||| || | |||||| || | | ||| || Sbjct 1 AGTCTAAGTACCAAATGGAGAGTAGACTCCTTCTGAATATTGTAGTCCGCAAGTGTGCGG 60 Query 42952 TCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGCACACCTTCT 43011 | || || | ||| || || ||||| || | || |||||||| | || | || || Sbjct 61 CCATCCTCAAGTTGCTTCCCAGCAAAGATAAGTCTTTGTTGATCTGGTGGAATGCCCTCC 120 Query 43012 TTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACGTCTACCGTT 43071 || || |||| | || || | ||| ||| || | ||| || || | ||| Sbjct 121 TTATCCTGGATCTTTGCCTTCACATTATCAATTGTATCTGAACTCTCAACCTCCAACGTA 180 Query 43072 ATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109 ||||||||||| || || || ||||||||||||||||| Sbjct 181 ATAGTTTTTCCCGTGAGGGTCTTCACAAAAATTTGCAT 218 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380281925796696