Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Passiflora_20edulis_20[genbank_20GCA_5F002156105.1_202017-05-22] 234,012 sequences; 165,656,733 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq143273 116 9e-21 seq76495 114 3e-20 seq128449 104 5e-17 seq87537 102 2e-16 seq215049 89.7 1e-12 >seq143273 Length=304 Score = 116 bits (128), Expect = 9e-21 Identities = 163/226 (72%), Gaps = 12/226 (5%) Strand=Plus/Minus Query 288255 GAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCG 288314 ||| | ||| || ||||| | ||| || |||||||| |||||||| || || || || Sbjct 304 GAGACGAAGGACAAGATGCAGAGTGGACTCCTTTTGGATGTTATAGTCTGCCAGGGTACG 245 Query 288315 TCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG---ATTCC 288371 ||| || |||| || || || ||||||||||| | || || || ||| || || Sbjct 244 TCCATCCTCTAGCTGCTTACCAGCGAAGATCAGTCTTTGCTGG---TCCGGGGGAATACC 188 Query 288372 TTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGA---TTCTACTTC 288428 ||| || || |||||||| || ||||| || || |||| ||| ||| ||| || || Sbjct 187 TTCCTTGTCTTGGATTTTGGCCTTCACATTATCAATAGTATC---CGAGCTTTCAACCTC 131 Query 288429 GAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474 | ||| || || || || ||||||||||| || || ||||||||| Sbjct 130 CAACGTAATGGTTTTACCAGTCAGAGTCTTCACAAAGATCTGCATT 85 >seq76495 Length=1287 Score = 114 bits (126), Expect = 3e-20 Identities = 178/251 (71%), Gaps = 15/251 (6%) Strand=Plus/Minus Query 288230 TGATGATTCATACATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTT 288289 |||||||| | | | ||||| ||||| | ||| || ||||| | ||| || |||| Sbjct 666 TGATGATTTAAAAA---CCACCACGGAGACGAAGGACAAGATGCAGAGTGGACTCCTTTT 610 Query 288290 GGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGAC 288349 |||| || ||||| || | || || || || || | || || || || ||||||| | Sbjct 609 GGATGTTGTAGTCCGCCAAGGTACGCCCATCCTCCAGCTGCTTACCAGCAAAGATCAACC 550 Query 288350 GCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTA 288406 ||| || |||||| || ||||| || || |||||||| |||||||| || || | Sbjct 549 TCTGCTGG---TCTGGGGGAATGCCTTCCTTGTCTTGGATTTTAGCTTTCACATTATCAA 493 Query 288407 TAGAATC---GCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGA 288463 ||| ||| |||| || || || | || || || ||||| ||||| ||||| || | Sbjct 492 TAGTATCAGAGCTC---TCCACCTCCAAGGTAATGGTTTTCCCAGTCAGCGTCTTAACAA 436 Query 288464 ATATCTGCATT 288474 ||||||||||| Sbjct 435 ATATCTGCATT 425 >seq128449 Length=764 Score = 104 bits (114), Expect = 5e-17 Identities = 140/194 (72%), Gaps = 6/194 (3%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || ||||| || || |||||||| | || | ||| ||||| | || || || || || Sbjct 620 TCCTTTTGAATGTTGTAGTCGGCCAATGTCCTTCCATCTTCAAGCTGCTTGCCGGCAAAT 561 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 ||||| | || || | |||||||||||| || ||||| || ||||| || || || Sbjct 560 ATCAGCCTTTGCTGGTCAGGTGGGATTCCTTCCTTGTCCTGTATCTTCGCCTTAACATTG 501 Query 288403 TCTATAGAATC---GCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 || || | || ||| ||||||||| | ||||| ||||| |||||||| ||||| Sbjct 500 TCGATTGTGTCAGAGCT---TTCTACTTCCAAAGTGATTGTCTTTCCGGTCAGTGTCTTC 444 Query 288460 ACGAATATCTGCAT 288473 || || |||||||| Sbjct 443 ACAAAAATCTGCAT 430 Score = 89.7 bits (98), Expect = 1e-12 Identities = 120/166 (72%), Gaps = 1/166 (1%) Strand=Plus/Minus Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301 |||| ||||| ||||| || || || | || | ||| ||| ||||||||||| || | Sbjct 204 CATG-CCACCACGGAGCCTGAGCACCAAGTGGAGAGTGGATTCCTTTTGGATATTGTAAT 146 Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361 | || || || || || || |||| ||| || || || || || || | ||| || Sbjct 145 CAGCAAGGGTACGGCCATCCTCTAGTTGCTTGCCAGCAAAAATGAGCCTCTGCTGGTCCG 86 Query 288362 CTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTAT 288407 |||||||||||| |||||||| ||||| || ||||| || || || Sbjct 85 GTGGGATTCCTTCCTTATCCTGAATTTTGGCCTTCACATTATCAAT 40 >seq87537 Length=233 Score = 102 bits (112), Expect = 2e-16 Identities = 138/191 (72%), Gaps = 6/191 (3%) Strand=Plus/Minus Query 288286 TTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATC 288345 || ||||| |||||||| || || || || || ||||| | || || ||||| |||||| Sbjct 232 TTCTGGATGTTATAGTCCGCAAGAGTACGCCCATCTTCCAGCTGCTTCCCTGCAAAGATC 173 Query 288346 AGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCT 288405 || | || || ||||| ||||| ||||||||||| || ||||| || || || Sbjct 172 AGCCTTTGCTGGTCCGGCGGGATCCCTTCCTTATCCTGGATCTTGGCTTTAACATTATCA 113 Query 288406 ATAGAATC---GCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || | ||| |||| || || || || ||||| ||||| || || ||||| || || Sbjct 112 ATGGTATCGGAGCTC---TCCACCTCTAGAGTGATGGTCTTTCCCGTTAGAGTTTTCACA 56 Query 288463 AATATCTGCAT 288473 || |||||||| Sbjct 55 AAGATCTGCAT 45 >seq215049 Length=488 Score = 89.7 bits (98), Expect = 1e-12 Identities = 153/220 (70%), Gaps = 4/220 (2%) Strand=Plus/Plus Query 288256 AGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGT 288315 ||||||||||| | ||| | || || || || ||||| ||||| || || ||||| Sbjct 1 AGTCTAAGTACCAAATGGAGAGTAGACTCCTTCTGAATATTGTAGTCCGCAAGTGTGCGG 60 Query 288316 CCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCT 288375 || || || | ||| || || || ||||| || | |||||| ||| || || || Sbjct 61 CCATCCTCAAGTTGCTTCCCAGCAAAGATAAGTCTTTGTTGATCTGGTGGAATGCCCTCC 120 Query 288376 TTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT--ACTTCGAGCG 288433 ||||||||||| || || ||||| || || || | || || | ||| || || | || Sbjct 121 TTATCCTGGATCTTTGCCTTCACATTATCAATTGTAT--CTGAACTCTCAACCTCCAACG 178 Query 288434 TGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 | || || || || || || ||||| || || || ||||| Sbjct 179 TAATAGTTTTTCCCGTGAGGGTCTTCACAAAAATTTGCAT 218 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1176117467280136