Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Passiflora_20edulis_20[genbank_20GCA_5F002156105.1_202017-05-22] 234,012 sequences; 165,656,733 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq215049 136 9e-27 seq128449 134 3e-26 seq76495 120 7e-22 seq40433 86.0 1e-11 >seq215049 Length=488 Score = 136 bits (150), Expect = 9e-27 Identities = 161/218 (74%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 104342 AGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTA 104401 || |||||||| | ||| | ||||| || ||||||||||| ||||| | || || | Sbjct 1 AGTCTAAGTACCAAATGGAGAGTAGACTCCTTCTGAATATTGTAGTCCGCAAGTGTGCGG 60 Query 104402 CCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCT 104461 || || || ||||| || |||||||| || || || |||||||| || || || || || Sbjct 61 CCATCCTCAAGTTGCTTCCCAGCAAAGATAAGTCTTTGTTGATCTGGTGGAATGCCCTCC 120 Query 104462 TTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTA 104521 |||||||| |||||||| || ||||| || | ||||| | || ||||| | ||| Sbjct 121 TTATCCTGGATCTTTGCCTTCACATTATCAATTGTATCTGAACTCTCAACCTCCAACGTA 180 Query 104522 ATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 ||||| || || || || || || ||||| || ||||| Sbjct 181 ATAGTTTTTCCCGTGAGGGTCTTCACAAAAATTTGCAT 218 >seq128449 Length=764 Score = 134 bits (148), Expect = 3e-26 Identities = 157/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 104348 AGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCT 104407 || || | ||| || |||||||| || || || |||||||||| || || | || || Sbjct 413 AGCACCAAATGCAAAGTAGATTCCTTTTGGATGTTATAGTCAGCAAGGGTGCGCCCATCC 354 Query 104408 TCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCC 104467 ||||| || || |||||||||||||||||||| || || || || || || || ||||| Sbjct 353 TCTAGCTGCTTGCCAGCAAAAATTAGCCTCTGCTGGTCTGGTGGGATGCCCTCCTTATCT 294 Query 104468 TGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTC 104527 |||||||| || || ||||| || | ||| || | || ||||| | || || ||| Sbjct 293 TGAATCTTGGCCTTCACATTATCAATGGTGTCAGAACTCTCCACCTCCAAGGTGATGGTC 234 Query 104528 TTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || || || || ||||| ||||| || ||||| Sbjct 233 TTGCCTGTGAGAGTTTTCACAAAAATTTGCAT 202 Score = 109 bits (120), Expect = 1e-18 Identities = 119/158 (75%), Gaps = 0/158 (0%) Strand=Plus/Minus Query 104342 AGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTA 104401 ||||| || || | || | || ||||| || || ||||| || |||| || || | Sbjct 191 AGCCTGAGCACCAAGTGGAGAGTGGATTCCTTTTGGATATTGTAATCAGCAAGGGTACGG 132 Query 104402 CCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCT 104461 || || |||||||| || ||||||||||| |||||||| || || || || |||||||| Sbjct 131 CCATCCTCTAGTTGCTTGCCAGCAAAAATGAGCCTCTGCTGGTCCGGTGGGATTCCTTCC 72 Query 104462 TTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATC 104499 ||||||||||| || || || ||||| || | ||| || Sbjct 71 TTATCCTGAATTTTGGCCTTCACATTATCAATGGTGTC 34 >seq76495 Length=1287 Score = 120 bits (132), Expect = 7e-22 Identities = 144/192 (75%), Gaps = 3/192 (2%) Strand=Plus/Minus Query 104368 TTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAA 104427 |||||| ||||| || ||||| ||||| ||||| ||||| ||||| || |||||||| Sbjct 388 TTCTTT-TGAATGTTGTAGTCGACAAGAGTCCTACCATCTTCAAGTTGCTTCCCAGCAAA 330 Query 104428 AATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATT 104487 ||| | |||||| || || || || || ||||| || ||||| |||||||| || ||||| Sbjct 329 AATCAACCTCTGCTGGTCTGGTGGGATGCCTTCCTTGTCCTGTATCTTTGCCTTCACATT 270 Query 104488 TTCTACGGTATCGCTAGGT-TCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTA 104546 || | ||| ||| || | || ||||| | || || || || || || || || || | Sbjct 269 GTCAATGGTGTCG-GAGCTCTCAACCTCCAAAGTGATGGTTTTTCCCGTGAGAGTCTTGA 211 Query 104547 CAAATATCTGCA 104558 |||| || |||| Sbjct 210 CAAAAATTTGCA 199 Score = 102 bits (112), Expect = 2e-16 Identities = 153/215 (71%), Gaps = 2/215 (1%) Strand=Plus/Minus Query 104347 AAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTC 104406 ||| || ||||| | || || || || || || || ||||| | | || | || || Sbjct 638 AAGGACAAGATGCAGAGTGGACTCCTTTTGGATGTTGTAGTCCGCCAAGGTACGCCCATC 579 Query 104407 TTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATC 104466 || || || || |||||||| || | |||||| || || || || || ||||| || || Sbjct 578 CTCCAGCTGCTTACCAGCAAAGATCAACCTCTGCTGGTCTGGGGGAATGCCTTCCTTGTC 519 Query 104467 CTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGT-TCTACCTCTAGTGTAATAG 104525 || || || ||||| ||||| || | ||||| || | || ||||| | ||||| | Sbjct 518 TTGGATTTTAGCTTTCACATTATCAATAGTATCAG-AGCTCTCCACCTCCAAGGTAATGG 460 Query 104526 TCTTACCAGTAAGTGTTTTTACAAATATCTGCATT 104560 | || ||||| || || || ||||||||||||||| Sbjct 459 TTTTCCCAGTCAGCGTCTTAACAAATATCTGCATT 425 >seq40433 Length=1890 Score = 86.0 bits (94), Expect = 1e-11 Identities = 86/112 (77%), Gaps = 0/112 (0%) Strand=Plus/Minus Query 104451 GTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTA 104510 |||| || ||||| ||||| ||||| || || ||||| || | ||||| || | ||| | Sbjct 761 GTATACCCTCTTTGTCCTGGATCTTGGCCTTCACATTGTCAATAGTATCACTTGATTCGA 702 Query 104511 CCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATTTT 104562 |||| ||||| || ||||| || || | || || ||||| ||||||||||| Sbjct 701 CCTCAAGTGTTATGGTCTTGCCCGTCAAGGTCTTCACAAAGATCTGCATTTT 650 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1147946186644496