Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Passiflora_20edulis_20[genbank_20GCA_5F002156105.1_202017-05-22] 234,012 sequences; 165,656,733 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq57780 98.7 1e-15 seq228379 93.3 5e-14 seq88759 93.3 5e-14 >seq57780 Length=6884 Score = 98.7 bits (108), Expect = 1e-15 Identities = 155/222 (70%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 63371 TCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACC 63430 |||||| ||||| | || | ||| ||||||||| | |||| | ||| || | ||| || Sbjct 1210 TCCTCCTTGATCAACATAACGAGCAGTGTTATTAAACACTCGAAGCATGGGGACAATGCC 1151 Query 63431 GTTTGATATACCATTGGTACCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGA 63490 | ||| | ||||| ||||| ||||| || ||| ||||||| ||||| || || Sbjct 1150 ATGTGAAGTCCCATTTGTACCACCAATATAACTGCCAGTGGCACGGATATTGTGGATGGA 1091 Query 63491 TAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGAT 63550 ||||||||||| || || ||| || | || ||| | || || |||||||| Sbjct 1090 AAGACCTATTCCTCCGGCTGATTTGCTTATAACAGCACATTCCCTCAAAGTATCATAGAT 1031 Query 63551 ACCCTCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCT 63592 || || || |||||||| ||||| || |||||||| || Sbjct 1030 TCCTTCAATACTATCATCTTTCATGCACAGGAGAAAACAACT 989 >seq228379 Length=361 Score = 93.3 bits (102), Expect = 5e-14 Identities = 195/291 (67%), Gaps = 0/291 (0%) Strand=Plus/Minus Query 33589 AGACTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTA 33648 || || ||||| || || || ||||| || ||||| ||||| || || || ||| | Sbjct 315 AGGCTGTACATCTCGGAGTGGATGTTCTCGATGGCGATCTGGAAGCCATAAAAAGCACGC 256 Query 33649 GCCTCGGTAATCTGTACTTCTGTACAAAATCGTTCCGCCAAATTTTCATTCACTATTCCG 33708 ||||| | | ||| || || | || | | || | |||||| || |||||| Sbjct 255 GCCTCCGCCACCTGAACCTCCTTCATGAAGCTGCCGGCTAGGTTTTCAAGAACGATTCCG 196 Query 33709 TCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGT 33768 || ||| || || || |||| ||||| || |||| || |||||||||||||| Sbjct 195 TCGGAGGCGGCGAAGAAGGCCAGCACATGAGAAATGAAATGCTTCTCGTCTGGTGTTAGC 136 Query 33769 TTATTCCAATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCC 33828 | ||| | | || ||| | || | ||| || || || ||||||| || || ||| Sbjct 135 GCTTCCCAGTGACGGAGATCCTGGGAGAGATCCACCTCCTCGGCTGTCCAGAAGGAGGCC 76 Query 33829 TCTGCCTTTTTATACATGTTCCAGATGTCATAATATTGGATTGGGAAAATA 33879 ||||| || || ||||| | ||| || || || ||||| ||||| ||| Sbjct 75 TCTGCTTTCTTGTACATTTCCCAAATCTCGGGGTACTGGATCGGGAACATA 25 >seq88759 Length=3029 Score = 93.3 bits (102), Expect = 5e-14 Identities = 105/141 (74%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 63611 AGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATT 63670 |||||| |||||||||| ||||||||||| || || |||||| | ||| | ||||| Sbjct 889 AGTTCCAGCATTAAATAGAGTAGGAGAAGCATGAGTGAACCATCGCTGAGACATTAGATG 830 Query 63671 GTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAA 63730 || || | |||| | || || ||||| || |||||||| || || || | ||| | Sbjct 829 ATATGTTTTAATAACCGAATCAATATCATCTTTGTGAATTCCAACAGCAACCCTCATCAG 770 Query 63731 CATGTGCTGAGGTCTTTCAAC 63751 |||||| |||||||| || || Sbjct 769 CATGTGTTGAGGTCTCTCTAC 749 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 621124985997920