Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Passiflora_20edulis_20[genbank_20GCA_5F002156105.1_202017-05-22] 234,012 sequences; 165,656,733 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq30058 118 9e-22 seq128449 111 1e-19 seq215049 98.7 8e-16 seq143273 98.7 8e-16 seq76495 93.3 4e-14 >seq30058 Length=4835 Score = 118 bits (130), Expect = 9e-22 Identities = 115/148 (78%), Gaps = 0/148 (0%) Strand=Plus/Minus Query 22217 AGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCA 22276 |||||||||| ||||| |||||| | ||||| || || | || ||||||||||||| Sbjct 164 AGATGCAAATATTTGTGAAAACTCTTACCGGAAAGACTATAACCCTTGAAGTGGAAAGTT 105 Query 22277 CCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATC 22336 |||| ||| | ||| || | || || || || ||||||||||||||||| || |||| Sbjct 104 CCGACACCATTGACAATGTAAAGGCTAAGATCCAGGACAAGGAGGGTATTCCCCCAGATC 45 Query 22337 AACAACGTCTTATATTTGCCGGCAAACA 22364 ||||| | || || ||||||||||| || Sbjct 44 AACAAAGGCTCATCTTTGCCGGCAAGCA 17 >seq128449 Length=764 Score = 111 bits (122), Expect = 1e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||||||||| |||||| | || || || || |||| | || ||||| | | Sbjct 202 ATGCAAATTTTTGTGAAAACTCTCACAGGCAAGACCATCACCTTGGAGGTGGAGAGTTCT 261 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | || || | || || |||||||| |||||||| || ||||| || || Sbjct 262 GACACCATTGATAATGTGAAGGCCAAGATTCAAGATAAGGAGGGCATCCCACCAGACCAG 321 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || | || || ||||| ||||| ||| |||||||| |||||| | | || || ||| Sbjct 322 CAGAGGCTAATTTTTGCTGGCAAGCAGCTAGAGGATGGGCGCACCCTTGCTGACTATAAC 381 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGT 22427 || ||||| ||||| || | ||||| || Sbjct 382 ATCCAAAAGGAATCTACTTTGCATTTGGT 410 Score = 104 bits (114), Expect = 2e-17 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| |||||||| || || | ||||| || || ||||| | ||||| |||| | | Sbjct 430 ATGCAGATTTTTGTGAAGACACTGACCGGAAAGACAATCACTTTGGAAGTAGAAAGCTCT 489 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | ||| || | || || || || |||||||| || || ||||| || || Sbjct 490 GACACAATCGACAATGTTAAGGCGAAGATACAGGACAAGGAAGGAATCCCACCTGACCAG 549 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 ||| | || |||||||||||||| ||| | || ||| | || | |||| |||||| Sbjct 550 CAAAGGCTGATATTTGCCGGCAAGCAGCTTGAAGATGGAAGGACATTGGCCGACTACAAC 609 Query 22399 ATTCAAAAAGAATCCAC 22415 |||||||| || || || Sbjct 610 ATTCAAAAGGAGTCTAC 626 >seq215049 Length=488 Score = 98.7 bits (108), Expect = 8e-16 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||||||||| || || | || || ||||| | || | || || || | | Sbjct 218 ATGCAAATTTTTGTGAAGACCCTCACGGGAAAAACTATTACGTTGGAGGTTGAGAGTTCA 159 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 ||||| | || || | || ||| || || || |||||||| |||||||| |||||| Sbjct 158 GATACAATTGATAATGTGAAGGCAAAGATCCAGGATAAGGAGGGCATTCCACCAGATCAA 99 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 ||| | ||||| ||||| || || || | |||||| |||||| | | || ||||| Sbjct 98 CAAAGACTTATCTTTGCTGGGAAGCAACTTGAGGATGGCCGCACACTTGCGGACTACAAT 39 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGT 22427 ||||| || || || || | ||||| || Sbjct 38 ATTCAGAAGGAGTCTACTCTCCATTTGGT 10 >seq143273 Length=304 Score = 98.7 bits (108), Expect = 8e-16 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || ||||| || ||| | || |||||||| | || | || || |||| | | Sbjct 86 ATGCAGATCTTTGTGAAGACTCTGACTGGTAAAACCATTACGTTGGAGGTTGAAAGCTCG 145 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 ||||| | || || | || ||||| ||||||||||| |||||||| || || || Sbjct 146 GATACTATTGATAATGTGAAGGCCAAAATCCAAGACAAGGAAGGTATTCCCCCGGACCAG 205 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 ||| | || || || || || || ||| |||||||| || ||| | | || || ||| Sbjct 206 CAAAGACTGATCTTCGCTGGTAAGCAGCTAGAGGATGGACGTACCCTGGCAGACTATAAC 265 Query 22399 ATTCAAAAAGAATCCAC 22415 || ||||| || ||||| Sbjct 266 ATCCAAAAGGAGTCCAC 282 >seq76495 Length=1287 Score = 93.3 bits (102), Expect = 4e-14 Identities = 156/226 (69%), Gaps = 0/226 (0%) Strand=Plus/Plus Query 22220 TGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCG 22279 ||||||||||||| || ||| | || || ||||| ||||| | || || || | | ||| Sbjct 199 TGCAAATTTTTGTCAAGACTCTCACGGGAAAAACCATCACTTTGGAGGTTGAGAGCTCCG 258 Query 22280 ATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAAC 22339 | ||| | ||| || | || ||| || || |||||||| || || ||||| || || | Sbjct 259 ACACCATTGACAATGTGAAGGCAAAGATACAGGACAAGGAAGGCATCCCACCAGACCAGC 318 Query 22340 AACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAACA 22399 | | | || ||||| || || || | || ||| | || | ||| ||||||| Sbjct 319 AGAGGTTGATTTTTGCTGGGAAGCAACTTGAAGATGGTAGGACTCTTGTCGACTACAACA 378 Query 22400 TTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445 ||||||| | || || | || || || ||||| |||| ||||| Sbjct 379 TTCAAAAGAAGTCATCCCTTCACTTGGTGTTGCGTCTGCGTGGAGG 424 Score = 93.3 bits (102), Expect = 4e-14 Identities = 159/231 (69%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || |||||||| || | || || ||||| | || | || ||||| | | | Sbjct 426 ATGCAGATATTTGTTAAGACGCTGACTGGGAAAACCATTACCTTGGAGGTGGAGAGCTCT 485 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 ||||| | || || | ||| ||||| ||||||||||| || ||||| || || || Sbjct 486 GATACTATTGATAATGTGAAAGCTAAAATCCAAGACAAGGAAGGCATTCCCCCAGACCAG 545 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || | | || ||||| || || ||| | |||||| || ||| | | || |||||| Sbjct 546 CAGAGGTTGATCTTTGCTGGTAAGCAGCTGGAGGATGGGCGTACCTTGGCGGACTACAAC 605 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGTTTT 22449 || ||||| || ||||| | ||| | || | || | || || |||||| Sbjct 606 ATCCAAAAGGAGTCCACTCTGCATCTTGTCCTTCGTCTCCGTGGTGGTTTT 656 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 418530926824780