Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Passiflora_20edulis_20[genbank_20GCA_5F002156105.1_202017-05-22] 234,012 sequences; 165,656,733 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq19 131 1e-25 seq215049 113 3e-20 seq128449 96.9 2e-15 seq76495 87.8 1e-12 >seq19 Length=8689 Score = 131 bits (144), Expect = 1e-25 Identities = 86/95 (91%), Gaps = 5/95 (5%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 ||||||||||||||||||||||||||||| ||||||||| |||| || |||||||| Sbjct 1421 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTGGATAGTAGACAGGGACAGTGGGAATCTCGT 1480 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||||||||||| Sbjct 1481 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 1515 Score = 87.8 bits (96), Expect = 1e-12 Identities = 65/76 (86%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||| |||||||| ||||||| ||||||||| ||||||||||| |||||||| ||| | Sbjct 3420 CTCTCTTTTCAAAGTCCTTTTCATCTTTCCCTCGCGGTACTTGTTTGCTATCGGCCTCTC 3479 Query 20007 GGTAATATTTAGCCTT 20022 | ||||||||||| Sbjct 3480 GCCCGTATTTAGCCTT 3495 >seq215049 Length=488 Score = 113 bits (124), Expect = 3e-20 Identities = 151/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 38109 ACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTCGTCT 38168 |||||||| ||||| |||||| ||||||||||| || | | || | || || Sbjct 10 ACCAAATGGAGAGTAGACTCCTTCTGAATATTGTAGTCCGCAAGTGTGCGGCCATCCTCA 69 Query 38169 AATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTCCATA 38228 | ||| || || ||||| || || | ||||||||| | || | ||| || || ||| Sbjct 70 AGTTGCTTCCCAGCAAAGATAAGTCTTTGTTGATCTGGTGGAATGCCCTCCTTATCCTGG 129 Query 38229 ATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGTTTTA 38288 || ||| ||||||||| | | |||||| ||| ||||| || || ||||||||||| Sbjct 130 ATCTTTGCCTTCACATTATCAATTGTATCTGAACTCTCAACCTCCAACGTAATAGTTTTT 189 Query 38289 CCCGTCAAGGTTTTCACGAATATCTGCATG 38318 ||||| | ||| ||||| || || |||||| Sbjct 190 CCCGTGAGGGTCTTCACAAAAATTTGCATG 219 >seq128449 Length=764 Score = 96.9 bits (106), Expect = 2e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 38091 CCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGAC 38150 ||||| | || || | |||||| || || || |||||||||||| ||||| || | | Sbjct 656 CCACCACGCAGGCGAAGCACCAAGTGGAGTGTAGACTCCTTTTGAATGTTGTAGTCGGCC 597 Query 38151 AAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGG 38210 || | | | || || | || || ||||||||||| || | ||| || || | ||| Sbjct 596 AATGTCCTTCCATCTTCAAGCTGCTTGCCGGCAAATATCAGCCTTTGCTGGTCAGGTGGG 537 Query 38211 ACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACT 38270 | ||||| |||||| || || ||| ||||| | || || || ||||| ||| Sbjct 536 ATTCCTTCCTTGTCCTGTATCTTCGCCTTAACATTGTCGATTGTGTCAGAGCTTTCTACT 477 Query 38271 TCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATG 38318 || || || || || || || |||| || ||||| || ||||||||| Sbjct 476 TCCAAAGTGATTGTCTTTCCGGTCAGTGTCTTCACAAAAATCTGCATG 429 Score = 82.4 bits (90), Expect = 5e-11 Identities = 128/183 (70%), Gaps = 0/183 (0%) Strand=Plus/Minus Query 38108 CACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTCGTC 38167 |||||| || |||||| |||||||| ||||||||||||| | ||| | || || Sbjct 183 CACCAAGTGGAGAGTGGATTCCTTTTGGATATTGTAATCAGCAAGGGTACGGCCATCCTC 124 Query 38168 TAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTCCAT 38227 || ||| || || ||||| || || | || || || | |||| ||||| || ||| Sbjct 123 TAGTTGCTTGCCAGCAAAAATGAGCCTCTGCTGGTCCGGTGGGATTCCTTCCTTATCCTG 64 Query 38228 AATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGTTTT 38287 |||||| ||||||||| | | || ||| || ||||| || || || || ||||| Sbjct 63 AATTTTGGCCTTCACATTATCAATGGTGTCTGAGCTCTCAACCTCCAAAGTGATGGTTTT 4 Query 38288 ACC 38290 || Sbjct 3 TCC 1 >seq76495 Length=1287 Score = 87.8 bits (96), Expect = 1e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 38090 ACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGA 38149 |||||| | | ||| | || | ||| |||||| ||||||||| || ||||| || | Sbjct 653 ACCACCACGGAGACGAAGGACAAGATGCAGAGTGGACTCCTTTTGGATGTTGTAGTCCGC 594 Query 38150 CAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGG 38209 ||| ||| | || || | || || || ||||| || | | || || || | ||| Sbjct 593 CAAGGTACGCCCATCCTCCAGCTGCTTACCAGCAAAGATCAACCTCTGCTGGTCTGGGGG 534 Query 38210 GACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAAC 38269 | |||||| ||||| ||||| |||||||| | | |||||| || || || Sbjct 533 AATGCCTTCCTTGTCTTGGATTTTAGCTTTCACATTATCAATAGTATCAGAGCTCTCCAC 474 Query 38270 TTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 || || ||||| ||||| || |||| || || || ||||||||||| Sbjct 473 CTCCAAGGTAATGGTTTTCCCAGTCAGCGTCTTAACAAATATCTGCAT 426 Score = 84.2 bits (92), Expect = 1e-11 Identities = 160/232 (69%), Gaps = 3/232 (1%) Strand=Plus/Minus Query 38086 CATTACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAAT 38145 |||| || || | || |||||||||||| ||||| | || ||||||||| ||||| | Sbjct 428 CATT-CCTCCACGCAGACGCAACACCAAGTGAAGGGATGACTTCTTTTGAATGTTGTAGT 370 Query 38146 CAGACAAAACACGT-TCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCG 38204 | ||||| | | | | || || | ||| || || ||||| || | | || || || Sbjct 369 C-GACAAGAGTCCTACCATCTTCAAGTTGCTTCCCAGCAAAAATCAACCTCTGCTGGTCT 311 Query 38205 GAGGGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTT 38264 | |||| |||||| |||||| || ||| ||||||||| | | || || || Sbjct 310 GGTGGGATGCCTTCCTTGTCCTGTATCTTTGCCTTCACATTGTCAATGGTGTCGGAGCTC 251 Query 38265 TCAACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCA 38316 ||||| || || || || ||||| ||||| | || || || || || |||| Sbjct 250 TCAACCTCCAAAGTGATGGTTTTTCCCGTGAGAGTCTTGACAAAAATTTGCA 199 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 333991923467972