Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Passiflora_20edulis_20[genbank_20GCA_5F002156105.1_202017-05-22] 234,012 sequences; 165,656,733 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq57780 107 3e-18 seq88759 98.7 1e-15 seq88758 89.7 7e-13 >seq57780 Length=6884 Score = 107 bits (118), Expect = 3e-18 Identities = 157/222 (71%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 72177 TCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACC 72236 |||||| ||||| | || | ||| ||||||||| | |||| | ||| || | ||| || Sbjct 1210 TCCTCCTTGATCAACATAACGAGCAGTGTTATTAAACACTCGAAGCATGGGGACAATGCC 1151 Query 72237 ATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTGCTAATTGA 72296 || || | ||||| || || ||||| || ||| ||||||| |||||| || || Sbjct 1150 ATGTGAAGTCCCATTTGTACCACCAATATAACTGCCAGTGGCACGGATATTGTGGATGGA 1091 Query 72297 TAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGAT 72356 ||||||||||| || || ||| || | || ||| | || ||||||||||| Sbjct 1090 AAGACCTATTCCTCCGGCTGATTTGCTTATAACAGCACATTCCCTCAAAGTATCATAGAT 1031 Query 72357 GCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCT 72398 || || ||||||||||| ||||| || |||||||| || Sbjct 1030 TCCTTCAATACTATCATCTTTCATGCACAGGAGAAAACAACT 989 >seq88759 Length=3029 Score = 98.7 bits (108), Expect = 1e-15 Identities = 144/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 72178 CCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCA 72237 ||||| ||||| | |||| || || | |||| | || | |||||||||| ||| ||| Sbjct 1240 CCTCCTTGATCCACATATCGTGCTGTATCATTAAACACACGTAACATTGGAACAATTCCA 1181 Query 72238 TTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTGCTAATTGAT 72297 ||||||| |||||||| || ||||| || ||| | ||||| ||||| || || Sbjct 1180 TTGGATGTTCCATTGGTTCCACGAATATAACTGCCAGTAGCACGGATATTATGAACAGAA 1121 Query 72298 AGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATG 72357 | ||| ||||| || || ||| ||| | || || || || |||||||| || Sbjct 1120 ACACCAATTCCTCCAGCAGATTTGCTGATAACAGCACACTCCTTCAAGGTATCATATATT 1061 Query 72358 CCCTCTATACTATCATCCATCATG 72381 || || ||||||||||| ||||| Sbjct 1060 CCTTCAATACTATCATCTTTCATG 1037 Score = 87.8 bits (96), Expect = 2e-12 Identities = 104/141 (74%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 72417 AGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATT 72476 |||||| |||||||||| ||||||||||| || || |||||| | ||||| ||||| Sbjct 889 AGTTCCAGCATTAAATAGAGTAGGAGAAGCATGAGTGAACCATCGCTGAGACATTAGATG 830 Query 72477 GTACGTCTCAATAGCTGATTCTATATCCCATTGATGTATTCCTACCGCGACACGCATTAA 72536 || || | |||| | || || ||||| || || ||||| || || || | ||| | Sbjct 829 ATATGTTTTAATAACCGAATCAATATCATCTTTGTGAATTCCAACAGCAACCCTCATCAG 770 Query 72537 CATATGCTGAGGTCTTTCAAC 72557 ||| || |||||||| || || Sbjct 769 CATGTGTTGAGGTCTCTCTAC 749 >seq88758 Length=3554 Score = 89.7 bits (98), Expect = 7e-13 Identities = 142/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 72178 CCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCA 72237 ||||| ||||| | || | || |||| ||| | || | |||||||||| ||| ||| Sbjct 1351 CCTCCTTGATCAACATAACGTGCTGTGTCATTGAACACACGTAACATTGGAACAATGCCA 1292 Query 72238 TTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTGCTAATTGAT 72297 ||||||| || || || || ||||| || || ||||||| ||||| || ||| Sbjct 1291 TTGGATGTTCCGTTAGTTCCACGAATATAACTGCCCGTGGCACGGATATTATGAACTGAA 1232 Query 72298 AGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATG 72357 | ||| ||||| || || ||| ||| | || || || || |||||||| || Sbjct 1231 ACACCAATTCCTCCAGCTGATTTGCTGATAACGGCACACTCCTTCAAGGTATCATATATA 1172 Query 72358 CCCTCTATACTATCATCCATCATG 72381 || || ||||||||||| ||||| Sbjct 1171 CCATCGATACTATCATCTTTCATG 1148 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 669176017169120