Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Passiflora_20edulis_20[genbank_20GCA_5F002156105.1_202017-05-22] 234,012 sequences; 165,656,733 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq128449 122 9e-23 seq18136 93.3 4e-14 seq215049 87.8 2e-12 seq76495 86.0 6e-12 seq30058 82.4 8e-11 >seq128449 Length=764 Score = 122 bits (134), Expect = 9e-23 Identities = 154/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291 ||||| | ||| | || ||||| ||||| ||||| || || || | ||||||| | || Sbjct 413 AGCACCAAATGCAAAGTAGATTCCTTTTGGATGTTATAGTCAGCAAGGGTGCGCCCATCC 354 Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351 || ||||||||||| ||| |||| |||| ||||||||| || || || || || || ||| Sbjct 353 TCTAGCTGCTTGCCAGCAAAAATTAGCCTCTGCTGGTCTGGTGGGATGCCCTCCTTATCT 294 Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411 || || || ||| ||| || | || ||| ||||| || | || | |||| Sbjct 293 TGAATCTTGGCCTTCACATTATCAATGGTGTCAGAACTCTCCACCTCCAAGGTGATGGTC 234 Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 ||||| || | |||||| || ||||||||||| Sbjct 233 TTGCCTGTGAGAGTTTTCACAAAAATTTGCAT 202 Score = 122 bits (134), Expect = 9e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 64217 CCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCG 64276 || || |||| | |||||| | || | || || || |||||||||||||| || || Sbjct 656 CCACCACGCAGGCGAAGCACCAAGTGGAGTGTAGACTCCTTTTGAATGTTGTAGTCGGCC 597 Query 64277 ACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGA 64336 | || | | ||||||||||||||||||||| | || |||| |||||||| || || Sbjct 596 AATGTCCTTCCATCTTCAAGCTGCTTGCCGGCAAATATCAGCCTTTGCTGGTCAGGTGGG 537 Query 64337 ATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACT 64396 |||||||| || || ||||| || ||| ||| || | ||| ||| | || ||| Sbjct 536 ATTCCTTCCTTGTCCTGTATCTTCGCCTTAACATTGTCGATTGTGTCAGAGCTTTCTACT 477 Query 64397 TCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || | ||| | ||||| ||||||| || || || ||||| ||||| Sbjct 476 TCCAAAGTGATTGTCTTTCCGGTCAGTGTCTTCACAAAAATCTGCAT 430 >seq18136 Length=774 Score = 93.3 bits (102), Expect = 4e-14 Identities = 92/119 (77%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 64235 ACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCA 64294 || ||||||| || || ||||| || |||||||| || |||| || || | || || Sbjct 639 ACCAGATGAAGTGTTGACTCTTTCTGGATGTTGTAGTCAGCGAGAGTTCGGCCATCCTCC 580 Query 64295 AGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTG 64353 |||||||||||||| |||| || | ||||||||| ||||| |||||||| || || || Sbjct 579 AGCTGCTTGCCGGCGAAAATCAGTCTCTGCTGGTCTGGAGGGATTCCTTCCTTGTCCTG 521 >seq215049 Length=488 Score = 87.8 bits (96), Expect = 2e-12 Identities = 105/143 (73%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 64217 CCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCG 64276 || || || | || |||||| | || | || || || || || |||||||| || || Sbjct 327 CCACCTCGGAGTCGAAGCACCAAGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGCC 386 Query 64277 ACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGA 64336 | ||| | |||| || |||||||| ||||| | || |||| ||||||||| || ||| Sbjct 387 AAGGTCCTGCCGTCCTCCAGCTGCTTTCCGGCGAAGATCAGCCTCTGCTGGTCCGGGGGA 446 Query 64337 ATTCCTTCTTTTTCTTGTATTTT 64359 |||||||| || ||||| || || Sbjct 447 ATTCCTTCCTTGTCTTGAATCTT 469 >seq76495 Length=1287 Score = 86.0 bits (94), Expect = 6e-12 Identities = 131/187 (70%), Gaps = 0/187 (0%) Strand=Plus/Minus Query 64256 TTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATG 64315 |||||||||||||| || | | || | | |||||||| ||||| || ||| |||| Sbjct 385 TTTTGAATGTTGTAGTCGACAAGAGTCCTACCATCTTCAAGTTGCTTCCCAGCAAAAATC 326 Query 64316 AGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCC 64375 | || ||||||||| || || || ||||| || || ||||| ||| ||| ||| || Sbjct 325 AACCTCTGCTGGTCTGGTGGGATGCCTTCCTTGTCCTGTATCTTTGCCTTCACATTGTCA 266 Query 64376 ACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAA 64435 | || || | || || || | ||| | ||| || || || | ||| || || ||| Sbjct 265 ATGGTGTCGGAGCTCTCAACCTCCAAAGTGATGGTTTTTCCCGTGAGAGTCTTGACAAAA 206 Query 64436 ATTTGCA 64442 ||||||| Sbjct 205 ATTTGCA 199 >seq30058 Length=4835 Score = 82.4 bits (90), Expect = 8e-11 Identities = 111/155 (72%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 64289 TCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTT 64348 |||||||| |||||||||||| | ||||||| || || || || ||||| || || || Sbjct 8 TCTTCAAGTTGCTTGCCGGCAAAGATGAGCCTTTGTTGATCTGGGGGAATACCCTCCTTG 67 Query 64349 TCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACG 64408 || || || || ||||||| || | || || |||||||| | |||| Sbjct 68 TCCTGGATCTTAGCCTTTACATTGTCAATGGTGTCGGAACTTTCCACTTCAAGGGTTATA 127 Query 64409 GTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 ||||| ||||| | |||||| || || |||||||| Sbjct 128 GTCTTTCCGGTAAGAGTTTTCACAAATATTTGCAT 162 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 498183264013280