Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Passiflora_20edulis_20[genbank_20GCA_5F002156105.1_202017-05-22] 234,012 sequences; 165,656,733 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq143273 120 3e-22 seq128449 113 4e-20 seq76495 107 2e-18 seq215049 96.9 3e-15 seq30058 93.3 4e-14 seq87537 84.2 2e-11 >seq143273 Length=304 Score = 120 bits (132), Expect = 3e-22 Identities = 152/208 (73%), Gaps = 1/208 (0%) Strand=Plus/Minus Query 94801 CAAG-TGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCCA 94859 |||| |||| ||| || |||||||| | |||||| || || || |||||| | Sbjct 293 CAAGATGCAGAGTGGACTCCTTTTGGATGTTATAGTCTGCCAGGGTACGTCCATCCTCTA 234 Query 94860 GCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAA 94919 |||| || || | ||||| | ||||||||| || || ||||||||||| ||||| | | Sbjct 233 GCTGCTTACCAGCGAAGATCAGTCTTTGCTGGTCCGGGGGAATACCTTCCTTGTCTTGGA 174 Query 94920 TTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTC 94979 |||| ||||| || | | ||| || | | || || || | ||| |||||||| | Sbjct 173 TTTTGGCCTTCACATTATCAATAGTATCCGAGCTTTCAACCTCCAACGTAATGGTTTTAC 114 Query 94980 CAGTAAGAGTTTTCACAAAGATCTGCAT 95007 |||| ||||| ||||||||||||||||| Sbjct 113 CAGTCAGAGTCTTCACAAAGATCTGCAT 86 >seq128449 Length=764 Score = 113 bits (124), Expect = 4e-20 Identities = 152/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 94798 CACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTC 94857 |||||| |||||||||||||||||||| | |||||| || | ||| |||||| Sbjct 411 CACCAAATGCAAAGTAGATTCCTTTTGGATGTTATAGTCAGCAAGGGTGCGCCCATCCTC 352 Query 94858 CAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATA 94917 ||||| || || |||| |||| || ||||| ||||| || || || || || || | Sbjct 351 TAGCTGCTTGCCAGCAAAAATTAGCCTCTGCTGGTCTGGTGGGATGCCCTCCTTATCTTG 292 Query 94918 AATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTT 94977 ||| || ||||| || | | ||||||| || || || | |||||||| || Sbjct 291 AATCTTGGCCTTCACATTATCAATGGTGTCAGAACTCTCCACCTCCAAGGTGATGGTCTT 232 Query 94978 TCCAGTAAGAGTTTTCACAAAGATCTGCATGC 95009 || || |||||||||||||| || ||||||| Sbjct 231 GCCTGTGAGAGTTTTCACAAAAATTTGCATGC 200 >seq76495 Length=1287 Score = 107 bits (118), Expect = 2e-18 Identities = 164/234 (70%), Gaps = 0/234 (0%) Strand=Plus/Minus Query 94777 CACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATC 94836 || |||||| | || |||||||||||||| | | || | |||||| | ||| || || Sbjct 428 CATTCCTCCACGCAGACGCAACACCAAGTGAAGGGATGACTTCTTTTGAATGTTGTAGTC 369 Query 94837 GCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGG 94896 | | ||| | ||| || || || || || |||| || || || ||||| ||||| Sbjct 368 GACAAGAGTCCTACCATCTTCAAGTTGCTTCCCAGCAAAAATCAACCTCTGCTGGTCTGG 309 Query 94897 AGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTC 94956 || || ||||| ||||| | || |||||||| || | | | ||||| | | || Sbjct 308 TGGGATGCCTTCCTTGTCCTGTATCTTTGCCTTCACATTGTCAATGGTGTCGGAGCTCTC 249 Query 94957 GACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCATGCT 95010 || || | |||||||||||||| || ||||| || ||||| || |||| ||| Sbjct 248 AACCTCCAAAGTGATGGTTTTTCCCGTGAGAGTCTTGACAAAAATTTGCAAGCT 195 Score = 102 bits (112), Expect = 7e-17 Identities = 148/208 (71%), Gaps = 1/208 (0%) Strand=Plus/Minus Query 94801 CAAG-TGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCCA 94859 |||| |||| ||| || |||||||| | ||| || || || || |||||||| Sbjct 633 CAAGATGCAGAGTGGACTCCTTTTGGATGTTGTAGTCCGCCAAGGTACGCCCATCCTCCA 574 Query 94860 GCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAA 94919 |||| || || ||||||| || || ||||| ||||| ||||| ||||| ||||| | | Sbjct 573 GCTGCTTACCAGCAAAGATCAACCTCTGCTGGTCTGGGGGAATGCCTTCCTTGTCTTGGA 514 Query 94920 TTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTC 94979 |||| || || || | | ||| |||| | || || || | || |||||||| | Sbjct 513 TTTTAGCTTTCACATTATCAATAGTATCAGAGCTCTCCACCTCCAAGGTAATGGTTTTCC 454 Query 94980 CAGTAAGAGTTTTCACAAAGATCTGCAT 95007 |||| || || || ||||| |||||||| Sbjct 453 CAGTCAGCGTCTTAACAAATATCTGCAT 426 >seq215049 Length=488 Score = 96.9 bits (106), Expect = 3e-15 Identities = 121/166 (73%), Gaps = 0/166 (0%) Strand=Plus/Plus Query 94768 AAAATTTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCAC 94827 |||| | | || || |||| | ||| | ||||||||| | ||| || ||||| || | Sbjct 314 AAAAATATGCATGCCACCTCGGAGTCGAAGCACCAAGTGGAGAGTGGACTCCTTCTGGAT 373 Query 94828 GTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTG 94887 ||| || ||| || || || ||||||||||| |||||| | ||||| | || || Sbjct 374 GTTGTAGTCGGCCAAGGTCCTGCCGTCCTCCAGCTGCTTTCCGGCGAAGATCAGCCTCTG 433 Query 94888 CTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACG 94933 ||| || || ||||| ||||| ||||| | ||| || ||||||||| Sbjct 434 CTGGTCCGGGGGAATTCCTTCCTTGTCTTGAATCTTGGCCTTGACG 479 >seq30058 Length=4835 Score = 93.3 bits (102), Expect = 4e-14 Identities = 114/156 (73%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 94852 ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTT 94911 ||| || || || || ||| ||||||| | ||||| |||||||| |||||||| || || Sbjct 7 ATCTTCAAGTTGCTTGCCGGCAAAGATGAGCCTTTGTTGATCTGGGGGAATACCCTCCTT 66 Query 94912 GTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGAT 94971 ||| | || || ||||| || | | | ||||| | || || |||| || || Sbjct 67 GTCCTGGATCTTAGCCTTTACATTGTCAATGGTGTCGGAACTTTCCACTTCAAGGGTTAT 126 Query 94972 GGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || ||||| ||||||||||||||||| || ||||| Sbjct 127 AGTCTTTCCGGTAAGAGTTTTCACAAATATTTGCAT 162 >seq87537 Length=233 Score = 84.2 bits (92), Expect = 2e-11 Identities = 112/156 (72%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 94852 ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTT 94911 ||| |||||||| || || ||||||| | |||||||| || || || || ||||| || Sbjct 200 ATCTTCCAGCTGCTTCCCTGCAAAGATCAGCCTTTGCTGGTCCGGCGGGATCCCTTCCTT 141 Query 94912 GTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGAT 94971 || | || || || || || | | || || | | || || || | ||||| Sbjct 140 ATCCTGGATCTTGGCTTTAACATTATCAATGGTATCGGAGCTCTCCACCTCTAGAGTGAT 81 Query 94972 GGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 ||| ||||| || ||||||||||||||||||||||| Sbjct 80 GGTCTTTCCCGTTAGAGTTTTCACAAAGATCTGCAT 45 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 446979880996320