Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Passiflora_20edulis_20[genbank_20GCA_5F002156105.1_202017-05-22] 234,012 sequences; 165,656,733 total letters Query= NC_008035.3 Length=126629 Score E Sequences producing significant alignments: (Bits) Value seq76495 104 2e-17 seq128449 86.0 5e-12 seq215049 84.2 2e-11 seq1027 84.2 2e-11 >seq76495 Length=1287 Score = 104 bits (114), Expect = 2e-17 Identities = 153/215 (71%), Gaps = 4/215 (2%) Strand=Plus/Minus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 || || | |||||| |||||||||||||| ||||||||||| |||| ||| | ||| Sbjct 637 AGGACAAGATGCAGAGTGGACTCCTTTTGGATGTTGTAGTCCGCCAAGGTACGCCCATCC 578 Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC- 16842 |||| || || || ||| | || | || ||| ||||| || | ||| || ||||| Sbjct 577 TCCAGCTGCTTACCAGCAAAGATCAACCTCTGCTGGTCTGGGGGAATGCCTTCCTTGTCT 518 Query 16843 -GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGG 16901 || || ||| ||||| | | | ||| || | |||| |||| ||| |||| Sbjct 517 TGGATTTTAGCT--TTCACATTATCAATAGTATCAGAGCTCTCCACCTCCAAGGTAATGG 460 Query 16902 TTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATT 16936 |||| || |||||||| || ||||| ||||||||| Sbjct 459 TTTTCCCAGTCAGCGTCTTAACAAATATCTGCATT 425 Score = 86.0 bits (94), Expect = 5e-12 Identities = 157/228 (69%), Gaps = 4/228 (2%) Strand=Plus/Minus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 ||||| || || | || |||| || || | |||| |||||| |||||||||||| | Sbjct 424 CCTCCACGCAGACGCAACACCAAGTGAAGGGATGACTTCTTTTGAATGTTGTAGTCGACA 365 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | || | | || || | ||| || || ||| |||| | || ||| ||||| || Sbjct 364 AGAGTCCTACCATCTTCAAGTTGCTTCCCAGCAAAAATCAACCTCTGCTGGTCTGGTGGG 305 Query 16829 ACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886 | ||| || ||||| | ||||| |||||| | | | | |||||| | ||| Sbjct 304 ATGCCTTCCTTGTCCTGTATCTTTGC--CTTCACATTGTCAATGGTGTCGGAGCTCTCAA 247 Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCA 16934 |||| |||||||||||||| || || || ||||||||||| |||| Sbjct 246 CCTCCAAAGTGATGGTTTTTCCCGTGAGAGTCTTGACAAAAATTTGCA 199 >seq128449 Length=764 Score = 86.0 bits (94), Expect = 5e-12 Identities = 146/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 || |||| || || || ||||||||||| |||||||||||||||| || | | || Sbjct 641 AGCACCAAGTGGAGTGTAGACTCCTTTTGAATGTTGTAGTCGGCCAATGTCCTTCCATCT 582 Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCG 16843 || | || ||||| ||| | || |||| || ||||| || | || || ||||| Sbjct 581 TCAAGCTGCTTGCCGGCAAATATCAGCCTTTGCTGGTCAGGTGGGATTCCTTCCTTGTCC 522 Query 16844 GCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTT 16903 || | | ||| || | | | | ||||| | || ||||| ||||| || Sbjct 521 TGTATCTTCGCCTTAACATTGTCGATTGTGTCAGAGCTTTCTACTTCCAAAGTGATTGTC 462 Query 16904 TTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 ||||||||||| || || |||||||||||||| Sbjct 461 TTTCCGGTCAGTGTCTTCACAAAAATCTGCAT 430 >seq215049 Length=488 Score = 84.2 bits (92), Expect = 2e-11 Identities = 87/114 (76%), Gaps = 0/114 (0%) Strand=Plus/Plus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 || ||||| || | || |||| || || ||||||||||| || ||||||||||||||| Sbjct 327 CCACCTCGGAGTCGAAGCACCAAGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGCC 386 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCC 16822 | ||| || ||||||||| || || || || | || |||| ||| |||||| Sbjct 387 AAGGTCCTGCCGTCCTCCAGCTGCTTTCCGGCGAAGATCAGCCTCTGCTGGTCC 440 >seq1027 Length=13177 Score = 84.2 bits (92), Expect = 2e-11 Identities = 87/114 (76%), Gaps = 0/114 (0%) Strand=Plus/Plus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 ||||| | ||||||| |||| ||| || || |||||||| || ||||| ||||| || Sbjct 4813 CCTCCCCTCAGCCTCAAAACCAGATGAAGTGTAGACTCCTTCTGGATGTTATAGTCAGCA 4872 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCC 16822 | |||| | | ||||||||||| ||||| || |||| | | |||||||||| Sbjct 4873 AGGGTTCGGCCATCCTCCAATTGCTTGCCAGCGAAAATCAATCTCTGTTGGTCC 4926 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 403932680415880