Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Passiflora_20edulis_20[genbank_20GCA_5F002156105.1_202017-05-22] 234,012 sequences; 165,656,733 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq76495 113 4e-20 seq143273 105 6e-18 seq128449 98.7 9e-16 seq215049 95.1 1e-14 seq105808 82.4 7e-11 >seq76495 Length=1287 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||| || || | ||| | || ||||||||||| |||||||| || | Sbjct 652 CCACCACGGAGACGAAGGACAAGATGCAGAGTGGACTCCTTTTGGATGTTGTAGTCCGCC 593 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||| ||| ||||| |||||||| || || |||| || | ||||||||| || || Sbjct 592 AAGGTACGCCCATCCTCCAGCTGCTTACCAGCAAAGATCAACCTCTGCTGGTCTGGGGGA 533 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || ||||| ||||| |||||| || | | || | |||||| | | ||| | Sbjct 532 ATGCCTTCCTTGTCTTGGATTTTAGCTTTCACATTATCAATAGTATCAGAGCTCTCCACC 473 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | ||||| |||||| || || || || || || || |||||||| Sbjct 472 TCCAAGGTAATGGTTTTCCCAGTCAGCGTCTTAACAAATATCTGCAT 426 >seq143273 Length=304 Score = 105 bits (116), Expect = 6e-18 Identities = 153/216 (71%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 131019 ACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGA 131078 ||| || || | ||| | || ||||||||||| ||||| || || || ||| || Sbjct 301 ACGAAGGACAAGATGCAGAGTGGACTCCTTTTGGATGTTATAGTCTGCCAGGGTACGTCC 242 Query 131079 GTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTT 131138 |||||||||||||| || ||| |||| | | ||||||||||| || || ||||| || Sbjct 241 ATCCTCTAGCTGCTTACCAGCGAAGATCAGTCTTTGCTGGTCCGGGGGAATACCTTCCTT 182 Query 131139 GTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAAC 131198 ||| |||||| ||| | | || | |||||| | | || | || | |||| Sbjct 181 GTCTTGGATTTTGGCCTTCACATTATCAATAGTATCCGAGCTTTCAACCTCCAACGTAAT 122 Query 131199 GGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 ||||||||| || ||||| || || || |||||||| Sbjct 121 GGTTTTACCAGTCAGAGTCTTCACAAAGATCTGCAT 86 >seq128449 Length=764 Score = 98.7 bits (108), Expect = 9e-16 Identities = 168/238 (71%), Gaps = 18/238 (8%) Strand=Plus/Minus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 |||||| || | ||| ||||| ||||| | || || |||||||| ||||| || || Sbjct 429 GCCACCACGGAGACGGAGCACCAAATGCAAAGTAGATTCCTTTTGGATGTTATAGTCAGC 370 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 | ||||||| ||||||||||||||||| || | |||| | ||||||||| || || Sbjct 369 AAGGGTGCGCCCATCCTCTAGCTGCTTGCCAGCAAAAATTAGCCTCTGCTGGTCTGGTGG 310 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATC---GGTG---GA 131180 ||| || || || || ||| | |||| || || |||| |||| |||| || Sbjct 309 GATGCCCTCCTTATC-TTGAAT-----CTTG-GC--CTTCACATTATCAATGGTGTCAGA 259 Query 131181 ---CTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235 ||| | || | ||| | ||| || || || |||||||| || ||||| |||||| Sbjct 258 ACTCTCCACCTCCAAGGTGATGGTCTTGCCTGTGAGAGTTTTCACAAAAATTTGCATG 201 Score = 89.7 bits (98), Expect = 5e-13 Identities = 157/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 |||||| |||| || ||||| || || | || |||||||||||||||||||| ||| Sbjct 657 GCCACCACGCAGGCGAAGCACCAAGTGGAGTGTAGACTCCTTTTGAATGTTGTAGTCGGC 598 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 || || | || || ||||||||||| || | || | | |||||||| || || Sbjct 597 CAATGTCCTTCCATCTTCAAGCTGCTTGCCGGCAAATATCAGCCTTTGCTGGTCAGGTGG 538 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 ||||||||| ||||| || ||| ||| | | || | || || | | || | Sbjct 537 GATTCCTTCCTTGTCCTGTATCTTCGCCTTAACATTGTCGATTGTGTCAGAGCTTTCTAC 478 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235 || | || | || || ||||| || || || || |||||||||||| Sbjct 477 TTCCAAAGTGATTGTCTTTCCGGTCAGTGTCTTCACAAAAATCTGCATG 429 >seq215049 Length=488 Score = 95.1 bits (104), Expect = 1e-14 Identities = 102/135 (76%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 |||||| || | || ||||| || || | || |||||||| || |||||||| ||| Sbjct 326 GCCACCTCGGAGTCGAAGCACCAAGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGC 385 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 || ||| | |||||| |||||||| || ||| |||| | | |||||||||||| || Sbjct 386 CAAGGTCCTGCCGTCCTCCAGCTGCTTTCCGGCGAAGATCAGCCTCTGCTGGTCCGGGGG 445 Query 131127 GATTCCTTCTTTGTC 131141 |||||||| ||||| Sbjct 446 AATTCCTTCCTTGTC 460 >seq105808 Length=219 Score = 82.4 bits (90), Expect = 7e-11 Identities = 87/115 (76%), Gaps = 0/115 (0%) Strand=Plus/Plus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 |||||| || | ||| ||||| ||||| | ||| |||||||| |||||||| || || Sbjct 105 GCCACCACGGAGACGGAGCACCAAATGGAGGGTGGACTCCTTCTGAATGTTATAGTCAGC 164 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCC 131121 | |||||| |||||||||||||| || || |||| || | ||||||||| Sbjct 165 AAGGGTGCGGCCATCCTCTAGCTGCTTTCCGGCAAAGATCAACCTTTGCTGGTCC 219 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 470632091758080