Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Passiflora_20edulis_20[genbank_20GCA_5F002156105.1_202017-05-22] 234,012 sequences; 165,656,733 total letters Query= NC_010240.1 Length=169794 Score E Sequences producing significant alignments: (Bits) Value seq128449 102 9e-17 seq76495 98.7 1e-15 seq143273 96.9 4e-15 >seq128449 Length=764 Score = 102 bits (112), Expect = 9e-17 Identities = 157/220 (71%), Gaps = 8/220 (4%) Strand=Plus/Minus Query 41993 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 42052 ||| | |||||||||||| || |||||||| || || || ||||| || || ||| | Sbjct 417 ACGGAGCACCAAATGCAAAGTAGATTCCTTTTGGATGTTATAGTCAGCAAGGGTGCGCCC 358 Query 42053 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTT 42112 || ||||||||||| ||||| || || || | ||||||||| | ||| | || |||||| Sbjct 357 ATCCTCTAGCTGCTTGCCAGCAAAAATTAGCCTCTGCTGGTCTGGTGGGATGCCCTCCTT 298 Query 42113 GTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTC---GCTCGATTCCACATCGACCG 42168 | | ||| | || | || | | | | ||||| ||| ||||| || | | Sbjct 297 AT-CTTGAATCTTGGCCTTCACATTATCAATGGTGTCAGAACTC---TCCACCTCCAAGG 242 Query 42169 TGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 ||||||| ||||| || || || || ||||| |||||||| Sbjct 241 TGATGGTCTTGCCTGTGAGAGTTTTCACAAAAATTTGCAT 202 Score = 86.0 bits (94), Expect = 7e-12 Identities = 96/127 (76%), Gaps = 1/127 (1%) Strand=Plus/Minus Query 41999 CACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATC 42058 |||||| || | ||| |||||||| |||||||||||||| || || || | || || Sbjct 183 CACCAAGTGGAGAGTGGATTCCTTTTGGATATTGTAATCAGCAAGGGTACGGCCATCCTC 124 Query 42059 TAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCAT 42118 ||| ||||| ||||| || ||||| | ||||||||| | ||| | | ||||| ||| | Sbjct 123 TAGTTGCTTGCCAGCAAAAATGAGCCTCTGCTGGTCCGGTGGGATTCCTTCCTTATCC-T 65 Query 42119 GATTTTT 42125 || |||| Sbjct 64 GAATTTT 58 >seq76495 Length=1287 Score = 98.7 bits (108), Expect = 1e-15 Identities = 155/220 (70%), Gaps = 8/220 (4%) Strand=Plus/Minus Query 42005 ATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTG 42064 ||||| ||| ||||||||| || ||||| || |||| || ||| | || || ||||| Sbjct 629 ATGCAGAGTGGACTCCTTTTGGATGTTGTAGTCCGCCAAGGTACGCCCATCCTCCAGCTG 570 Query 42065 CTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTT 42124 ||||||||| || || | | ||||||||| | || | || |||||||| |||||| Sbjct 569 CTTACCAGCAAAGATCAACCTCTGCTGGTCTGGGGGAATGCCTTCCTTGTCTTGGATTTT 510 Query 42125 TTGTTTGAGCGTCGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCC 42181 ||| | | | | || || |||| ||||| || | || |||||||| || Sbjct 509 AGCTTTCACATTATCAATAGTATCAGAGCTC---TCCACCTCCAAGGTAATGGTTTTCCC 453 Query 42182 CGTTAGCGTCTTTACAAAGATTTGCATT--TTCACGCCGA 42219 || |||||||| ||||| || |||||| | ||||| || Sbjct 452 AGTCAGCGTCTTAACAAATATCTGCATTCCTCCACGCAGA 413 Score = 95.1 bits (104), Expect = 1e-14 Identities = 159/229 (69%), Gaps = 6/229 (3%) Strand=Plus/Minus Query 41982 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 42041 ||||| | | |||||||||||| || | | || ||||||||| ||||| || | Sbjct 424 CCTCCACGCAGACGCAACACCAAGTGAAGGGATGACTTCTTTTGAATGTTGTAGTCGACA 365 Query 42042 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGC 42101 ||||||| | || || || ||||| ||||| || || | | ||||||||| | ||| Sbjct 364 AGAGTCCTACCATCTTCAAGTTGCTTCCCAGCAAAAATCAACCTCTGCTGGTCTGGTGGG 305 Query 42102 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTC---GCTCGATTCC 42158 | || ||||||||| || ||| || | | | | ||||| |||| || Sbjct 304 ATGCCTTCCTTGTCCTGTATCTTTGCCTTCACATTGTCAATGGTGTCGGAGCTC---TCA 248 Query 42159 ACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCA 42207 || || | ||||||||||| ||||| || ||||| ||||| ||||||| Sbjct 247 ACCTCCAAAGTGATGGTTTTTCCCGTGAGAGTCTTGACAAAAATTTGCA 199 >seq143273 Length=304 Score = 96.9 bits (106), Expect = 4e-15 Identities = 147/208 (71%), Gaps = 6/208 (3%) Strand=Plus/Minus Query 42005 ATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTG 42064 ||||| ||| ||||||||| || || || || ||||| || || | || |||||||| Sbjct 289 ATGCAGAGTGGACTCCTTTTGGATGTTATAGTCTGCCAGGGTACGTCCATCCTCTAGCTG 230 Query 42065 CTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTT 42124 |||||||||||| || |||| |||||||| | || | | |||||||| |||||| Sbjct 229 CTTACCAGCGAAGATCAGTCTTTGCTGGTCCGGGGGAATACCTTCCTTGTCTTGGATTTT 170 Query 42125 TTGTTTGAGCGTCGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCC 42181 || | | | | || || ||| ||| || || | ||| |||||||| || Sbjct 169 GGCCTTCACATTATCAATAGTATCCGAGCT---TTCAACCTCCAACGTAATGGTTTTACC 113 Query 42182 CGTTAGCGTCTTTACAAAGATTTGCATT 42209 || || ||||| |||||||| |||||| Sbjct 112 AGTCAGAGTCTTCACAAAGATCTGCATT 85 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 541623821078080